RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 OXCT1P55809 520 aa16.68■□□□□ 0.26
SCLT1-204ENST00000503215 ATP11AP98196 1134 aa16.68■□□□□ 0.26
SCLT1-204ENST00000503215 CDR2Q01850 454 aa16.68■□□□□ 0.26
SCLT1-204ENST00000503215 SYCP1Q15431 976 aa16.68■□□□□ 0.26
SCLT1-204ENST00000503215 LINGO4Q6UY18 593 aa16.68■□□□□ 0.26
SCLT1-204ENST00000503215 SND1Q7KZF4 910 aaKnown RBP eCLIP16.68■□□□□ 0.26
SCLT1-204ENST00000503215 FAM131BQ86XD5 332 aa16.68■□□□□ 0.26
SCLT1-204ENST00000503215 SH2D3CQ8N5H7 860 aa16.68■□□□□ 0.26
SCLT1-204ENST00000503215 OR7D4Q8NG98 312 aa16.68■□□□□ 0.26
SCLT1-204ENST00000503215 SPAG5Q96R06 1193 aa16.68■□□□□ 0.26
SCLT1-204ENST00000503215 HSD3B7Q9H2F3 369 aa16.68■□□□□ 0.26
SCLT1-204ENST00000503215 METTL5Q9NRN9 209 aaKnown RBP16.68■□□□□ 0.26
SCLT1-204ENST00000503215 ZNF212Q9UDV6 495 aa16.68■□□□□ 0.26
SCLT1-204ENST00000503215 VPS51Q9UID3 782 aa16.68■□□□□ 0.26
SCLT1-204ENST00000503215 SLC25A13Q9UJS0 675 aa16.68■□□□□ 0.26
SCLT1-204ENST00000503215 PPM1HQ9ULR3 514 aa16.68■□□□□ 0.26
SCLT1-204ENST00000503215 NEUROG3Q9Y4Z2 214 aa16.68■□□□□ 0.26
SCLT1-204ENST00000503215 PLXNA2O75051 1894 aa16.68■□□□□ 0.26
SCLT1-204ENST00000503215 IGLV3-10A0A075B6K4 115 aa16.67■□□□□ 0.26
SCLT1-204ENST00000503215 A0A1W2PR77 199 aa16.67■□□□□ 0.26
SCLT1-204ENST00000503215 E9PAM4 449 aa16.67■□□□□ 0.26
SCLT1-204ENST00000503215 SRGAP2O75044 1071 aa16.67■□□□□ 0.26
SCLT1-204ENST00000503215 F9P00740 461 aa16.67■□□□□ 0.26
SCLT1-204ENST00000503215 CTSLP07711 333 aa16.67■□□□□ 0.26
SCLT1-204ENST00000503215 RHOCP08134 193 aa16.67■□□□□ 0.26
SCLT1-204ENST00000503215 ATXN1LP0C7T5 689 aaKnown RBP16.67■□□□□ 0.26
SCLT1-204ENST00000503215 SRCP12931 536 aa16.67■□□□□ 0.26
SCLT1-204ENST00000503215 RRM1P23921 792 aa16.67■□□□□ 0.26
SCLT1-204ENST00000503215 CCR5P51681 352 aa16.67■□□□□ 0.26
SCLT1-204ENST00000503215 RACK1P63244 317 aaKnown RBP16.67■□□□□ 0.26
SCLT1-204ENST00000503215 CNTN1Q12860 1018 aa16.67■□□□□ 0.26
SCLT1-204ENST00000503215 HNRNPDQ14103 355 aaKnown RBP16.67■□□□□ 0.26
SCLT1-204ENST00000503215 ZNF423Q2M1K9 1284 aa16.67■□□□□ 0.26
SCLT1-204ENST00000503215 C15orf59Q2T9L4 293 aaPredicted RBP16.67■□□□□ 0.26
SCLT1-204ENST00000503215 ADAT2Q7Z6V5 191 aaKnown RBP16.67■□□□□ 0.26
SCLT1-204ENST00000503215 JOSD2Q8TAC2 188 aa16.67■□□□□ 0.26
SCLT1-204ENST00000503215 BAHD1Q8TBE0 780 aaPredicted RBP16.67■□□□□ 0.26
SCLT1-204ENST00000503215 RHBDD1Q8TEB9 315 aa16.67■□□□□ 0.26
SCLT1-204ENST00000503215 OR8D1Q8WZ84 308 aa16.67■□□□□ 0.26
SCLT1-204ENST00000503215 C1orf74Q96LT6 269 aa16.67■□□□□ 0.26
SCLT1-204ENST00000503215 C11orf70Q9BRQ4 267 aa16.67■□□□□ 0.26
SCLT1-204ENST00000503215 TOR4AQ9NXH8 423 aa16.67■□□□□ 0.26
SCLT1-204ENST00000503215 ZMIZ1Q9ULJ6 1067 aa16.67■□□□□ 0.26
SCLT1-204ENST00000503215 MSRB2Q9Y3D2 182 aa16.67■□□□□ 0.26
SCLT1-204ENST00000503215 DOCK9Q9BZ29 2069 aa16.67■□□□□ 0.26
SCLT1-204ENST00000503215 TBC1D3DA0A087WVF3 549 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 TBC1D3IA0A087WXS9 549 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 TBC1D3EA0A087X179 549 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 TBC1D3KA0A087X1G2 549 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 TBC1D3FA6NER0 549 aaPredicted RBP16.66■□□□□ 0.26
SCLT1-204ENST00000503215 TBC1D3LB9A6J9 549 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 MCF2LO15068 1137 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 VILLO15195 856 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 TBC1D3HP0C7X1 549 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 MMP8P22894 467 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 MAT2AP31153 395 aaKnown RBP16.66■□□□□ 0.26
SCLT1-204ENST00000503215 RDXP35241 583 aaKnown RBP16.66■□□□□ 0.26
SCLT1-204ENST00000503215 PTP4A2Q12974 167 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 MTA1Q13330 715 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 NCAPHQ15003 741 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 SHBQ15464 509 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 CCDC14Q49A88 953 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 TBC1D3GQ6DHY5 549 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 TBC1D3CQ6IPX1 549 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 APTXQ7Z2E3 356 aaKnown RBP16.66■□□□□ 0.26
SCLT1-204ENST00000503215 GLRX5Q86SX6 157 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 MARCH9Q86YJ5 346 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 TBC1D3Q8IZP1 549 aaPredicted RBP16.66■□□□□ 0.26
SCLT1-204ENST00000503215 KDF1Q8NAX2 398 aaPredicted RBP16.66■□□□□ 0.26
SCLT1-204ENST00000503215 CHST14Q8NCH0 376 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 PIP4K2CQ8TBX8 421 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 RXFP2Q8WXD0 754 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 ADAMTS14Q8WXS8 1223 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 FAM131CQ96AQ9 280 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 AASDHPPTQ9NRN7 309 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 ARHGAP20Q9P2F6 1191 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 LIMA1Q9UHB6 759 aaKnown RBP16.66■□□□□ 0.26
SCLT1-204ENST00000503215 RALYQ9UKM9 306 aaKnown RBP16.66■□□□□ 0.26
SCLT1-204ENST00000503215 HS3ST2Q9Y278 367 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 PCDHGB2Q9Y5G2 931 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 ACTL7AQ9Y615 435 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 NYNRINQ9P2P1 1898 aaKnown RBP16.66■□□□□ 0.26
SCLT1-204ENST00000503215 ZZEF1O43149 2961 aa16.66■□□□□ 0.26
SCLT1-204ENST00000503215 GOLGA8CPA6NN73 597 aa16.65■□□□□ 0.26
SCLT1-204ENST00000503215 ENDOD1O94919 500 aa16.65■□□□□ 0.26
SCLT1-204ENST00000503215 TAS2R38P59533 333 aa16.65■□□□□ 0.26
SCLT1-204ENST00000503215 SFSWAPQ12872 951 aaKnown RBP16.65■□□□□ 0.26
SCLT1-204ENST00000503215 CDO1Q16878 200 aa16.65■□□□□ 0.26
SCLT1-204ENST00000503215 FKBP15Q5T1M5 1219 aa16.65■□□□□ 0.26
SCLT1-204ENST00000503215 AGBL4Q5VU57 503 aa16.65■□□□□ 0.26
SCLT1-204ENST00000503215 LRSAM1Q6UWE0 723 aa16.65■□□□□ 0.26
SCLT1-204ENST00000503215 LRRC31Q6UY01 552 aa16.65■□□□□ 0.26
SCLT1-204ENST00000503215 GATAD2AQ86YP4 633 aa16.65■□□□□ 0.26
SCLT1-204ENST00000503215 ATP11CQ8NB49 1132 aa16.65■□□□□ 0.26
SCLT1-204ENST00000503215 OR2A12Q8NGT7 310 aa16.65■□□□□ 0.26
SCLT1-204ENST00000503215 SERAC1Q96JX3 654 aa16.65■□□□□ 0.26
SCLT1-204ENST00000503215 HAPLN3Q96S86 360 aa16.65■□□□□ 0.26
SCLT1-204ENST00000503215 PPP1R9BQ96SB3 815 aa16.65■□□□□ 0.26
SCLT1-204ENST00000503215 SPON2Q9BUD6 331 aa16.65■□□□□ 0.26
SCLT1-204ENST00000503215 ACE2Q9BYF1 805 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms