RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 TKTL2Q9H0I9 626 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 LRMDAQ9H2I8 198 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 KLHL31Q9H511 634 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 KANSL3Q9P2N6 904 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 USP20Q9Y2K6 914 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 A0A0A0MRY4 1105 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 EFCAB10A6NFE3 127 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 LIASO43766 372 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 KPNA6O60684 536 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 RECQL5O94762 991 aaPredicted RBP10.76□□□□□ -0.69
NEK1-206ENST00000510533 KCNH1O95259 989 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 PTPN3P26045 913 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 MAMLD1Q13495 774 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 FAM187BQ17R55 369 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 NEPROQ6NW34 567 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 CACTIN-AS1Q8N1I8 211 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 PCSK9Q8NBP7 692 aaKnown RBP10.76□□□□□ -0.69
NEK1-206ENST00000510533 UXS1Q8NBZ7 420 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 TEKT5Q96M29 485 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 SPATA13Q96N96 652 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 MTMR9Q96QG7 549 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 CCDC3Q9BQI4 270 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 ZCCHC2Q9C0B9 1178 aaKnown RBP10.76□□□□□ -0.69
NEK1-206ENST00000510533 ELOVL4Q9GZR5 314 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 EPB41L4BQ9H329 900 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 SEMA4BQ9NPR2 832 aaPredicted RBP10.76□□□□□ -0.69
NEK1-206ENST00000510533 MRPL39Q9NYK5 338 aaKnown RBP10.76□□□□□ -0.69
NEK1-206ENST00000510533 NFKBIL1Q9UBC1 381 aaPredicted RBP10.76□□□□□ -0.69
NEK1-206ENST00000510533 CRYL1Q9Y2S2 319 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 IPPQ9Y573 584 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 LMTK2Q8IWU2 1503 aa10.76□□□□□ -0.69
NEK1-206ENST00000510533 SIGLEC16A6NMB1 481 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 BTNL10A8MVZ5 291 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 EPN2O95208 641 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 BMP10O95393 424 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 LTA4HP09960 611 aaKnown RBP10.75□□□□□ -0.69
NEK1-206ENST00000510533 TSHRP16473 764 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 IFNGR2P38484 337 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 MMP14P50281 582 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 PPP3CAQ08209 521 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 TIMM50Q3ZCQ8 353 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 INO80DQ53TQ3 878 aaPredicted RBP10.75□□□□□ -0.69
NEK1-206ENST00000510533 PCID2Q5JVF3 399 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 LRRC38Q5VT99 294 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 SYT12Q8IV01 421 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 FBXW8Q8N3Y1 598 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 PROX1Q92786 737 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 TBC1D10AQ9BXI6 508 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 TNPO3Q9Y5L0 923 aaKnown RBP10.75□□□□□ -0.69
NEK1-206ENST00000510533 NCANO14594 1321 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 FGFR1P11362 822 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 CCDC130P13994 396 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 TYMPP19971 482 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 AXLP30530 894 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 MMP13P45452 471 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 PTDSS1P48651 473 aaKnown RBP10.75□□□□□ -0.69
NEK1-206ENST00000510533 ALLCQ8N6M5 410 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 FLCNQ8NFG4 579 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 DNAJB3Q8WWF6 145 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 UBAP1Q9NZ09 502 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 ADAM28Q9UKQ2 775 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 C2CD2Q9Y426 696 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 SLIT1O75093 1534 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 FAM47E-STBD1D6RA91 191 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 CKBP12277 381 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 COX4I1P13073 169 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 SQLEQ14534 574 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 TAB1Q15750 504 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 PDK4Q16654 411 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 ISLR2Q6UXK2 745 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 LGI2Q8N0V4 545 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 MAGEE2Q8TD90 523 aaPredicted RBP10.75□□□□□ -0.69
NEK1-206ENST00000510533 ART4Q93070 314 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 OSBPL6Q9BZF3 934 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 CATSPERZQ9NTU4 200 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 SAE1Q9UBE0 346 aaPredicted RBP10.75□□□□□ -0.69
NEK1-206ENST00000510533 UBA2Q9UBT2 640 aaPredicted RBP10.75□□□□□ -0.69
NEK1-206ENST00000510533 PRKAG3Q9UGI9 489 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 VAV3Q9UKW4 847 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 CHD1O14646 1710 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 SF3B1O75533 1304 aaKnown RBP eCLIP10.75□□□□□ -0.692e-7■■■■■ 58.5
NEK1-206ENST00000510533 H3BMM5 538 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 IL6P05231 212 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 PSMB4P28070 264 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 CLK2P49760 499 aaKnown RBP10.75□□□□□ -0.69
NEK1-206ENST00000510533 IL2P60568 153 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 DLG4P78352 724 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 STK40Q8N2I9 435 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 FBXO30Q8TB52 745 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 KAT5Q92993 513 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 VMP1Q96GC9 406 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 NUAK2Q9H093 628 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 ALG9Q9H6U8 611 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 LRRC19Q9H756 370 aa10.75□□□□□ -0.69
NEK1-206ENST00000510533 CEP170BQ9Y4F5 1589 aaPredicted RBP10.74□□□□□ -0.69
NEK1-206ENST00000510533 A0A0U1RQJ8 604 aa10.74□□□□□ -0.69
NEK1-206ENST00000510533 FAM237AA0A1B0GTK4 181 aa10.74□□□□□ -0.69
NEK1-206ENST00000510533 BCLAF3A2AJT9 711 aaKnown RBP10.74□□□□□ -0.69
NEK1-206ENST00000510533 IGSF6O95976 241 aa10.74□□□□□ -0.69
NEK1-206ENST00000510533 CYP3A4P08684 503 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms