RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 ENPEPQ07075 957 aa11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 ADAM9Q13443 819 aa11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 SLC12A1Q13621 1099 aa11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 DLG2Q15700 870 aa11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 ZNF284Q2VY69 593 aa11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 RAP1GAP2Q684P5 730 aa11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 ZCCHC8Q6NZY4 707 aaKnown RBP11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 NEK5Q6P3R8 708 aa11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 GUSBP11Q6P575 273 aa11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 CLEC14AQ86T13 490 aa11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 SLC22A18ASQ8N1D0 253 aa11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 TPCN2Q8NHX9 752 aa11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 SLC35F5Q8WV83 523 aa11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 EEF2KMTQ96G04 330 aa11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 PAGE5Q96GU1 130 aa11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 SLC39A13Q96H72 371 aa11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 MIS12Q9H081 205 aa11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 ANKMY1Q9P2S6 941 aa11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 NAALADL1Q9UQQ1 740 aa11.9□□□□□ -0.5
CCHCR1-219ENST00000505392 O00370 1275 aa11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 ATP9BO43861 1147 aa11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 PCDH8O95206 1070 aa11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 YEATS4O95619 227 aa11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 AFPP02771 609 aaKnown RBP11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 FYNP06241 537 aa11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 FAM87AP0C7U9 286 aa11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 TACR2P21452 398 aa11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 RPL13P26373 211 aaKnown RBP11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 MXI1P50539 228 aa11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 PLK1P53350 603 aa11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 INHBCP55103 352 aa11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 PIP5KL1Q5T9C9 394 aa11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 OR6B2Q6IFH4 312 aa11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 ABI3BPQ7Z7G0 1075 aa11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 HORMAD1Q86X24 394 aa11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 CHSY1Q86X52 802 aa11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 DCP2Q8IU60 420 aaKnown RBP11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 CCAR2Q8N163 923 aaKnown RBP11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 DQX1Q8TE96 717 aaKnown RBP11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 SGF29Q96ES7 293 aa11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 BMFQ96LC9 184 aa11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 SERPINB11Q96P15 392 aa11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 KIAA1257Q9ULG3 409 aa11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 ATXN7L1Q9ULK2 861 aaPredicted RBP11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 PCDHA7Q9UN72 937 aa11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 MAPK8IP1Q9UQF2 711 aa11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 HS3ST3A1Q9Y663 406 aa11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 BOD1L1Q8NFC6 3051 aa11.89□□□□□ -0.51
CCHCR1-219ENST00000505392 MUSKO15146 869 aa11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 CASC3O15234 703 aaKnown RBP11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 TCEA3O75764 348 aa11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 CSF2P04141 144 aa11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 ITGB2P05107 769 aa11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 ITGA2BP08514 1039 aa11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 SFTPCP11686 197 aa11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 MLLT3P42568 568 aaPredicted RBP11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 CCDC15Q0P6D6 951 aa11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 SRSF6Q13247 344 aaKnown RBP11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 CUL2Q13617 745 aa11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 UBAP2LQ14157 1087 aaKnown RBP11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 FZD2Q14332 565 aa11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 DRAP1Q14919 205 aaPredicted RBP11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 TGIF1Q15583 401 aa11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 NFIL3Q16649 462 aa11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 DEFB133Q30KQ1 61 aa11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 ZC3H12AQ5D1E8 599 aaKnown RBP11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 LCLAT1Q6UWP7 414 aa11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 GCNT7Q6ZNI0 430 aa11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 Q6ZVU0 165 aa11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 ZNF548Q8NEK5 533 aaPredicted RBP11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 TFAP2BQ92481 460 aa11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 ERCC4Q92889 916 aaPredicted RBP11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 IL12RB2Q99665 862 aa11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 FOXD4L1Q9NU39 408 aa11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 NCKIPSDQ9NZQ3 722 aa11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 SEPT3Q9UH03 358 aa11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 SALL4Q9UJQ4 1053 aa11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 SLC25A13Q9UJS0 675 aa11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 ZFR2Q9UPR6 939 aaKnown RBP11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 CSNK1G3Q9Y6M4 447 aa11.88□□□□□ -0.51
CCHCR1-219ENST00000505392 TDRD6O60522 2096 aaKnown RBP11.87□□□□□ -0.51
CCHCR1-219ENST00000505392 DOCK9Q9BZ29 2069 aa11.87□□□□□ -0.51
CCHCR1-219ENST00000505392 CCDC187A0A096LP49 1063 aa11.87□□□□□ -0.51
CCHCR1-219ENST00000505392 POM121BA6NF01 834 aa11.87□□□□□ -0.51
CCHCR1-219ENST00000505392 A6NNZ2 444 aa11.87□□□□□ -0.51
CCHCR1-219ENST00000505392 F5H5T6 163 aa11.87□□□□□ -0.51
CCHCR1-219ENST00000505392 H3BM21 787 aa11.87□□□□□ -0.51
CCHCR1-219ENST00000505392 KPNA3O00505 521 aaPredicted RBP11.87□□□□□ -0.51
CCHCR1-219ENST00000505392 ALOX15BO15296 676 aa11.87□□□□□ -0.51
CCHCR1-219ENST00000505392 AQP9O43315 295 aa11.87□□□□□ -0.51
CCHCR1-219ENST00000505392 NOBOXO60393 691 aa11.87□□□□□ -0.51
CCHCR1-219ENST00000505392 PAK4O96013 591 aaPredicted RBP11.87□□□□□ -0.51
CCHCR1-219ENST00000505392 APOEP02649 317 aa11.87□□□□□ -0.51
CCHCR1-219ENST00000505392 CTSLP07711 333 aa11.87□□□□□ -0.51
CCHCR1-219ENST00000505392 SLC5A2P31639 672 aa11.87□□□□□ -0.51
CCHCR1-219ENST00000505392 ME1P48163 572 aa11.87□□□□□ -0.51
CCHCR1-219ENST00000505392 VASPP50552 380 aaPredicted RBP11.87□□□□□ -0.51
CCHCR1-219ENST00000505392 MCCD1P59942 119 aaPredicted RBP11.87□□□□□ -0.51
CCHCR1-219ENST00000505392 YWHAEP62258 255 aaKnown RBP11.87□□□□□ -0.51
CCHCR1-219ENST00000505392 NNTQ13423 1086 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms