RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 N4BP1O75113 896 aaKnown RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 TRIM3O75382 744 aaPredicted RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 PIAS2O75928 621 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 HEXIM1O94992 359 aaKnown RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 SYF2O95926 243 aaKnown RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 GOLGA8HP0CJ92 632 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 CDH2P19022 906 aaPredicted RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 EEF1B2P24534 225 aaKnown RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 ITGA3P26006 1051 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 GSTM2P28161 218 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 ABCD3P28288 659 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 ADORA1P30542 326 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 ECE1P42892 770 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 RNF144AP50876 292 aaPredicted RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 USP14P54578 494 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 PRKAA2P54646 552 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 OSTNP61366 133 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 KHDRBS1Q07666 443 aaKnown RBP eCLIP4□□□□□ -1.77
NEDD4-209ENST00000508871 IL10RAQ13651 578 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 TOB2Q14106 344 aaPredicted RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 TRIP4Q15650 581 aaPredicted RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 Q3ZCU0 254 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 SLC6A19Q695T7 634 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 ABRAXAS1Q6UWZ7 409 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 XKR5Q6UX68 686 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 CCDC25Q86WR0 208 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 FBXO11Q86XK2 927 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 GLB1L2Q8IW92 636 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 SPAG16Q8N0X2 631 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 RNF10Q8N5U6 811 aaKnown RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 CNBD1Q8NA66 436 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 CAMKVQ8NCB2 501 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 ZCCHC14Q8WYQ9 949 aaKnown RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 VCX2Q9H322 139 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 ATP13A1Q9HD20 1204 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 GPRC5CQ9NQ84 441 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 MINPP1Q9UNW1 487 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 TMEM98Q9Y2Y6 226 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 SIPA1L1O43166 1804 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 TRBC2A0A5B9 178 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 UBA6A0AVT1 1052 aaPredicted RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 POLRMTO00411 1230 aaKnown RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 ARHGEF9O43307 516 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 PET100P0DJ07 73 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 IL1R1P14778 569 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 PDHA2P29803 388 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 FASLGP48023 281 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 IRAK1P51617 712 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 ART3Q13508 389 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 KLHL40Q2TBA0 621 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 SBK1Q52WX2 424 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 SCYL2Q6P3W7 929 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 ARHGAP11AQ6P4F7 1023 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 EFL1Q7Z2Z2 1120 aaKnown RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 MOGAT3Q86VF5 341 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 MISPQ8IVT2 679 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 SP8Q8IXZ3 490 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 MB21D2Q8IYB1 491 aaPredicted RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 RTKN2Q8IZC4 609 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 MTURNQ8N3F0 131 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 SYT2Q8N9I0 419 aaPredicted RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 PNPT1Q8TCS8 783 aaKnown RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 CEP95Q96GE4 821 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 SNX27Q96L92 541 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 HARBI1Q96MB7 349 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 TSSK1BQ9BXA7 367 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 KIAA1683Q9H0B3 1180 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 DNAJC18Q9H819 358 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 FBXO28Q9NVF7 368 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 CTTNBP2NLQ9P2B4 639 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 CACNG4Q9UBN1 327 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 TELO2Q9Y4R8 837 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 SNED1Q8TER0 1413 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 LOC285556D6RIA3 1793 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 SUPT3HB4E1H0 165 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 E7EWF7 191 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 KIF2AO00139 706 aaPredicted RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 TRIM16O95361 564 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 STAG3L3P0CL85 134 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 ALDH1B1P30837 517 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 TTKP33981 857 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 NAPAP54920 295 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 COG7P83436 770 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 BNC1Q01954 994 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 SCARF1Q14162 830 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 STK11Q15831 433 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 MSS51Q4VC12 460 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 FAM47AQ5JRC9 791 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 BORAQ6PGQ7 559 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 ICA1LQ8NDH6 482 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 BEST2Q8NFU1 509 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 IPMKQ8NFU5 416 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 LZICQ8WZA0 190 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 THOC1Q96FV9 657 aaKnown RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 IL25Q9H293 177 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 PDE7BQ9NP56 450 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 BZW2Q9Y6E2 419 aaKnown RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 MYO3BQ8WXR4 1341 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 LCHNA4D1U4 455 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 ATP2C2O75185 946 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms