RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 COL20A1Q9P218 1284 aa16.18■□□□□ 0.18
SCLT1-208ENST00000506368 ERGIC3Q9Y282 383 aa16.18■□□□□ 0.18
SCLT1-208ENST00000506368 TRIM17Q9Y577 477 aa16.18■□□□□ 0.18
SCLT1-208ENST00000506368 C9IYK1 514 aa16.18■□□□□ 0.18
SCLT1-208ENST00000506368 K7ERI5 159 aa16.18■□□□□ 0.18
SCLT1-208ENST00000506368 STBD1O95210 358 aa16.18■□□□□ 0.18
SCLT1-208ENST00000506368 PSAPP07602 524 aa16.18■□□□□ 0.18
SCLT1-208ENST00000506368 P4HA1P13674 534 aa16.18■□□□□ 0.18
SCLT1-208ENST00000506368 PTPN1P18031 435 aaKnown RBP16.18■□□□□ 0.18
SCLT1-208ENST00000506368 PKNOX1P55347 436 aa16.18■□□□□ 0.18
SCLT1-208ENST00000506368 MMRN1Q13201 1228 aa16.18■□□□□ 0.18
SCLT1-208ENST00000506368 SPANXN3Q5MJ09 141 aa16.18■□□□□ 0.18
SCLT1-208ENST00000506368 ZBTB49Q6ZSB9 765 aa16.18■□□□□ 0.18
SCLT1-208ENST00000506368 FASTKD5Q7L8L6 764 aaKnown RBP16.18■□□□□ 0.18
SCLT1-208ENST00000506368 EEPD1Q7L9B9 569 aa16.18■□□□□ 0.18
SCLT1-208ENST00000506368 MAPK15Q8TD08 544 aa16.18■□□□□ 0.18
SCLT1-208ENST00000506368 ATP6V1E2Q96A05 226 aa16.18■□□□□ 0.18
SCLT1-208ENST00000506368 CCDC138Q96M89 665 aa16.18■□□□□ 0.18
SCLT1-208ENST00000506368 AGAP3Q96P47 875 aa16.18■□□□□ 0.18
SCLT1-208ENST00000506368 TCF12Q99081 682 aa16.18■□□□□ 0.18
SCLT1-208ENST00000506368 UPF3AQ9H1J1 476 aaKnown RBP16.18■□□□□ 0.18
SCLT1-208ENST00000506368 MAGEE1Q9HCI5 957 aa16.18■□□□□ 0.18
SCLT1-208ENST00000506368 ARMC1Q9NVT9 282 aa16.18■□□□□ 0.18
SCLT1-208ENST00000506368 H3BMQ9 156 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 PIK3R2O00459 728 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 MDM4O15151 490 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 ADAM23O75077 832 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 HSPA8P11142 646 aaKnown RBP16.17■□□□□ 0.18
SCLT1-208ENST00000506368 COL6A2P12110 1019 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 PRKG1Q13976 671 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 PGM5Q15124 567 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 TAF5Q15542 800 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 DUOXA2Q1HG44 320 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 CCDC14Q49A88 953 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 ZPBP2Q6X784 338 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 GADL1Q6ZQY3 521 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 LINC00299Q6ZSB3 139 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 APOBEC3FQ8IUX4 373 aaKnown RBP16.17■□□□□ 0.18
SCLT1-208ENST00000506368 MPP5Q8N3R9 675 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 EMC1Q8N766 993 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 FAM47BQ8NA70 645 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 GPRASP2Q96D09 838 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 COG8Q96MW5 612 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 PPP1R10Q96QC0 940 aaKnown RBP16.17■□□□□ 0.18
SCLT1-208ENST00000506368 PEBP4Q96S96 227 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 NPLQ9BXD5 320 aaPredicted RBP16.17■□□□□ 0.18
SCLT1-208ENST00000506368 DNAI2Q9GZS0 605 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 ADAMTS10Q9H324 1103 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 SNX15Q9NRS6 342 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 OXSMQ9NWU1 459 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 HEATR9A2RTY3 570 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 CFAP99D6REC4 459 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 G3V2L1 256 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 K7EPI3 171 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 DPYSL4O14531 572 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 UGT1A6P19224 532 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 UGT1A1P22309 533 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 UGT1A4P22310 534 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 UGT1A3P35503 534 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 UGT1A5P35504 534 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 TMBIM6P55061 237 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 SLC10A2Q12908 348 aaPredicted RBP16.17■□□□□ 0.18
SCLT1-208ENST00000506368 CYP4V2Q6ZWL3 525 aaPredicted RBP16.17■□□□□ 0.18
SCLT1-208ENST00000506368 CLEC14AQ86T13 490 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 SIX6OS1Q8N1H7 587 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 MYO1HQ8N1T3 1032 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 PQLC3Q8N755 202 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 CLEC4DQ8WXI8 215 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 CPXM1Q96SM3 734 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 ZNF408Q9H9D4 720 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 DUS2Q9NX74 493 aaKnown RBP16.17■□□□□ 0.18
SCLT1-208ENST00000506368 GABBR1Q9UBS5 961 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 ANKRD6Q9Y2G4 727 aa16.17■□□□□ 0.18
SCLT1-208ENST00000506368 WDR81Q562E7 1941 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 A0A1B0GTW7 788 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 TRPC5OSA6NMA1 111 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 HACD1B0YJ81 288 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 AKAP10O43572 662 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 METTL18O95568 372 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 ITGBL1O95965 494 aaPredicted RBP16.16■□□□□ 0.18
SCLT1-208ENST00000506368 FUCA1P04066 466 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 ERBB2P04626 1255 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 POLBP06746 335 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 ALOX5P09917 674 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 PSME3P61289 254 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 JAG1P78504 1218 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 NDUFA5Q16718 116 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 MAP7D1Q3KQU3 841 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 ANKDD1AQ495B1 522 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 PPM1LQ5SGD2 360 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 DEPDC1Q5TB30 811 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 LIPMQ5VYY2 423 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 NANOGP8Q6NSW7 305 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 HACD2Q6Y1H2 254 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 HERC6Q8IVU3 1022 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 SYTL5Q8TDW5 730 aaPredicted RBP16.16■□□□□ 0.18
SCLT1-208ENST00000506368 FAM151AQ8WW52 585 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 LRTOMTQ8WZ04 291 aa16.16■□□□□ 0.18
SCLT1-208ENST00000506368 USP13Q92995 863 aaPredicted RBP16.16■□□□□ 0.18
SCLT1-208ENST00000506368 RBBP8Q99708 897 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms