RNA–Protein interactions for RNA: ENST00000498517.5

ARHGEF3-215, Transcript of Rho guanine nucleotide exchange factor 3, human

TSL 5

Gene ARHGEF3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF3-215	ENST00000498517	BRAF	P15056	766 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	NME2	P22392	152 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	MMP8	P22894	467 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	KLRC2	P26717	231 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	TKT	P29401	623 aa	Known RBP	5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	PTPN7	P35236	360 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	PBX3	P40426	434 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	GPD2	P43304	727 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	MAGEA4	P43358	317 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	IFNAR2	P48551	515 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	VPS41	P49754	854 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	BCAT1	P54687	386 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	PSMC1	P62191	440 aa	Known RBP	5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	HTRA4	P83105	476 aa	Predicted RBP	5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	PLCB3	Q01970	1234 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	CREM	Q03060	361 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	BST2	Q10589	180 aa	Known RBP	5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	XRCC4	Q13426	336 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	MAMLD1	Q13495	774 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	ZNF268	Q14587	947 aa	Predicted RBP	5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	TRIP13	Q15645	432 aa	Predicted RBP	5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	TAF12	Q16514	161 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	KYNU	Q16719	465 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	CCDC38	Q502W7	563 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	SLC39A12	Q504Y0	691 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	C2CD6	Q53TS8	623 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	ZFYVE27	Q5T4F4	411 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	LRRC38	Q5VT99	294 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	ARHGAP17	Q68EM7	881 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	OR6B2	Q6IFH4	312 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	HIBCH	Q6NVY1	386 aa	Predicted RBP	5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	DNAJC24	Q6P3W2	148 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	DRICH1	Q6PGQ1	229 aa	Predicted RBP	5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	DCUN1D2	Q6PH85	259 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	VSTM1	Q6UX27	236 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	CD300LG	Q6UXG3	332 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	ARHGEF18	Q6ZSZ5	1173 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	GSTA5	Q7RTV2	222 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	DDX53	Q86TM3	631 aa	Known RBP	5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	OSTM1	Q86WC4	334 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	C12orf40	Q86WS4	652 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	ZDHHC17	Q8IUH5	632 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	VPS52	Q8N1B4	723 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	SIX6OS1	Q8N1H7	587 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	ZCCHC9	Q8N567	271 aa	Known RBP	5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	ANKRD42	Q8N9B4	389 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	MICAL1	Q8TDZ2	1067 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	C2orf15	Q8WU43	125 aa	Known RBP	5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	CKAP2	Q8WWK9	683 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	TFAP2B	Q92481	460 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	VWCE	Q96DN2	955 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	LIN37	Q96GY3	246 aa	Predicted RBP	5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	HSFY1	Q96LI6	401 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	DMRTB1	Q96MA1	342 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	CFAP57	Q96MR6	1250 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	TTC25	Q96NG3	672 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	SLITRK1	Q96PX8	696 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	TWNK	Q96RR1	684 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	ELAC2	Q9BQ52	826 aa	Known RBP	5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	DUSP16	Q9BY84	665 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	GPR62	Q9BZJ7	368 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	DPEP3	Q9H4B8	488 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	LRRC4	Q9HBW1	653 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	SSU72	Q9NP77	194 aa	Known RBP	5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	KCNK9	Q9NPC2	374 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	C19orf73	Q9NVV2	129 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	HAUS2	Q9NVX0	235 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	NKIRAS1	Q9NYS0	192 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	DRG1	Q9Y295	367 aa	Known RBP	5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	PCDHB5	Q9Y5E4	795 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	MRPL42	Q9Y6G3	142 aa	Known RBP	5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	ALPK3	Q96L96	1907 aa		5.76	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	MYBPHL	A2RUH7	354 aa		5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	CFAP73	A6NFT4	308 aa		5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	PRR33	A8MZF0	331 aa		5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517		F8W810	466 aa		5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	CHUK	O15111	745 aa		5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	FBXO24	O75426	580 aa		5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	FGF18	O76093	207 aa		5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	SUN1	O94901	812 aa		5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	CXCL14	O95715	111 aa		5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	OAS1	P00973	400 aa	Known RBP	5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	UROD	P06132	367 aa		5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	RB1	P06400	928 aa		5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	KRT3	P12035	628 aa		5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	LCP1	P13796	627 aa		5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	CCDC130	P13994	396 aa		5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	BDNF	P23560	247 aa		5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	IGFBP6	P24592	240 aa	Predicted RBP	5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	STX2	P32856	288 aa		5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	CDH5	P33151	784 aa	Predicted RBP	5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	OR1D2	P34982	312 aa		5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	CTNNB1	P35222	781 aa		5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	RDX	P35241	583 aa	Known RBP	5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	BMPR1A	P36894	532 aa		5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	MAGEA10	P43363	369 aa	Predicted RBP	5.75	□□□□□ -1.49
ARHGEF3-215	ENST00000498517	TUFM	P49411	452 aa	Known RBP	5.75	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms