RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 PCLAFQ15004 111 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 GSTA3Q16772 222 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 KAZNQ674X7 775 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 POLNQ7Z5Q5 900 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 DNAAF5Q86Y56 855 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 SIRT6Q8N6T7 355 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 C11orf65Q8NCR3 313 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 ZNF653Q96CK0 615 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 GCNAQ96QF7 691 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 USP29Q9HBJ7 922 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 LTB4R2Q9NPC1 389 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 SNX15Q9NRS6 342 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 ACAD8Q9UKU7 415 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 ZFR2Q9UPR6 939 aaKnown RBP8.72□□□□□ -1.01
SNX13-212ENST00000498463 B3GNT3Q9Y2A9 372 aa8.72□□□□□ -1.01
SNX13-212ENST00000498463 ZFP37Q9Y6Q3 630 aaPredicted RBP8.72□□□□□ -1.01
SNX13-212ENST00000498463 EIF3CLB5ME19 914 aaKnown RBP8.71□□□□□ -1.02
SNX13-212ENST00000498463 SNAP23O00161 211 aa8.71□□□□□ -1.02
SNX13-212ENST00000498463 SLC7A4O43246 635 aa8.71□□□□□ -1.02
SNX13-212ENST00000498463 NCR1O76036 304 aa8.71□□□□□ -1.02
SNX13-212ENST00000498463 C1RP00736 705 aa8.71□□□□□ -1.02
SNX13-212ENST00000498463 CALRP27797 417 aaKnown RBP8.71□□□□□ -1.02
SNX13-212ENST00000498463 ITPKBP27987 946 aa8.71□□□□□ -1.02
SNX13-212ENST00000498463 SLC15A1P46059 708 aa8.71□□□□□ -1.02
SNX13-212ENST00000498463 CLK3P49761 638 aaKnown RBP8.71□□□□□ -1.02
SNX13-212ENST00000498463 RRP1P56182 461 aaKnown RBP8.71□□□□□ -1.02
SNX13-212ENST00000498463 FAM189BP81408 668 aa8.71□□□□□ -1.02
SNX13-212ENST00000498463 RBP5P82980 135 aa8.71□□□□□ -1.02
SNX13-212ENST00000498463 NIPAL4Q0D2K0 466 aa8.71□□□□□ -1.02
SNX13-212ENST00000498463 RRP1BQ14684 758 aaKnown RBP8.71□□□□□ -1.02
SNX13-212ENST00000498463 LAS2Q8IYD9 372 aa8.71□□□□□ -1.02
SNX13-212ENST00000498463 CNPY4Q8N129 248 aa8.71□□□□□ -1.02
SNX13-212ENST00000498463 CPXM2Q8N436 756 aa8.71□□□□□ -1.02
SNX13-212ENST00000498463 ZBTB8BQ8NAP8 495 aaPredicted RBP8.71□□□□□ -1.02
SNX13-212ENST00000498463 TDRD5Q8NAT2 981 aaKnown RBP8.71□□□□□ -1.02
SNX13-212ENST00000498463 POGLUT1Q8NBL1 392 aa8.71□□□□□ -1.02
SNX13-212ENST00000498463 ADPRHL1Q8NDY3 354 aa8.71□□□□□ -1.02
SNX13-212ENST00000498463 SETD9Q8NE22 299 aa8.71□□□□□ -1.02
SNX13-212ENST00000498463 PGAM5Q96HS1 289 aa8.71□□□□□ -1.02
SNX13-212ENST00000498463 NCAPGQ9BPX3 1015 aa8.71□□□□□ -1.02
SNX13-212ENST00000498463 XAB2Q9HCS7 855 aaKnown RBP8.71□□□□□ -1.02
SNX13-212ENST00000498463 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.71□□□□□ -1.02
SNX13-212ENST00000498463 RRP7BPQ9NSQ0 103 aa8.71□□□□□ -1.02
SNX13-212ENST00000498463 UPB1Q9UBR1 384 aa8.71□□□□□ -1.02
SNX13-212ENST00000498463 GTF3C4Q9UKN8 822 aa8.71□□□□□ -1.02
SNX13-212ENST00000498463 PKP3Q9Y446 797 aa8.71□□□□□ -1.02
SNX13-212ENST00000498463 CCL27Q9Y4X3 112 aa8.71□□□□□ -1.02
SNX13-212ENST00000498463 CDRT15L2A8MXV6 281 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 FOXS1O43638 330 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 GGPS1O95749 300 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 BAG2O95816 211 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 ONECUT2O95948 504 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 KRT1P04264 644 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 ALDOCP09972 364 aaKnown RBP8.7□□□□□ -1.02
SNX13-212ENST00000498463 PRR35P0CG20 571 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 CAPZA2P47755 286 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 BFSP1Q12934 665 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 RESTQ13127 1097 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 FBXO43Q4G163 708 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 PLBD1Q6P4A8 553 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 DCLRE1AQ6PJP8 1040 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 PLPPR4Q7Z2D5 763 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 TADA2BQ86TJ2 420 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 TICAM1Q8IUC6 712 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 IL17RCQ8NAC3 791 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 MSANTD4Q8NCY6 345 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 HSPH1Q92598 858 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 SAT2Q96F10 170 aaPredicted RBP8.7□□□□□ -1.02
SNX13-212ENST00000498463 LOXL4Q96JB6 756 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 GLIS2Q9BZE0 524 aaPredicted RBP8.7□□□□□ -1.02
SNX13-212ENST00000498463 ANKRD2Q9GZV1 360 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 IKZF4Q9H2S9 585 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 CD320Q9NPF0 282 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 SNTG1Q9NSN8 517 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 NCKIPSDQ9NZQ3 722 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 DKK3Q9UBP4 350 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 RASAL2Q9UJF2 1139 aa8.7□□□□□ -1.02
SNX13-212ENST00000498463 CDKL5O76039 1030 aa8.69□□□□□ -1.02
SNX13-212ENST00000498463 ATP6V1B1P15313 513 aa8.69□□□□□ -1.02
SNX13-212ENST00000498463 GSTM2P28161 218 aa8.69□□□□□ -1.02
SNX13-212ENST00000498463 PTPN9P43378 593 aa8.69□□□□□ -1.02
SNX13-212ENST00000498463 PDE1AP54750 535 aa8.69□□□□□ -1.02
SNX13-212ENST00000498463 NXPH1P58417 271 aa8.69□□□□□ -1.02
SNX13-212ENST00000498463 NT5DC1Q5TFE4 455 aa8.69□□□□□ -1.02
SNX13-212ENST00000498463 USP51Q70EK9 711 aa8.69□□□□□ -1.02
SNX13-212ENST00000498463 AKAP1Q92667 903 aaKnown RBP eCLIP8.69□□□□□ -1.02
SNX13-212ENST00000498463 GTF3C6Q969F1 213 aa8.69□□□□□ -1.02
SNX13-212ENST00000498463 CDHR1Q96JP9 859 aa8.69□□□□□ -1.02
SNX13-212ENST00000498463 SFXN1Q9H9B4 322 aa8.69□□□□□ -1.02
SNX13-212ENST00000498463 DBNDD1Q9H9R9 158 aa8.69□□□□□ -1.02
SNX13-212ENST00000498463 AKIP1Q9NQ31 210 aa8.69□□□□□ -1.02
SNX13-212ENST00000498463 KIAA1456Q9P272 454 aa8.69□□□□□ -1.02
SNX13-212ENST00000498463 CCNL1Q9UK58 526 aaPredicted RBP8.69□□□□□ -1.02
SNX13-212ENST00000498463 AMFRQ9UKV5 643 aa8.69□□□□□ -1.02
SNX13-212ENST00000498463 MTMR6Q9Y217 621 aa8.69□□□□□ -1.02
SNX13-212ENST00000498463 PTRH2Q9Y3E5 179 aaKnown RBP8.69□□□□□ -1.02
SNX13-212ENST00000498463 TRPV2Q9Y5S1 764 aa8.69□□□□□ -1.02
SNX13-212ENST00000498463 XDHP47989 1333 aa8.69□□□□□ -1.02
SNX13-212ENST00000498463 ADGRA2Q96PE1 1338 aa8.69□□□□□ -1.02
SNX13-212ENST00000498463 GAGE12BA1L429 117 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms