RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 MAMLD1Q13495 774 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 EFHC2Q5JST6 749 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 ACBD5Q5T8D3 534 aaPredicted RBP9.62□□□□□ -0.87
DDX41-209ENST00000508279 FAM72AQ5TYM5 149 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 FAM72DQ6L9T8 149 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 PPP1R2P3Q6NXS1 205 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 TMC6Q7Z403 805 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 SETD3Q86TU7 594 aaPredicted RBP9.62□□□□□ -0.87
DDX41-209ENST00000508279 VPS36Q86VN1 386 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 FAM72BQ86X60 149 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 HDDC3Q8N4P3 179 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 SH2D3CQ8N5H7 860 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 KDM1BQ8NB78 822 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 CEP76Q8TAP6 659 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 OR8D1Q8WZ84 308 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 CENPIQ92674 756 aaPredicted RBP9.62□□□□□ -0.87
DDX41-209ENST00000508279 TBC1D31Q96DN5 1066 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 FAM129BQ96TA1 746 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 PSMB7Q99436 277 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 CNPY3Q9BT09 278 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 SYT11Q9BT88 431 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 C2orf49Q9BVC5 232 aaPredicted RBP9.62□□□□□ -0.87
DDX41-209ENST00000508279 EDEM3Q9BZQ6 932 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 NEUROG2Q9H2A3 272 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 TMEM9BQ9NQ34 198 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 PARVAQ9NVD7 372 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 GPATCH2LQ9NWQ4 482 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 CNOT8Q9UFF9 292 aaKnown RBP9.62□□□□□ -0.87
DDX41-209ENST00000508279 SERGEFQ9UGK8 458 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 PCSK1NQ9UHG2 260 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 EIF2B4Q9UI10 523 aaKnown RBP9.62□□□□□ -0.87
DDX41-209ENST00000508279 SLC6A14Q9UN76 642 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 LUC7L2Q9Y383 392 aaKnown RBP9.62□□□□□ -0.87
DDX41-209ENST00000508279 FARP1Q9Y4F1 1045 aaPredicted RBP9.62□□□□□ -0.87
DDX41-209ENST00000508279 OR51B4Q9Y5P0 310 aa9.62□□□□□ -0.87
DDX41-209ENST00000508279 ILVBLA1L0T0 632 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 METTL12A8MUP2 240 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 K7ERQ8 282 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 CBFA2T2O43439 604 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 ADH1BP00325 375 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 SERPINF2P08697 491 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 SRCP12931 536 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 CASP14P31944 242 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 ACVRL1P37023 503 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 PBX1P40424 430 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 PRKCIP41743 596 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 METAP1P53582 386 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 ZBED6P86452 979 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 GNA12Q03113 381 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 ZBTB16Q05516 673 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 SFSWAPQ12872 951 aaKnown RBP9.61□□□□□ -0.87
DDX41-209ENST00000508279 ELAVL3Q14576 367 aaKnown RBP9.61□□□□□ -0.87
DDX41-209ENST00000508279 FIGNQ5HY92 759 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 PPM1JQ5JR12 505 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 PPP1R15BQ5SWA1 713 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 DAB2IPQ5VWQ8 1189 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 SLC23A3Q6PIS1 610 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.61□□□□□ -0.87
DDX41-209ENST00000508279 LEKR1Q6ZMV7 388 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 ERMP1Q7Z2K6 904 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 RABEPKQ7Z6M1 372 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 DSG4Q86SJ6 1040 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 DCAF4L2Q8NA75 395 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 CADM4Q8NFZ8 388 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 OR2I1PQ8NGU4 316 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 OR14C36Q8NHC7 312 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 FRS2Q8WU20 508 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 VCPIP1Q96JH7 1222 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 OSBPL2Q9H1P3 480 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 TNKS2Q9H2K2 1166 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 SGK2Q9HBY8 427 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 NDFIP2Q9NV92 336 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 PPARGC1AQ9UBK2 798 aaKnown RBP9.61□□□□□ -0.87
DDX41-209ENST00000508279 SUSD2Q9UGT4 822 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 ADAMTS1Q9UHI8 967 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 EVLQ9UI08 416 aaPredicted RBP9.61□□□□□ -0.87
DDX41-209ENST00000508279 CAPN11Q9UMQ6 739 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 SCML1Q9UN30 329 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.61□□□□□ -0.879e-8■■□□□ 13.4
DDX41-209ENST00000508279 ACTL7AQ9Y615 435 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 CHD5Q8TDI0 1954 aa9.61□□□□□ -0.87
DDX41-209ENST00000508279 SPTBN2O15020 2390 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 A0A1B0GTW7 788 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 A0A1W2PQJ5 194 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 MED19A0JLT2 244 aaPredicted RBP9.6□□□□□ -0.87
DDX41-209ENST00000508279 C1QTNF3-AMACRE9PGA6 284 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 HAX1O00165 279 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 CDX4O14627 284 aaPredicted RBP9.6□□□□□ -0.87
DDX41-209ENST00000508279 BCAT2O15382 392 aaPredicted RBP9.6□□□□□ -0.87
DDX41-209ENST00000508279 SMAD6O43541 496 aaKnown RBP9.6□□□□□ -0.87
DDX41-209ENST00000508279 ATP9BO43861 1147 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 RNF8O76064 485 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 IGLV3-19P01714 112 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 GYPCP04921 128 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 SERPING1P05155 500 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 SYPP08247 313 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 GZMAP12544 262 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 RHOQP17081 205 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 C5AR1P21730 350 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 EPHB2P29323 1055 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms