RNA–Protein interactions for RNA: ENST00000506832.6

GPATCH4-211, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-211ENST00000506832 DNA2P51530 1060 aa13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 COPB1P53618 953 aaKnown RBP13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 OXCT1P55809 520 aa13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 CLDN6P56747 220 aa13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 CNTN1Q12860 1018 aa13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 SFSWAPQ12872 951 aaKnown RBP13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 ZNF423Q2M1K9 1284 aa13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 SLC25A52Q3SY17 297 aa13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 BRMS1LQ5PSV4 323 aa13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 LEKR1Q6ZMV7 388 aa13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 DSG4Q86SJ6 1040 aa13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 SLCO6A1Q86UG4 719 aa13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 SH2D3CQ8N5H7 860 aa13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 KDM1BQ8NB78 822 aa13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 CHST14Q8NCH0 376 aa13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 JOSD2Q8TAC2 188 aa13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 ENOX1Q8TC92 643 aaKnown RBP13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 ALG14Q96F25 216 aa13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 PSMB7Q99436 277 aa13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 ORAI3Q9BRQ5 295 aa13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 TMEM121BQ9BXQ6 578 aaPredicted RBP13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 FZD3Q9NPG1 666 aa13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 NOCTQ9UK39 431 aaKnown RBP13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 FZD4Q9ULV1 537 aa13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 APOBEC2Q9Y235 224 aaKnown RBP13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 NEUROG3Q9Y4Z2 214 aa13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 CACNA1EQ15878 2313 aa13.16□□□□□ -0.3
GPATCH4-211ENST00000506832 MAP1BP46821 2468 aaKnown RBP13.15□□□□□ -0.3
GPATCH4-211ENST00000506832 FAM149AA5PLN7 773 aa13.15□□□□□ -0.3
GPATCH4-211ENST00000506832 SMAD6O43541 496 aaKnown RBP13.15□□□□□ -0.3
GPATCH4-211ENST00000506832 SDC3O75056 442 aa13.15□□□□□ -0.3
GPATCH4-211ENST00000506832 CBFA2T3O75081 653 aa13.15□□□□□ -0.3
GPATCH4-211ENST00000506832 LSM8O95777 96 aaKnown RBP13.15□□□□□ -0.3
GPATCH4-211ENST00000506832 PRLRP16471 622 aa13.15□□□□□ -0.3
GPATCH4-211ENST00000506832 CTSKP43235 329 aa13.15□□□□□ -0.3
GPATCH4-211ENST00000506832 GABRB2P47870 512 aa13.15□□□□□ -0.3
GPATCH4-211ENST00000506832 RACK1P63244 317 aaKnown RBP13.15□□□□□ -0.3
GPATCH4-211ENST00000506832 KRT83P78385 493 aa13.15□□□□□ -0.3
GPATCH4-211ENST00000506832 FMO1Q01740 532 aa13.15□□□□□ -0.3
GPATCH4-211ENST00000506832 STX1AQ16623 288 aa13.15□□□□□ -0.3
GPATCH4-211ENST00000506832 CDKAL1Q5VV42 579 aa13.15□□□□□ -0.3
GPATCH4-211ENST00000506832 RWDD4Q6NW29 188 aaKnown RBP13.15□□□□□ -0.3
GPATCH4-211ENST00000506832 C22orf39Q6P5X5 142 aa13.15□□□□□ -0.3
GPATCH4-211ENST00000506832 ZNF354CQ86Y25 554 aa13.15□□□□□ -0.3
GPATCH4-211ENST00000506832 AOPEPQ8N6M6 819 aa13.15□□□□□ -0.3
GPATCH4-211ENST00000506832 NEK11Q8NG66 645 aa13.15□□□□□ -0.3
GPATCH4-211ENST00000506832 RXFP2Q8WXD0 754 aa13.15□□□□□ -0.3
GPATCH4-211ENST00000506832 C2orf49Q9BVC5 232 aaPredicted RBP13.15□□□□□ -0.3
GPATCH4-211ENST00000506832 MAGEB5Q9BZ81 275 aa13.15□□□□□ -0.3
GPATCH4-211ENST00000506832 RRN3Q9NYV6 651 aa13.15□□□□□ -0.3
GPATCH4-211ENST00000506832 OR51B4Q9Y5P0 310 aa13.15□□□□□ -0.3
GPATCH4-211ENST00000506832 LAMA1P25391 3075 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 TPRP12270 2363 aaKnown RBP13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 GOLGA6L22H0YM25 854 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 RNF103O00237 685 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 ATP9BO43861 1147 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 TRIM16O95361 564 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 F9P00740 461 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 ITGAVP06756 1048 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 CTSLP07711 333 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 CHRNB2P17787 502 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 CDK11BP21127 795 aaKnown RBP13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 CD38P28907 300 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 STAT1P42224 750 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 GRK6P43250 576 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 PLK1P53350 603 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 CDR2Q01850 454 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 UBXN1Q04323 297 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 HNRNPDQ14103 355 aaKnown RBP13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 ARID5BQ14865 1188 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 SUZ12Q15022 739 aaKnown RBP13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 AGBL4Q5VU57 503 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 FAM46CQ5VWP2 391 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 RAB44Q7Z6P3 723 aaPredicted RBP13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 ZNF683Q8IZ20 524 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 RYBPQ8N488 228 aaPredicted RBP13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 ANKRD20A12PQ8NF67 263 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 OR6K2Q8NGY2 324 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 ARRDC3Q96B67 414 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 PPP1R9BQ96SB3 815 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 TM6SF2Q9BZW4 377 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 CAAP1Q9H8G2 361 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 ATP13A1Q9HD20 1204 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 DYRK4Q9NR20 520 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 FTSJ1Q9UET6 329 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 ADAMTS1Q9UHI8 967 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 DNAI1Q9UI46 699 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 FCF1Q9Y324 198 aaKnown RBP13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 MSRB2Q9Y3D2 182 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 PAXBP1Q9Y5B6 917 aa13.14□□□□□ -0.31
GPATCH4-211ENST00000506832 VILLO15195 856 aa13.13□□□□□ -0.31
GPATCH4-211ENST00000506832 SLC31A1O15431 190 aa13.13□□□□□ -0.31
GPATCH4-211ENST00000506832 RNGTTO60942 597 aaKnown RBP13.13□□□□□ -0.31
GPATCH4-211ENST00000506832 ZNF883P0CG24 379 aa13.13□□□□□ -0.31
GPATCH4-211ENST00000506832 SDC4P31431 198 aa13.13□□□□□ -0.31
GPATCH4-211ENST00000506832 CHRNA3P32297 505 aa13.13□□□□□ -0.31
GPATCH4-211ENST00000506832 ACVRL1P37023 503 aa13.13□□□□□ -0.31
GPATCH4-211ENST00000506832 RECQLP46063 649 aaPredicted RBP13.13□□□□□ -0.31
GPATCH4-211ENST00000506832 NSFP46459 744 aaKnown RBP13.13□□□□□ -0.31
GPATCH4-211ENST00000506832 MYL5Q02045 173 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms