RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 CES2O00748 559 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 KPNA5O15131 536 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 DYRK3O43781 588 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 DGKIO75912 1065 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 PGAM1P18669 254 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 BMP6P22004 513 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 GPR15P49685 360 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 DAB2P98082 770 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 GNA12Q03113 381 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 SPARCL1Q14515 664 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 SUZ12Q15022 739 aaKnown RBP5.22□□□□□ -1.57
PHF3-210ENST00000509876 ACAD11Q709F0 780 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 TAS1R3Q7RTX0 852 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 SZRD1Q7Z422 152 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 DNAAF5Q86Y56 855 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 FAM71BQ8TC56 605 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 HMGB4Q8WW32 186 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 ZNF516Q92618 1163 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 TTC17Q96AE7 1141 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 CXorf40BQ96DE9 158 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 RNF157Q96PX1 679 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 MCCC1Q96RQ3 725 aaPredicted RBP5.22□□□□□ -1.57
PHF3-210ENST00000509876 ABCG4Q9H172 646 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 ABCB8Q9NUT2 735 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 TAS2R14Q9NYV8 317 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 PSMC3IPQ9P2W1 217 aaPredicted RBP5.22□□□□□ -1.57
PHF3-210ENST00000509876 TELO2Q9Y4R8 837 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 HGSO14964 777 aaPredicted RBP5.22□□□□□ -1.57
PHF3-210ENST00000509876 FSBPO95073 299 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 HOXD8P13378 290 aaPredicted RBP5.22□□□□□ -1.57
PHF3-210ENST00000509876 MMP8P22894 467 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 GTF2F1P35269 517 aaKnown RBP eCLIP5.22□□□□□ -1.572e-6■■■□□ 17.2
PHF3-210ENST00000509876 RASSF2P50749 326 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 MRPS25P82663 173 aaKnown RBP5.22□□□□□ -1.57
PHF3-210ENST00000509876 WASHC5Q12768 1159 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 AUHQ13825 339 aaKnown RBP5.22□□□□□ -1.57
PHF3-210ENST00000509876 FAM83EQ2M2I3 478 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 TMEM240Q5SV17 173 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 LHX8Q68G74 356 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.22□□□□□ -1.57
PHF3-210ENST00000509876 PTAR1Q7Z6K3 402 aaPredicted RBP5.22□□□□□ -1.57
PHF3-210ENST00000509876 TRAPPC5Q8IUR0 188 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 SCAMP5Q8TAC9 235 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 MRPL38Q96DV4 380 aaKnown RBP5.22□□□□□ -1.57
PHF3-210ENST00000509876 SERAC1Q96JX3 654 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 COPS7BQ9H9Q2 264 aaPredicted RBP5.22□□□□□ -1.57
PHF3-210ENST00000509876 IARS2Q9NSE4 1012 aaKnown RBP5.22□□□□□ -1.57
PHF3-210ENST00000509876 WHRNQ9P202 907 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 ZNHIT2Q9UHR6 403 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 COL4A5P29400 1685 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 A0A0A0MRY4 1105 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 TMEM189-UBE2V1I3L0A0 370 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 GSTA4O15217 222 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 OAZ2O95190 189 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 PRLRP16471 622 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 AMD1P17707 334 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 MAGEA4P43358 317 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 LIG3P49916 1009 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 RAP1GDS1P52306 607 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 SPANXN3Q5MJ09 141 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 UBXN11Q5T124 520 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 ADGRF1Q5T601 910 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 SCARA3Q6AZY7 606 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 ZC3H14Q6PJT7 736 aaKnown RBP5.22□□□□□ -1.57
PHF3-210ENST00000509876 EFL1Q7Z2Z2 1120 aaKnown RBP5.22□□□□□ -1.57
PHF3-210ENST00000509876 ZNF438Q7Z4V0 828 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 CMTM8Q8IZV2 173 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 C12orf76Q8N812 135 aaPredicted RBP5.22□□□□□ -1.57
PHF3-210ENST00000509876 FNIP1Q8TF40 1166 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 ATG4AQ8WYN0 398 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 NDRG1Q92597 394 aaKnown RBP5.22□□□□□ -1.57
PHF3-210ENST00000509876 SPATA13Q96N96 652 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 SEMA3CQ99985 751 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 ERP44Q9BS26 406 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 EPC1Q9H2F5 836 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 FANCEQ9HB96 536 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 GKN1Q9NS71 199 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 GNPTGQ9UJJ9 305 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 USP27XA6NNY8 438 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 SYCE1LA8MT33 242 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 HMGB1P1B2RPK0 211 aaPredicted RBP5.22□□□□□ -1.57
PHF3-210ENST00000509876 NDUFAB1O14561 156 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 EIF3HO15372 352 aaKnown RBP eCLIP5.22□□□□□ -1.572e-6■■■□□ 16.4
PHF3-210ENST00000509876 CYP11A1P05108 521 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 GJA1P17302 382 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 ERCC2P18074 760 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 PROZP22891 400 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 INCA1Q0VD86 236 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 POU6F1Q14863 301 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 TMTC4Q5T4D3 741 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 MFSD4BQ5TF39 518 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 AGAP9Q5VTM2 703 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 AFTPHQ6ULP2 937 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 VITQ6UXI7 678 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 MON1BQ7L1V2 547 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 ZNF655Q8N720 491 aaPredicted RBP5.22□□□□□ -1.57
PHF3-210ENST00000509876 STMN2Q93045 179 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 SHISA4Q96DD7 197 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 HAPLN3Q96S86 360 aa5.22□□□□□ -1.57
PHF3-210ENST00000509876 APOL2Q9BQE5 337 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms