RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 SLC10A7Q0GE19 358 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 OVGP1Q12889 678 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 IKBKEQ14164 716 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 TRIP4Q15650 581 aaPredicted RBP12.44□□□□□ -0.42
LIN54-206ENST00000506560 USP41Q3LFD5 358 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 TTC31Q49AM3 519 aaPredicted RBP12.44□□□□□ -0.42
LIN54-206ENST00000506560 SLC8B1Q6J4K2 584 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 KIAA1841Q6NSI8 718 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 PACS1Q6VY07 963 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 RNF168Q8IYW5 571 aaPredicted RBP12.44□□□□□ -0.42
LIN54-206ENST00000506560 CCDC63Q8NA47 563 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 ANKLE1Q8NAG6 615 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 CCT6BQ92526 530 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 ZNF75CPQ92670 426 aaPredicted RBP12.44□□□□□ -0.42
LIN54-206ENST00000506560 PSMG2Q969U7 264 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 IL12RB2Q99665 862 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 PITPNM3Q9BZ71 974 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 CRISPLD2Q9H0B8 497 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 ZNF395Q9H8N7 513 aaPredicted RBP12.44□□□□□ -0.42
LIN54-206ENST00000506560 GKN1Q9NS71 199 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 ZNF212Q9UDV6 495 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 TRIM43BA6NCK2 446 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 FGF10O15520 208 aaPredicted RBP12.43□□□□□ -0.42
LIN54-206ENST00000506560 ALDOAP04075 364 aaKnown RBP12.43□□□□□ -0.42
LIN54-206ENST00000506560 ZDHHC11BP0C7U3 371 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 SPATA31D3P0C874 917 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 GBP2P32456 591 aaPredicted RBP12.43□□□□□ -0.42
LIN54-206ENST00000506560 ACVRL1P37023 503 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 ELAVL2Q12926 359 aaKnown RBP12.43□□□□□ -0.42
LIN54-206ENST00000506560 PCSK7Q16549 785 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 PPM1JQ5JR12 505 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 SPATA31D4Q6ZUB0 917 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 RASSF3Q86WH2 238 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 OTUD6BQ8N6M0 293 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 TRIM43Q96BQ3 446 aaPredicted RBP12.43□□□□□ -0.42
LIN54-206ENST00000506560 SPATA17Q96L03 361 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 TSGA13Q96PP4 275 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 FICDQ9BVA6 458 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 CLIC5Q9NZA1 410 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 ZNF180Q9UJW8 692 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 TRHDEQ9UKU6 1024 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 PHTF1Q9UMS5 762 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 H7C4K7 107 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 MATN3O15232 486 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 KRT37O76014 449 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 RTN3O95197 1032 aaPredicted RBP12.43□□□□□ -0.42
LIN54-206ENST00000506560 ZWINTO95229 277 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 SGSHP51688 502 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 ZNF135P52742 658 aaPredicted RBP12.43□□□□□ -0.42
LIN54-206ENST00000506560 SLC18A1P54219 525 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 POU6F1Q14863 301 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 HSP90AA5PQ58FG0 334 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 DENND5AQ6IQ26 1287 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 C16orf46Q6P387 395 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 SPATA21Q7Z572 469 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 CMC1Q7Z7K0 106 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 ZNF354CQ86Y25 554 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 PPM1EQ8WY54 764 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 PABPC5Q96DU9 382 aaKnown RBP12.43□□□□□ -0.42
LIN54-206ENST00000506560 CERS2Q96G23 380 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 ZNF512Q96ME7 567 aaPredicted RBP12.43□□□□□ -0.42
LIN54-206ENST00000506560 RPRD1AQ96P16 312 aaPredicted RBP12.43□□□□□ -0.42
LIN54-206ENST00000506560 GLOD4Q9HC38 313 aa12.43□□□□□ -0.42
LIN54-206ENST00000506560 USP15Q9Y4E8 981 aaPredicted RBP12.43□□□□□ -0.42
LIN54-206ENST00000506560 CCDC195A0A1B0GUA6 201 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 IGLV3-27P01718 113 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 HMGA1P17096 107 aaKnown RBP12.42□□□□□ -0.42
LIN54-206ENST00000506560 BGNP21810 368 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 ETFBP38117 255 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 ANKRD20A4Q4UJ75 823 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 ITPRIPL1Q6GPH6 555 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 OTOAQ7RTW8 1153 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 CHSY1Q86X52 802 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 NDUFAF2Q8N183 169 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 ARMC2Q8NEN0 867 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 TOP1MTQ969P6 601 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 BTN2A3PQ96KV6 586 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 C1orf74Q96LT6 269 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 TOX2Q96NM4 488 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 ZYG11BQ9C0D3 744 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 RNF38Q9H0F5 515 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 CYP4F11Q9HBI6 524 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 SSU72Q9NP77 194 aaKnown RBP12.42□□□□□ -0.42
LIN54-206ENST00000506560 ZNF358Q9NW07 568 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 BFARQ9NZS9 450 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 SLC2A6Q9UGQ3 507 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 A0A0D9SEW6 157 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 C2orf78A6NCI8 922 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 COPEO14579 308 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 TPP1O14773 563 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 MTSS1O43312 755 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 CACNG3O60359 315 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 KIAA0754O94854 1291 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 DHRS4L1P0CG22 281 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 DLG2Q15700 870 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 FAM133BQ5BKY9 247 aaKnown RBP12.42□□□□□ -0.42
LIN54-206ENST00000506560 CNKSR3Q6P9H4 555 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 MARK2Q7KZI7 788 aaKnown RBP12.42□□□□□ -0.42
LIN54-206ENST00000506560 TMEM135Q86UB9 458 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 ARHGAP18Q8N392 663 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms