RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 LMO1P25800 156 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 SOX2P48431 317 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 MCM2P49736 904 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 RIPK4P57078 832 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 SF3A3Q12874 501 aaKnown RBP eCLIP5.33□□□□□ -1.56
SSR3-209ENST00000498205 ETFDHQ16134 617 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 LIPMQ5VYY2 423 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 TBC1D3GQ6DHY5 549 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 TANGO2Q6ICL3 276 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 TBC1D3CQ6IPX1 549 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 SHC4Q6S5L8 630 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 DHRS13Q6UX07 377 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 SLC44A2Q8IWA5 706 aaPredicted RBP5.33□□□□□ -1.56
SSR3-209ENST00000498205 TBC1D3Q8IZP1 549 aaPredicted RBP5.33□□□□□ -1.56
SSR3-209ENST00000498205 NANOGP1Q8N7R0 232 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 OR52N4Q8NGI2 321 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 POF1BQ8WVV4 589 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 HMGB4Q8WW32 186 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 TRMT61AQ96FX7 289 aaKnown RBP5.33□□□□□ -1.56
SSR3-209ENST00000498205 PRAM1Q96QH2 718 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 MLXIPQ9HAP2 919 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 BABAM1Q9NWV8 329 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 NDUFAF4Q9P032 175 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 POLKQ9UBT6 870 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 CNTN6Q9UQ52 1028 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 B3GNT3Q9Y2A9 372 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 LAS1LQ9Y4W2 734 aaKnown RBP5.33□□□□□ -1.56
SSR3-209ENST00000498205 RGPD1P0DJD0 1748 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 RIMS1Q86UR5 1692 aaKnown RBP5.33□□□□□ -1.56
SSR3-209ENST00000498205 OVOS2A0A0J9YW53 1432 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 OVOS2Q6IE36 1432 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 SSH2Q76I76 1423 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 PTPRUQ92729 1446 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 RTL1A6NKG5 1358 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 KDRP35968 1356 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 ITSN1Q15811 1721 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 PTPRCP08575 1304 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 CNTN5O94779 1100 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 ST6GAL1P15907 406 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 PCP4P48539 62 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 SLC37A1P57057 533 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 TAS2R50P59544 299 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 RPL15P61313 204 aaKnown RBP5.32□□□□□ -1.56
SSR3-209ENST00000498205 B4GALNT1Q00973 533 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 RBMS2Q15434 407 aaKnown RBP5.32□□□□□ -1.56
SSR3-209ENST00000498205 CCDC38Q502W7 563 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 ISM2Q6H9L7 571 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 ERAP2Q6P179 960 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 ZNF474Q6S9Z5 364 aaPredicted RBP5.32□□□□□ -1.56
SSR3-209ENST00000498205 LRIG3Q6UXM1 1119 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 CHD1LQ86WJ1 897 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 ADGRF4Q8IZF3 695 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 ATG16L2Q8NAA4 619 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 SCARB1Q8WTV0 552 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 FRAT1Q92837 279 aaPredicted RBP5.32□□□□□ -1.56
SSR3-209ENST00000498205 CLMNQ96JQ2 1002 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 GPR78Q96P69 363 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 FCRL4Q96PJ5 515 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 RPS6KC1Q96S38 1066 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 NPAS1Q99742 590 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 ABHD14AQ9BUJ0 271 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 CDK19Q9BWU1 502 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 TMEM120AQ9BXJ8 343 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 CHMP4AQ9BY43 222 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 PRDM8Q9NQV8 689 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 TMEM45AQ9NWC5 275 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 MTMR4Q9NYA4 1195 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 LRFN1Q9P244 771 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 RNF7Q9UBF6 113 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 BAG5Q9UL15 447 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 SLC12A4Q9UP95 1085 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 SLC8A2Q9UPR5 921 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 TNFRSF18Q9Y5U5 241 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 LMTK3Q96Q04 1460 aa5.32□□□□□ -1.56
SSR3-209ENST00000498205 N4BP2Q86UW6 1770 aaPredicted RBP5.32□□□□□ -1.56
SSR3-209ENST00000498205 TTC21AQ8NDW8 1320 aa5.31□□□□□ -1.56
SSR3-209ENST00000498205 SLC22A23A1A5C7 686 aa5.31□□□□□ -1.56
SSR3-209ENST00000498205 DPPA5A6NC42 116 aa5.31□□□□□ -1.56
SSR3-209ENST00000498205 FAM90A18PA6NE21 464 aa5.31□□□□□ -1.56
SSR3-209ENST00000498205 FAM90A16PA6NEW6 464 aa5.31□□□□□ -1.56
SSR3-209ENST00000498205 FAM90A9PA6NNJ1 464 aa5.31□□□□□ -1.56
SSR3-209ENST00000498205 SLC38A8A6NNN8 435 aa5.31□□□□□ -1.56
SSR3-209ENST00000498205 FAM90A5PA8MXJ8 464 aa5.31□□□□□ -1.56
SSR3-209ENST00000498205 ACKR2O00590 384 aa5.31□□□□□ -1.56
SSR3-209ENST00000498205 HTATSF1O43719 755 aaKnown RBP5.31□□□□□ -1.56
SSR3-209ENST00000498205 FRAT2O75474 233 aaPredicted RBP5.31□□□□□ -1.56
SSR3-209ENST00000498205 TNFRSF6BO95407 300 aa5.31□□□□□ -1.56
SSR3-209ENST00000498205 RFPL3SP0C7P2 107 aa5.31□□□□□ -1.56
SSR3-209ENST00000498205 FAM90A15PP0C7V4 464 aa5.31□□□□□ -1.56
SSR3-209ENST00000498205 FAM90A14PP0C7W9 464 aa5.31□□□□□ -1.56
SSR3-209ENST00000498205 GALNT1Q10472 559 aaPredicted RBP5.31□□□□□ -1.56
SSR3-209ENST00000498205 RPS6KA2Q15349 733 aa5.31□□□□□ -1.56
SSR3-209ENST00000498205 GPR162Q16538 588 aa5.31□□□□□ -1.56
SSR3-209ENST00000498205 ZNF793Q6ZN11 406 aa5.31□□□□□ -1.56
SSR3-209ENST00000498205 RHPN2Q8IUC4 686 aa5.31□□□□□ -1.56
SSR3-209ENST00000498205 RPAP2Q8IXW5 612 aaPredicted RBP5.31□□□□□ -1.56
SSR3-209ENST00000498205 CACNA2D3Q8IZS8 1091 aa5.31□□□□□ -1.56
SSR3-209ENST00000498205 PAQR4Q8N4S7 273 aaPredicted RBP5.31□□□□□ -1.56
SSR3-209ENST00000498205 ARFGAP1Q8N6T3 406 aa5.31□□□□□ -1.56
SSR3-209ENST00000498205 SLC44A5Q8NCS7 719 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms