RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 SRGAP2O75044 1071 aa15.79■□□□□ 0.12
TPM3-219ENST00000509409 LDOC1O95751 146 aaPredicted RBP15.79■□□□□ 0.12
TPM3-219ENST00000509409 TFE3P19532 575 aaPredicted RBP15.79■□□□□ 0.12
TPM3-219ENST00000509409 PPP2CBP62714 309 aa15.79■□□□□ 0.12
TPM3-219ENST00000509409 PPP2CAP67775 309 aa15.79■□□□□ 0.12
TPM3-219ENST00000509409 CNTN1Q12860 1018 aa15.79■□□□□ 0.12
TPM3-219ENST00000509409 STAT4Q14765 748 aa15.79■□□□□ 0.12
TPM3-219ENST00000509409 C5orf22Q49AR2 442 aa15.79■□□□□ 0.12
TPM3-219ENST00000509409 GALNT15Q8N3T1 639 aa15.79■□□□□ 0.12
TPM3-219ENST00000509409 SH2D3CQ8N5H7 860 aa15.79■□□□□ 0.12
TPM3-219ENST00000509409 TBCBQ99426 244 aa15.79■□□□□ 0.12
TPM3-219ENST00000509409 C2orf49Q9BVC5 232 aaPredicted RBP15.79■□□□□ 0.12
TPM3-219ENST00000509409 SAMSN1Q9NSI8 373 aaKnown RBP15.79■□□□□ 0.12
TPM3-219ENST00000509409 TMEM51Q9NW97 253 aa15.79■□□□□ 0.12
TPM3-219ENST00000509409 PPM1HQ9ULR3 514 aa15.79■□□□□ 0.12
TPM3-219ENST00000509409 TBC1D30Q9Y2I9 924 aa15.79■□□□□ 0.12
TPM3-219ENST00000509409 OR51B4Q9Y5P0 310 aa15.79■□□□□ 0.12
TPM3-219ENST00000509409 ALOX15BO15296 676 aa15.78■□□□□ 0.12
TPM3-219ENST00000509409 SLC7A4O43246 635 aa15.78■□□□□ 0.12
TPM3-219ENST00000509409 SNAP91O60641 907 aa15.78■□□□□ 0.12
TPM3-219ENST00000509409 MT-CO1P00395 513 aa15.78■□□□□ 0.12
TPM3-219ENST00000509409 CDH5P33151 784 aaPredicted RBP15.78■□□□□ 0.12
TPM3-219ENST00000509409 GABRB2P47870 512 aa15.78■□□□□ 0.12
TPM3-219ENST00000509409 ARRB1P49407 418 aaPredicted RBP15.78■□□□□ 0.12
TPM3-219ENST00000509409 SLC25A52Q3SY17 297 aa15.78■□□□□ 0.12
TPM3-219ENST00000509409 ALFQ53S48 1182 aa15.78■□□□□ 0.12
TPM3-219ENST00000509409 C2CD6Q53TS8 623 aa15.78■□□□□ 0.12
TPM3-219ENST00000509409 NAPEPLDQ6IQ20 393 aa15.78■□□□□ 0.12
TPM3-219ENST00000509409 DPY19L2P1Q6NXN4 242 aa15.78■□□□□ 0.12
TPM3-219ENST00000509409 TFAP2DQ7Z6R9 452 aa15.78■□□□□ 0.12
TPM3-219ENST00000509409 PROSER1Q86XN7 944 aa15.78■□□□□ 0.12
TPM3-219ENST00000509409 XYLT1Q86Y38 959 aa15.78■□□□□ 0.12
TPM3-219ENST00000509409 MARCH9Q86YJ5 346 aa15.78■□□□□ 0.12
TPM3-219ENST00000509409 MDM1Q8TC05 714 aa15.78■□□□□ 0.12
TPM3-219ENST00000509409 CPA5Q8WXQ8 436 aa15.78■□□□□ 0.12
TPM3-219ENST00000509409 CCDC114Q96M63 670 aa15.78■□□□□ 0.12
TPM3-219ENST00000509409 SPON2Q9BUD6 331 aa15.78■□□□□ 0.12
TPM3-219ENST00000509409 STK33Q9BYT3 514 aa15.78■□□□□ 0.12
TPM3-219ENST00000509409 ANLNQ9NQW6 1124 aa15.78■□□□□ 0.12
TPM3-219ENST00000509409 DYRK4Q9NR20 520 aa15.78■□□□□ 0.12
TPM3-219ENST00000509409 MPP6Q9NZW5 540 aa15.78■□□□□ 0.12
TPM3-219ENST00000509409 DRGXA6NNA5 263 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 KPNA3O00505 521 aaPredicted RBP15.77■□□□□ 0.12
TPM3-219ENST00000509409 ENC1O14682 589 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 YKT6O15498 198 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 PLRG1O43660 514 aaKnown RBP15.77■□□□□ 0.12
TPM3-219ENST00000509409 MAGEC1O60732 1142 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 TPM2P07951 284 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 SRCP12931 536 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 UCHL3P15374 230 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 RRM1P23921 792 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 OR1E1P30953 314 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 CHRNA3P32297 505 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 NUDT1P36639 197 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 SCNN1AP37088 669 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 NXPH1P58417 271 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 CCDC15Q0P6D6 951 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 BNIP3Q12983 259 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 TCP11X2Q5H9J9 407 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 C6orf118Q5T5N4 469 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 ACBD5Q5T8D3 534 aaPredicted RBP15.77■□□□□ 0.12
TPM3-219ENST00000509409 OTUD1Q5VV17 481 aaPredicted RBP15.77■□□□□ 0.12
TPM3-219ENST00000509409 DHRS13Q6UX07 377 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 SETD3Q86TU7 594 aaPredicted RBP15.77■□□□□ 0.12
TPM3-219ENST00000509409 EID2Q8N6I1 236 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 MFSD2AQ8NA29 543 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 NT5C3BQ969T7 300 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 PGAP3Q96FM1 320 aaPredicted RBP15.77■□□□□ 0.12
TPM3-219ENST00000509409 CNDP2Q96KP4 475 aaKnown RBP15.77■□□□□ 0.12
TPM3-219ENST00000509409 C1orf74Q96LT6 269 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 PSMB7Q99436 277 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 TMPRSS4Q9NRS4 437 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 TAB2Q9NYJ8 693 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 ARHGAP20Q9P2F6 1191 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 VPS51Q9UID3 782 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 LHX6Q9UPM6 363 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 CABIN1Q9Y6J0 2220 aa15.77■□□□□ 0.12
TPM3-219ENST00000509409 A0A0D9SEW6 157 aa15.76■□□□□ 0.11
TPM3-219ENST00000509409 FAM149AA5PLN7 773 aa15.76■□□□□ 0.11
TPM3-219ENST00000509409 E9PAM4 449 aa15.76■□□□□ 0.11
TPM3-219ENST00000509409 K7ERQ8 282 aa15.76■□□□□ 0.11
TPM3-219ENST00000509409 LATO43561 262 aa15.76■□□□□ 0.11
TPM3-219ENST00000509409 DKK1O94907 266 aa15.76■□□□□ 0.11
TPM3-219ENST00000509409 ENDOD1O94919 500 aa15.76■□□□□ 0.11
TPM3-219ENST00000509409 LSM8O95777 96 aaKnown RBP15.76■□□□□ 0.11
TPM3-219ENST00000509409 CAPNS1P04632 268 aa15.76■□□□□ 0.11
TPM3-219ENST00000509409 MMEP08473 750 aa15.76■□□□□ 0.11
TPM3-219ENST00000509409 EEF1GP26641 437 aaKnown RBP15.76■□□□□ 0.11
TPM3-219ENST00000509409 RECQLP46063 649 aaPredicted RBP15.76■□□□□ 0.11
TPM3-219ENST00000509409 SHBQ15464 509 aa15.76■□□□□ 0.11
TPM3-219ENST00000509409 SETMARQ53H47 684 aaPredicted RBP15.76■□□□□ 0.11
TPM3-219ENST00000509409 CT47A1Q5JQC4 288 aaPredicted RBP15.76■□□□□ 0.11
TPM3-219ENST00000509409 AGBL4Q5VU57 503 aa15.76■□□□□ 0.11
TPM3-219ENST00000509409 NAA35Q5VZE5 725 aa15.76■□□□□ 0.11
TPM3-219ENST00000509409 C19orf48Q6RUI8 117 aa15.76■□□□□ 0.11
TPM3-219ENST00000509409 LINGO4Q6UY18 593 aa15.76■□□□□ 0.11
TPM3-219ENST00000509409 NOP9Q86U38 636 aaKnown RBP15.76■□□□□ 0.11
TPM3-219ENST00000509409 OXR1Q8N573 874 aa15.76■□□□□ 0.11
TPM3-219ENST00000509409 SAP25Q8TEE9 199 aa15.76■□□□□ 0.11
TPM3-219ENST00000509409 CFAP57Q96MR6 1250 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms