RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 RNF144BQ7Z419 303 aa5.75□□□□□ -1.49
TOPBP1-206ENST00000508524 IGFN1Q86VF2 1251 aa5.75□□□□□ -1.49
TOPBP1-206ENST00000508524 CCDC117Q8IWD4 279 aaPredicted RBP5.75□□□□□ -1.49
TOPBP1-206ENST00000508524 FAM217AQ8IXS0 508 aa5.75□□□□□ -1.49
TOPBP1-206ENST00000508524 GABPB2Q8TAK5 448 aaPredicted RBP5.75□□□□□ -1.49
TOPBP1-206ENST00000508524 OTUD7AQ8TE49 926 aaPredicted RBP5.75□□□□□ -1.49
TOPBP1-206ENST00000508524 C3orf49Q96BT1 292 aa5.75□□□□□ -1.49
TOPBP1-206ENST00000508524 DDX23Q9BUQ8 820 aaKnown RBP5.75□□□□□ -1.49
TOPBP1-206ENST00000508524 SF3B5Q9BWJ5 86 aaKnown RBP5.75□□□□□ -1.49
TOPBP1-206ENST00000508524 B3GNT4Q9C0J1 378 aa5.75□□□□□ -1.49
TOPBP1-206ENST00000508524 KRCC1Q9NPI7 259 aaPredicted RBP5.75□□□□□ -1.49
TOPBP1-206ENST00000508524 NDUFAF4Q9P032 175 aa5.75□□□□□ -1.49
TOPBP1-206ENST00000508524 AQRO60306 1485 aaKnown RBP eCLIP5.75□□□□□ -1.49
TOPBP1-206ENST00000508524 CFTRP13569 1480 aa5.75□□□□□ -1.49
TOPBP1-206ENST00000508524 BECN2A8MW95 431 aa5.74□□□□□ -1.49
TOPBP1-206ENST00000508524 SLC28A2O43868 658 aa5.74□□□□□ -1.49
TOPBP1-206ENST00000508524 LYL1P12980 280 aa5.74□□□□□ -1.49
TOPBP1-206ENST00000508524 RFX5P48382 616 aaPredicted RBP5.74□□□□□ -1.49
TOPBP1-206ENST00000508524 OAZ1P54368 228 aa5.74□□□□□ -1.49
TOPBP1-206ENST00000508524 SELENOVP59797 346 aa5.74□□□□□ -1.49
TOPBP1-206ENST00000508524 TRAF1Q13077 416 aa5.74□□□□□ -1.49
TOPBP1-206ENST00000508524 ZNF585BQ52M93 769 aa5.74□□□□□ -1.49
TOPBP1-206ENST00000508524 C1orf228Q6PIY5 440 aa5.74□□□□□ -1.49
TOPBP1-206ENST00000508524 RRAGAQ7L523 313 aa5.74□□□□□ -1.49
TOPBP1-206ENST00000508524 SCN4BQ8IWT1 228 aa5.74□□□□□ -1.49
TOPBP1-206ENST00000508524 FAM185AQ8N0U4 392 aa5.74□□□□□ -1.49
TOPBP1-206ENST00000508524 VPS52Q8N1B4 723 aa5.74□□□□□ -1.49
TOPBP1-206ENST00000508524 POF1BQ8WVV4 589 aa5.74□□□□□ -1.49
TOPBP1-206ENST00000508524 ARRDC3Q96B67 414 aa5.74□□□□□ -1.49
TOPBP1-206ENST00000508524 KRTAP2-2Q9BYT5 123 aa5.74□□□□□ -1.49
TOPBP1-206ENST00000508524 HIPK3Q9H422 1215 aa5.74□□□□□ -1.49
TOPBP1-206ENST00000508524 ZDHHC7Q9NXF8 308 aa5.74□□□□□ -1.49
TOPBP1-206ENST00000508524 PLK2Q9NYY3 685 aa5.74□□□□□ -1.49
TOPBP1-206ENST00000508524 SLC25A13Q9UJS0 675 aa5.74□□□□□ -1.49
TOPBP1-206ENST00000508524 DAAM1Q9Y4D1 1078 aa5.74□□□□□ -1.49
TOPBP1-206ENST00000508524 IFT140Q96RY7 1462 aa5.74□□□□□ -1.49
TOPBP1-206ENST00000508524 TRIP12Q14669 1992 aaPredicted RBP5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 CCDC194A0A1B0GVG4 234 aa5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 C4orf47A7E2U8 309 aa5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 HNRNPRO43390 633 aaKnown RBP5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 LCATP04180 440 aa5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 ARSBP15848 533 aa5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 CHRNB2P17787 502 aa5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 CYP2J2P51589 502 aa5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 ROR2Q01974 943 aaKnown RBP5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 FOXO1Q12778 655 aa5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 ALKBH1Q13686 389 aaKnown RBP5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 BLMHQ13867 455 aa5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 GXYLT1Q4G148 440 aa5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 FAM171A1Q5VUB5 890 aa5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 RINLQ6ZS11 566 aa5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 Q6ZTK2 550 aa5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 TRILQ7L0X0 811 aa5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 SPICE1Q8N0Z3 855 aa5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 PRR26Q8N8Z3 221 aa5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 LRRC57Q8N9N7 239 aa5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 C2CD4CQ8TF44 421 aa5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 KCNJ9Q92806 393 aa5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 TRAPPC9Q96Q05 1148 aa5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 NTPCRQ9BSD7 190 aaKnown RBP5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 POLDIP3Q9BY77 421 aaKnown RBP5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 TRIM31Q9BZY9 425 aa5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 NCKIPSDQ9NZQ3 722 aa5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 KCND3Q9UK17 655 aa5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 SLC4A4Q9Y6R1 1079 aa5.73□□□□□ -1.49
TOPBP1-206ENST00000508524 CKAP5Q14008 2032 aa5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 INAFM1C9JVW0 142 aa5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 F5H423 210 aaPredicted RBP5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 H0Y3Z8 333 aa5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 I6L893 689 aaPredicted RBP5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 RGS14O43566 566 aa5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 CYP1A2P05177 515 aa5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 CPA1P15085 419 aa5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 CHN1P15882 459 aa5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 TNFRSF8P28908 595 aa5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 MLH1P40692 756 aa5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 GPS2Q13227 327 aa5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 GPR18Q14330 331 aa5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 DUSP6Q16828 381 aa5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 SLC4A8Q2Y0W8 1093 aa5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 C5orf22Q49AR2 442 aa5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 LRRC24Q50LG9 513 aa5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 TMEM71Q6P5X7 295 aa5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 MYLK4Q86YV6 388 aaPredicted RBP5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 ADHFE1Q8IWW8 467 aa5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 DPP10Q8N608 796 aa5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 IQCF1Q8N6M8 205 aa5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 PTGR2Q8N8N7 351 aaPredicted RBP5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 GRHPRQ9UBQ7 328 aa5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 TAGLN3Q9UI15 199 aa5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 BAG5Q9UL15 447 aa5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 MYO6Q9UM54 1294 aa5.72□□□□□ -1.49
TOPBP1-206ENST00000508524 A0A1B0GVT2 93 aa5.71□□□□□ -1.5
TOPBP1-206ENST00000508524 SPRY3O43610 288 aa5.71□□□□□ -1.5
TOPBP1-206ENST00000508524 HLA-DQA2P01906 255 aa5.71□□□□□ -1.5
TOPBP1-206ENST00000508524 UNGP13051 313 aaPredicted RBP5.71□□□□□ -1.5
TOPBP1-206ENST00000508524 EGR4Q05215 589 aa5.71□□□□□ -1.5
TOPBP1-206ENST00000508524 PDCLQ13371 301 aa5.71□□□□□ -1.5
TOPBP1-206ENST00000508524 BRD3Q15059 726 aa5.71□□□□□ -1.5
TOPBP1-206ENST00000508524 DCAF12L2Q5VW00 463 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms