RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 IPO11Q9UI26 975 aaKnown RBP21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 USP15Q9Y4E8 981 aaPredicted RBP21.78■■□□□ 1.08
UBE2D3-216ENST00000503742 AP3B1O00203 1094 aa21.77■■□□□ 1.08
UBE2D3-216ENST00000503742 USP1O94782 785 aa21.77■■□□□ 1.08
UBE2D3-216ENST00000503742 PEX11BO96011 259 aa21.77■■□□□ 1.08
UBE2D3-216ENST00000503742 SOD2P04179 222 aa21.77■■□□□ 1.08
UBE2D3-216ENST00000503742 KPNA1P52294 538 aaPredicted RBP21.77■■□□□ 1.08
UBE2D3-216ENST00000503742 MGAT5Q09328 741 aa21.77■■□□□ 1.08
UBE2D3-216ENST00000503742 SNX30Q5VWJ9 437 aa21.77■■□□□ 1.08
UBE2D3-216ENST00000503742 RAP1GAP2Q684P5 730 aa21.77■■□□□ 1.08
UBE2D3-216ENST00000503742 SPOCK2Q92563 424 aa21.77■■□□□ 1.08
UBE2D3-216ENST00000503742 GRAMD1AQ96CP6 724 aa21.77■■□□□ 1.08
UBE2D3-216ENST00000503742 CERS2Q96G23 380 aa21.77■■□□□ 1.08
UBE2D3-216ENST00000503742 VPS11Q9H270 941 aa21.77■■□□□ 1.08
UBE2D3-216ENST00000503742 HSFX1Q9UBD0 423 aa21.77■■□□□ 1.08
UBE2D3-216ENST00000503742 MAGED2Q9UNF1 606 aaPredicted RBP21.77■■□□□ 1.08
UBE2D3-216ENST00000503742 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 ABHD14A-ACY1A0A1B0GW23 586 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 MAGEB16A2A368 324 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 ABLIM3O94929 683 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 SEC24AO95486 1093 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 HLA-DQB2P05538 268 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 HMBSP08397 361 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 DNAJB2P25686 324 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 CDH17Q12864 832 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 DNAJC3Q13217 504 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 SEPT7Q16181 437 aaKnown RBP21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 CERCAMQ5T4B2 595 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 KIAA1841Q6NSI8 718 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 CES3Q6UWW8 571 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 TFAP2DQ7Z6R9 452 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 LINC00523Q86TU6 105 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 OTUD6BQ8N6M0 293 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 SPATA22Q8NHS9 363 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 LRRC8CQ8TDW0 803 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 OVCA2Q8WZ82 227 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 CDK5RAP1Q96SZ6 601 aaKnown RBP21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 APOL2Q9BQE5 337 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 IL22Q9GZX6 179 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 RBM22Q9NW64 420 aaKnown RBP eCLIP21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 WBP1LQ9NX94 342 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 SLC17A6Q9P2U8 582 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 HBS1LQ9Y450 684 aaKnown RBP21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 ZCWPW2A0A1B0GU75 182 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 FAM237BA0A1B0GVD1 139 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 ANXA9O76027 345 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 DSG1Q02413 1049 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 MTA1Q13330 715 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 PACS1Q6VY07 963 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 SPATA21Q7Z572 469 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 SLC39A11Q8N1S5 342 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 ZNF461Q8TAF7 563 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 CCT6BQ92526 530 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 ZNF75CPQ92670 426 aaPredicted RBP21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 PPP1R2P1Q96PQ5 205 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 PITPNM3Q9BZ71 974 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 PRKAG3Q9UGI9 489 aa21.76■■□□□ 1.07
UBE2D3-216ENST00000503742 C2CD2LO14523 706 aa21.75■■□□□ 1.07
UBE2D3-216ENST00000503742 COPEO14579 308 aa21.75■■□□□ 1.07
UBE2D3-216ENST00000503742 MT-CYBP00156 380 aaPredicted RBP21.75■■□□□ 1.07
UBE2D3-216ENST00000503742 SF3A3Q12874 501 aaKnown RBP eCLIP21.75■■□□□ 1.072e-8■□□□□ 10.5
UBE2D3-216ENST00000503742 ANO4Q32M45 955 aa21.75■■□□□ 1.07
UBE2D3-216ENST00000503742 ANKRD20A4Q4UJ75 823 aa21.75■■□□□ 1.07
UBE2D3-216ENST00000503742 MROH9Q5TGP6 573 aa21.75■■□□□ 1.07
UBE2D3-216ENST00000503742 NADSYN1Q6IA69 706 aa21.75■■□□□ 1.07
UBE2D3-216ENST00000503742 HMCESQ96FZ2 354 aa21.75■■□□□ 1.07
UBE2D3-216ENST00000503742 SRPK1Q96SB4 655 aaKnown RBP21.75■■□□□ 1.07
UBE2D3-216ENST00000503742 SOX13Q9UN79 622 aa21.75■■□□□ 1.07
UBE2D3-216ENST00000503742 HMGA1P17096 107 aaKnown RBP21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 HNRNPDQ14103 355 aaKnown RBP21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 CDHR3Q6ZTQ4 885 aa21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 CCDC121Q6ZUS5 278 aa21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 FAM47EQ6ZV65 393 aa21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 CHSY1Q86X52 802 aa21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 PDZD8Q8NEN9 1154 aa21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 ZNF669Q96BR6 464 aaPredicted RBP21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 ZNF558Q96NG5 402 aa21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 DNMT3LQ9UJW3 386 aa21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 STARD13Q9Y3M8 1113 aa21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 PSAT1Q9Y617 370 aa21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 CCT8L1PA6NM43 557 aa21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 ATP9BO43861 1147 aa21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 EDF1O60869 148 aaKnown RBP21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 ERVK-10P10266 1014 aa21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 ADRA1AP35348 466 aa21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 DEFB103AP81534 67 aa21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 RNF187Q5TA31 235 aaPredicted RBP21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 TPGS2Q68CL5 300 aa21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 RASSF3Q86WH2 238 aa21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 CNPY4Q8N129 248 aa21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 FAM111AQ96PZ2 611 aa21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 TBL1YQ9BQ87 522 aa21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 HERC2P3Q9BVR0 1158 aa21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 SLCO1B3Q9NPD5 702 aa21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 PHTF1Q9UMS5 762 aa21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 PLLPQ9Y342 182 aa21.74■■□□□ 1.07
UBE2D3-216ENST00000503742 ZNF840PA6NDX5 716 aa21.73■■□□□ 1.07
UBE2D3-216ENST00000503742 TPH1P17752 444 aa21.73■■□□□ 1.07
UBE2D3-216ENST00000503742 ITGB8P26012 769 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms