RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 TMEM44Q2T9K0 475 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 LYPLAL1Q5VWZ2 237 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 SENP6Q9GZR1 1112 aaPredicted RBP8.5□□□□□ -1.05
HTT-208ENST00000510626 EIF4BP23588 611 aaKnown RBP8.5□□□□□ -1.05
HTT-208ENST00000510626 ATP5F1P24539 256 aaPredicted RBP8.5□□□□□ -1.05
HTT-208ENST00000510626 FSCN1Q16658 493 aaKnown RBP8.5□□□□□ -1.05
HTT-208ENST00000510626 GALNTL6Q49A17 601 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 FBXO39Q8N4B4 442 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 ZNF671Q8TAW3 534 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 MASTLQ96GX5 879 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 SIK2Q9H0K1 926 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 DDX43Q9NXZ2 648 aaKnown RBP8.5□□□□□ -1.05
HTT-208ENST00000510626 CENPBD1B2RD01 187 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 H7C4K7 107 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 TMC7Q7Z402 723 aa8.5□□□□□ -1.05
HTT-208ENST00000510626 LBHD1Q9BQE6 289 aaPredicted RBP8.5□□□□□ -1.05
HTT-208ENST00000510626 A0A088AWK7 358 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 ENTPD3O75355 529 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 TM7SF2O76062 418 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 MYCP01106 439 aaPredicted RBP8.49□□□□□ -1.05
HTT-208ENST00000510626 ZNF10P21506 573 aaPredicted RBP8.49□□□□□ -1.05
HTT-208ENST00000510626 BTN2A1Q7KYR7 527 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 GET4Q7L5D6 327 aaPredicted RBP8.49□□□□□ -1.05
HTT-208ENST00000510626 STK32CQ86UX6 486 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 BIRC8Q96P09 236 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 FICDQ9BVA6 458 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 GJB4Q9NTQ9 266 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 IGSF9Q9P2J2 1179 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 DNPEPQ9ULA0 475 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 TEX28O15482 410 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 TTC7BQ86TV6 843 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 SYTL1Q8IYJ3 562 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 NKAPQ8N5F7 415 aaKnown RBP8.49□□□□□ -1.05
HTT-208ENST00000510626 ART4Q93070 314 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 LGALS13Q9UHV8 139 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 THRBP10828 461 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 ERFEQ4G0M1 354 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 SNX32Q86XE0 403 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 RDH12Q96NR8 316 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 CDH19Q9H159 772 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 SUCOQ9UBS9 1254 aaKnown RBP8.49□□□□□ -1.05
HTT-208ENST00000510626 SLC26A2P50443 739 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 NME5P56597 212 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 IFI35P80217 286 aaPredicted RBP8.49□□□□□ -1.05
HTT-208ENST00000510626 PYDC2Q56P42 97 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 PLET1Q6UQ28 207 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 CHST13Q8NET6 341 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 MYBL2P10244 700 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 ELP6Q0PNE2 266 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 ERICH5Q6P6B1 374 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 ZCCHC2Q9C0B9 1178 aaKnown RBP8.49□□□□□ -1.05
HTT-208ENST00000510626 BARX2Q9UMQ3 279 aaPredicted RBP8.49□□□□□ -1.05
HTT-208ENST00000510626 RGL2O15211 777 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 VNN2O95498 520 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 NMT1P30419 496 aaKnown RBP8.49□□□□□ -1.05
HTT-208ENST00000510626 RPL21P46778 160 aaKnown RBP8.49□□□□□ -1.05
HTT-208ENST00000510626 PPP4CP60510 307 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 EMC10Q5UCC4 262 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 IQCKQ8N0W5 287 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 LIMD1Q9UGP4 676 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 TBC1D30Q9Y2I9 924 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 FOXO4P98177 505 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 ANKS6Q68DC2 871 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 CHCHD4Q8N4Q1 142 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 CREB3L1Q96BA8 519 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 POLR1BQ9H9Y6 1135 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 INVSQ9Y283 1065 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 TLL2Q9Y6L7 1015 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 MYBP10242 640 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 SLC16A1P53985 500 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 KCNJ2P63252 427 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 FAM196AQ6ZSG2 479 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 MTMR8Q96EF0 704 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 AFF4Q9UHB7 1163 aaKnown RBP8.49□□□□□ -1.05
HTT-208ENST00000510626 SNX6Q9UNH7 406 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 CFL2Q9Y281 166 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 FAM47E-STBD1D6RA91 191 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 DPYSL4O14531 572 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 DCXO43602 365 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 FUT11Q495W5 492 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 DGKKQ5KSL6 1271 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 MFSD14CQ5VZR4 134 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 ERAP2Q6P179 960 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 ZNF720Q7Z2F6 126 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 UTP15Q8TED0 518 aaKnown RBP8.49□□□□□ -1.05
HTT-208ENST00000510626 MND1Q9BWT6 205 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 ANKRD26Q9UPS8 1709 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 MYH14Q7Z406 1995 aaKnown RBP8.49□□□□□ -1.05
HTT-208ENST00000510626 SEC16AO15027 2179 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 CYP19A1P11511 503 aaPredicted RBP8.49□□□□□ -1.05
HTT-208ENST00000510626 LHX1P48742 406 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 UNC5BQ8IZJ1 945 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 WDCPQ9H6R7 721 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 PTPRUQ92729 1446 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 PORP16435 677 aaPredicted RBP8.49□□□□□ -1.05
HTT-208ENST00000510626 GRIK3Q13003 919 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 NFIL3Q16649 462 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 PLEKHG6Q3KR16 790 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 EPHA10Q5JZY3 1008 aa8.49□□□□□ -1.05
HTT-208ENST00000510626 OTUD3Q5T2D3 398 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms