RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 DTNAQ9Y4J8 743 aa13.12□□□□□ -0.31
SMG7-214ENST00000508461 PRRC2BQ5JSZ5 2229 aaKnown RBP13.11□□□□□ -0.31
SMG7-214ENST00000508461 ATP6AP2A0A1C7CYW4 349 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 DAB1O75553 588 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 ATP6AP2O75787 350 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 LRIG2O94898 1065 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 F9P00740 461 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 CPB1P15086 417 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 ETV4P43268 484 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 CCR10P46092 362 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 LHX1P48742 406 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 BLMHQ13867 455 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 GRM3Q14832 879 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 KRT72Q14CN4 511 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 GPR152Q8TDT2 470 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 APBB2Q92870 758 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 MYLPFQ96A32 169 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 EME1Q96AY2 570 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 RMDN1Q96DB5 314 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 LNPEPQ9UIQ6 1025 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 MEIS3P2A8K0S8 358 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 BNIP3LO60238 219 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 AMHP03971 560 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 ALDOAP04075 364 aaKnown RBP13.11□□□□□ -0.31
SMG7-214ENST00000508461 OR4Q2P0C623 313 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 ZNF157P51786 506 aaPredicted RBP13.11□□□□□ -0.31
SMG7-214ENST00000508461 EFEMP1Q12805 493 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 DENND6AQ8IWF6 608 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 PLD6Q8N2A8 252 aaKnown RBP13.11□□□□□ -0.31
SMG7-214ENST00000508461 SMARCD1Q96GM5 515 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 KATNAL1Q9BW62 490 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 GPAMQ9HCL2 828 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 CCDC167Q9P0B6 97 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 STX18Q9P2W9 335 aaKnown RBP13.11□□□□□ -0.31
SMG7-214ENST00000508461 ST3GAL5Q9UNP4 418 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 CRYL1Q9Y2S2 319 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 V9GYQ6 96 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 IQCA1LA6NCM1 817 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 TSPAN3O60637 253 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 FBXO21O94952 628 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 SNAI1O95863 264 aaPredicted RBP13.11□□□□□ -0.31
SMG7-214ENST00000508461 PIRTP0C851 137 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 THRAP10827 490 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 ODC1P11926 461 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 COX4I1P13073 169 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 PAPOLAP51003 745 aaKnown RBP13.11□□□□□ -0.31
SMG7-214ENST00000508461 MPP1Q00013 466 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 RBBP5Q15291 538 aaKnown RBP13.11□□□□□ -0.31
SMG7-214ENST00000508461 FAM187BQ17R55 369 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 ANO4Q32M45 955 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 ANO7Q6IWH7 933 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 IRGCQ6NXR0 463 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 BNC2Q6ZN30 1099 aaPredicted RBP13.11□□□□□ -0.31
SMG7-214ENST00000508461 CLEC20AQ6ZU45 233 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 RAB44Q7Z6P3 723 aaPredicted RBP13.11□□□□□ -0.31
SMG7-214ENST00000508461 TMEM40Q8WWA1 233 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 OXCT2Q9BYC2 517 aaPredicted RBP13.11□□□□□ -0.31
SMG7-214ENST00000508461 MRPL1Q9BYD6 325 aaKnown RBP13.11□□□□□ -0.31
SMG7-214ENST00000508461 KANSL3Q9P2N6 904 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 APPL1Q9UKG1 709 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 PPM1HQ9ULR3 514 aa13.11□□□□□ -0.31
SMG7-214ENST00000508461 FAM95CA0A1B0GW59 222 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 DPYSL4O14531 572 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 ANXA9O76027 345 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 DDHD2O94830 711 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 HOXA11P31270 313 aaPredicted RBP13.1□□□□□ -0.31
SMG7-214ENST00000508461 PDAP1Q13442 181 aaKnown RBP13.1□□□□□ -0.31
SMG7-214ENST00000508461 FSCN1Q16658 493 aaKnown RBP13.1□□□□□ -0.31
SMG7-214ENST00000508461 TMEM198Q66K66 360 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 OVOS1Q6IE37 1185 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 CYP2R1Q6VVX0 501 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 NET1Q7Z628 596 aaPredicted RBP13.1□□□□□ -0.31
SMG7-214ENST00000508461 LINC00523Q86TU6 105 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 LDB1Q86U70 411 aaPredicted RBP13.1□□□□□ -0.31
SMG7-214ENST00000508461 PHTF2Q8N3S3 785 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 BHMTQ93088 406 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 ATP6V1E2Q96A05 226 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 CATSPERBQ9H7T0 1116 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 AAR2Q9Y312 384 aaKnown RBP13.1□□□□□ -0.31
SMG7-214ENST00000508461 FKBP6O75344 327 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 SEC24DO94855 1032 aaPredicted RBP13.1□□□□□ -0.31
SMG7-214ENST00000508461 CCNHP51946 323 aaPredicted RBP13.1□□□□□ -0.31
SMG7-214ENST00000508461 TPD52P55327 224 aaPredicted RBP13.1□□□□□ -0.31
SMG7-214ENST00000508461 YWHAHQ04917 246 aaPredicted RBP13.1□□□□□ -0.31
SMG7-214ENST00000508461 ZNF235Q14590 738 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 FAM83EQ2M2I3 478 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 ARHGAP17Q68EM7 881 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 C16orf89Q6UX73 402 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 KYQ8NBH2 561 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 LENG8Q96PV6 779 aaPredicted RBP13.1□□□□□ -0.31
SMG7-214ENST00000508461 SEPT5Q99719 369 aaPredicted RBP13.1□□□□□ -0.31
SMG7-214ENST00000508461 COPS7BQ9H9Q2 264 aaPredicted RBP13.1□□□□□ -0.31
SMG7-214ENST00000508461 NCF1BA6NI72 391 aaPredicted RBP13.1□□□□□ -0.31
SMG7-214ENST00000508461 NCF1CA8MVU1 366 aaPredicted RBP13.1□□□□□ -0.31
SMG7-214ENST00000508461 NCF1P14598 390 aaPredicted RBP13.1□□□□□ -0.31
SMG7-214ENST00000508461 CCR1P32246 355 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 IDH3AP50213 366 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 CCL14Q16627 93 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 AGKQ53H12 422 aa13.1□□□□□ -0.31
SMG7-214ENST00000508461 ACMSDQ8TDX5 336 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms