RNA–Protein interactions for RNA: ENST00000509177.1

TUSC3-208, Transcript of tumor suppressor candidate 3, human

TSL 2

Gene TUSC3, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-208	ENST00000509177	BNC1	Q01954	994 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	ARID5B	Q14865	1188 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	CDO1	Q16878	200 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	ACBD5	Q5T8D3	534 aa	Predicted RBP	11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	CXorf57	Q6NSI4	855 aa	Known RBP	11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	IL27RA	Q6UWB1	636 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	USP30	Q70CQ3	517 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	ADAT2	Q7Z6V5	191 aa	Known RBP	11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	DSG4	Q86SJ6	1040 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	FAM131B	Q86XD5	332 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	MARCH9	Q86YJ5	346 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	BAHD1	Q8TBE0	780 aa	Predicted RBP	11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	NT5C3B	Q969T7	300 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	PGAP3	Q96FM1	320 aa	Predicted RBP	11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	LRIG1	Q96JA1	1093 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	CFAP57	Q96MR6	1250 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	C11orf70	Q9BRQ4	267 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	METTL5	Q9NRN9	209 aa	Known RBP	11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	TOR4A	Q9NXH8	423 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	NOCT	Q9UK39	431 aa	Known RBP	11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	FNDC3A	Q9Y2H6	1198 aa	Known RBP	11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	SIK3	Q9Y2K2	1263 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	SNX10	Q9Y5X0	201 aa		11.14	□□□□□ -0.63
TUSC3-208	ENST00000509177	ITIH6	Q6UXX5	1313 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	SMTNL1	A8MU46	457 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	CNTN5	O94779	1100 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	DKK1	O94907	266 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	CER1	O95813	267 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	ADH1B	P00325	375 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	CYP1A1	P04798	512 aa	Predicted RBP	11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	CCDC172	P0C7W6	258 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	GOT1	P17174	413 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	CHRNB2	P17787	502 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	C5AR1	P21730	350 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	MMP8	P22894	467 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	CSNK1E	P49674	416 aa	Known RBP	11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	AFF3	P51826	1226 aa	Known RBP	11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	FMO1	Q01740	532 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	ELAVL3	Q14576	367 aa	Known RBP	11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	DLG2	Q15700	870 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	ARL13B	Q3SXY8	428 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	ANO6	Q4KMQ2	910 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	FILIP1L	Q4L180	1135 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	OTUD1	Q5VV17	481 aa	Predicted RBP	11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	FAM46C	Q5VWP2	391 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	TMPRSS7	Q7RTY8	843 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	TFAP2D	Q7Z6R9	452 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	EMC1	Q8N766	993 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	SETD7	Q8WTS6	366 aa	Known RBP	11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	RXFP2	Q8WXD0	754 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	OR8D1	Q8WZ84	308 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	PTPRN2	Q92932	1015 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	BIRC7	Q96CA5	298 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	C1orf74	Q96LT6	269 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	FAM129B	Q96TA1	746 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	C2orf49	Q9BVC5	232 aa	Predicted RBP	11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	NEUROG2	Q9H2A3	272 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	GAREM1	Q9H706	876 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	SCUBE2	Q9NQ36	999 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	TMPRSS4	Q9NRS4	437 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	MPP6	Q9NZW5	540 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	ADAM22	Q9P0K1	906 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	TMEM63C	Q9P1W3	806 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	TMEM59L	Q9UK28	342 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	TBC1D30	Q9Y2I9	924 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	CKAP5	Q14008	2032 aa		11.13	□□□□□ -0.63
TUSC3-208	ENST00000509177	GOLGA4	Q13439	2230 aa	Known RBP	11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	CFAP46	Q8IYW2	2715 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177		A0A1B0GVT2	93 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	ANKRD62	A6NC57	917 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	LRRC10B	A6NIK2	292 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177		E9PAM4	449 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	ZIC2	O95409	532 aa	Predicted RBP	11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	CALB1	P05937	261 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	ATXN1L	P0C7T5	689 aa	Known RBP	11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	ZNF883	P0CG24	379 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	KRT3	P12035	628 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	ATP1A3	P13637	1013 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	VAV1	P15498	845 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	CD27	P26842	260 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	OR1E1	P30953	314 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	GALC	P54803	685 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	NCAPH	Q15003	741 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	CLEC16A	Q2KHT3	1053 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	HLA-B	Q31612	363 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	C5orf22	Q49AR2	442 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	ALF	Q53S48	1182 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	C6orf118	Q5T5N4	469 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	KIAA0895L	Q68EN5	471 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	CAVIN1	Q6NZI2	390 aa	Known RBP	11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	NCEH1	Q6PIU2	408 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	DBX2	Q6ZNG2	339 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	ARC	Q7LC44	396 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	SETD3	Q86TU7	594 aa	Predicted RBP	11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	ATP11C	Q8NB49	1132 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	OR2T34	Q8NGX1	318 aa		11.12	□□□□□ -0.63
TUSC3-208	ENST00000509177	OR14C36	Q8NHC7	312 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms