RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 LRRN4Q8WUT4 740 aa10.59□□□□□ -0.71
PTPN20-220ENST00000508715 RPL10LQ96L21 214 aaKnown RBP10.59□□□□□ -0.71
PTPN20-220ENST00000508715 LRFN3Q9BTN0 628 aa10.59□□□□□ -0.71
PTPN20-220ENST00000508715 MAGEH1Q9H213 219 aa10.59□□□□□ -0.71
PTPN20-220ENST00000508715 TMEM245Q9H330 911 aa10.59□□□□□ -0.71
PTPN20-220ENST00000508715 CATSPERBQ9H7T0 1116 aa10.59□□□□□ -0.71
PTPN20-220ENST00000508715 CACNA2D2Q9NY47 1150 aa10.59□□□□□ -0.71
PTPN20-220ENST00000508715 DDX56Q9NY93 547 aaKnown RBP10.59□□□□□ -0.71
PTPN20-220ENST00000508715 AMFRQ9UKV5 643 aa10.59□□□□□ -0.71
PTPN20-220ENST00000508715 ERVW-1Q9UQF0 538 aa10.59□□□□□ -0.71
PTPN20-220ENST00000508715 WDFY4Q6ZS81 3184 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 A0A1W2PQF6 199 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 CCDC66A2RUB6 948 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 PRR33A8MZF0 331 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 J3KR12 359 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 RAMP2O60895 175 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 MAP3K6O95382 1288 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 KLF8O95600 359 aaPredicted RBP10.58□□□□□ -0.72
PTPN20-220ENST00000508715 PEX11BO96011 259 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 DLDP09622 509 aaKnown RBP10.58□□□□□ -0.72
PTPN20-220ENST00000508715 SRCP12931 536 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 TDGF1P13385 188 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 VAV1P15498 845 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 POLR2EP19388 210 aaKnown RBP10.58□□□□□ -0.72
PTPN20-220ENST00000508715 PRKCHP24723 683 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 YBEYP58557 167 aaPredicted RBP10.58□□□□□ -0.72
PTPN20-220ENST00000508715 SATB1Q01826 763 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 ZNF211Q13398 564 aaPredicted RBP10.58□□□□□ -0.72
PTPN20-220ENST00000508715 SERINC3Q13530 473 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 POLD3Q15054 466 aaPredicted RBP10.58□□□□□ -0.72
PTPN20-220ENST00000508715 IFI16Q16666 785 aaKnown RBP10.58□□□□□ -0.72
PTPN20-220ENST00000508715 C6orf118Q5T5N4 469 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 KIAA1211LQ6NV74 962 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 LINGO4Q6UY18 593 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 ZNF783Q6ZMS7 281 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 LEKR1Q6ZMV7 388 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 RCOR2Q8IZ40 523 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 SYCE1Q8N0S2 351 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 SLC35F6Q8N357 371 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 ZNF557Q8N988 423 aaPredicted RBP10.58□□□□□ -0.72
PTPN20-220ENST00000508715 DCAF4L2Q8NA75 395 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 TXNDC5Q8NBS9 432 aaKnown RBP10.58□□□□□ -0.72
PTPN20-220ENST00000508715 FRS2Q8WU20 508 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 ZNF419Q96HQ0 510 aaPredicted RBP10.58□□□□□ -0.72
PTPN20-220ENST00000508715 GABRG3Q99928 467 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 CIPCQ9C0C6 399 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 MUC3BQ9H195 1237 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 PDFQ9HBH1 243 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 ATP13A1Q9HD20 1204 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 VPS28Q9UK41 221 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 RAD54BQ9Y620 910 aa10.58□□□□□ -0.72
PTPN20-220ENST00000508715 LRRK1Q38SD2 2015 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 GPR179Q6PRD1 2367 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 TCRBV7S2A1N4TA0A589 114 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 TTC34A8MYJ7 566 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 MIF4GDA9UHW6 222 aaKnown RBP10.57□□□□□ -0.72
PTPN20-220ENST00000508715 K7ESF4 209 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 RNF103O00237 685 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 DAPK3O43293 454 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 ZSCAN12O43309 604 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 TIMM44O43615 452 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 KDELR3O43731 214 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 MAFKO60675 156 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 ZRANB2O95218 330 aaKnown RBP eCLIP10.57□□□□□ -0.72
PTPN20-220ENST00000508715 PECAM1P16284 738 aaPredicted RBP10.57□□□□□ -0.72
PTPN20-220ENST00000508715 VASPP50552 380 aaPredicted RBP10.57□□□□□ -0.72
PTPN20-220ENST00000508715 PAPOLAP51003 745 aaKnown RBP10.57□□□□□ -0.72
PTPN20-220ENST00000508715 DNA2P51530 1060 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 NDST2P52849 883 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 RWDD2BP57060 319 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 ECT2LQ008S8 904 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 LRRC32Q14392 662 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 TMCO3Q6UWJ1 677 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 MAMSTRQ6ZN01 415 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 SPEM1Q8N4L4 309 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 SH2D3CQ8N5H7 860 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 KCNV2Q8TDN2 545 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 PTPRN2Q92932 1015 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 ERLEC1Q96DZ1 483 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 NSMCE3Q96MG7 304 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 OLFM3Q96PB7 478 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 WDR24Q96S15 920 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 SPON2Q9BUD6 331 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 DTLQ9NZJ0 730 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 SAE1Q9UBE0 346 aaPredicted RBP10.57□□□□□ -0.72
PTPN20-220ENST00000508715 MMP17Q9ULZ9 603 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 HS3ST2Q9Y278 367 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 STON1Q9Y6Q2 735 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 KNL1Q8NG31 2342 aa10.57□□□□□ -0.72
PTPN20-220ENST00000508715 DMDP11532 3685 aa10.56□□□□□ -0.72
PTPN20-220ENST00000508715 CBX4O00257 560 aa10.56□□□□□ -0.72
PTPN20-220ENST00000508715 ENC1O14682 589 aa10.56□□□□□ -0.72
PTPN20-220ENST00000508715 NCAM2O15394 837 aa10.56□□□□□ -0.72
PTPN20-220ENST00000508715 ATP9BO43861 1147 aa10.56□□□□□ -0.72
PTPN20-220ENST00000508715 CST8O60676 142 aa10.56□□□□□ -0.72
PTPN20-220ENST00000508715 PRAMEF11O60813 436 aa10.56□□□□□ -0.72
PTPN20-220ENST00000508715 ASLP04424 464 aa10.56□□□□□ -0.72
PTPN20-220ENST00000508715 ATP5BP06576 529 aaKnown RBP10.56□□□□□ -0.72
PTPN20-220ENST00000508715 SRPRAP08240 638 aaKnown RBP10.56□□□□□ -0.72
PTPN20-220ENST00000508715 C7P10643 843 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms