RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 IGSF8Q969P0 613 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 STAMBPL1Q96FJ0 436 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 HMCESQ96FZ2 354 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 PRICKLE1Q96MT3 831 aaPredicted RBP8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 TSGA13Q96PP4 275 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 PPP1R2P1Q96PQ5 205 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 XPO6Q96QU8 1125 aaKnown RBP8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 RAD9AQ99638 391 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 LBHD1Q9BQE6 289 aaPredicted RBP8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 GORASP1Q9BQQ3 440 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 HTATIP2Q9BUP3 242 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 LRRC40Q9H9A6 602 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 TLR9Q9NR96 1032 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 SYBUQ9NX95 663 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 EURLQ9NYK6 297 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 SAMD15Q9P1V8 674 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 FETUBQ9UGM5 382 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 LZTS1Q9Y250 596 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 ASB3Q9Y575 518 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 MYO9BQ13459 2157 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 PIKFYVEQ9Y2I7 2098 aa8.25□□□□□ -1.09
PDZRN3-212ENST00000498048 LRRK1Q38SD2 2015 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 GOLGA6L7A0A1B0GV03 622 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 TCRBV9S1A1TA0A576 114 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 TYW5A2RUC4 315 aaKnown RBP8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 LINC01553A4QN01 128 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 MATN3O15232 486 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 MAFKO60675 156 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 LILRB3O75022 631 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 LATS1O95835 1130 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 JCHAINP01591 159 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 CKMP06732 381 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 SPATA31D3P0C874 917 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 CCNB1P14635 433 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 PGAM1P18669 254 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 KRT15P19012 456 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 MGAT1P26572 445 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 GABRR2P28476 465 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 GCAP28676 217 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 CDC25CP30307 473 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 SLC6A4P31645 630 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 CD68P34810 354 aaPredicted RBP8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 GEMP55040 296 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 CYP4F8P98187 520 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 GUCY1A3Q02108 690 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 NR1H3Q13133 447 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 CBLBQ13191 982 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 ZNF235Q14590 738 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 TTC39BQ5VTQ0 682 aaPredicted RBP8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 STEAP4Q687X5 459 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 TTC19Q6DKK2 380 aaPredicted RBP8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 NAPEPLDQ6IQ20 393 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 RFWD3Q6PCD5 774 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 UNC5AQ6ZN44 842 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 SPATA31D4Q6ZUB0 917 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 ZNF771Q7L3S4 317 aaPredicted RBP8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 DNAJB7Q7Z6W7 309 aaPredicted RBP8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 RASSF3Q86WH2 238 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 TMC8Q8IU68 726 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 LRRC49Q8IUZ0 686 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 DENND1CQ8IV53 801 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 IGDCC3Q8IVU1 814 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 SRRM1Q8IYB3 904 aaKnown RBP8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 MPP5Q8N3R9 675 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 KREMEN2Q8NCW0 462 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 PHOSPHO2Q8TCD6 241 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 MAML1Q92585 1016 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 MRPS31Q92665 395 aaKnown RBP8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 DPF3Q92784 378 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 ARHGEF2Q92974 986 aaKnown RBP8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 PABPC5Q96DU9 382 aaKnown RBP8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 MRRFQ96E11 262 aaKnown RBP8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 TEKT5Q96M29 485 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 KLHL5Q96PQ7 755 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 CYTH2Q99418 400 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 IL12RB2Q99665 862 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 EBNA1BP2Q99848 306 aaKnown RBP8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 DDX50Q9BQ39 737 aaKnown RBP8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 MLPHQ9BV36 600 aaPredicted RBP8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 NOL6Q9H6R4 1146 aaKnown RBP8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 IL21Q9HBE4 155 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 ASAH2Q9NR71 780 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 PIH1D1Q9NWS0 290 aaKnown RBP8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 SMPD4Q9NXE4 827 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 IPO11Q9UI26 975 aaKnown RBP8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 RABGEF1Q9UJ41 708 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 LSM7Q9UK45 103 aaKnown RBP8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 PCDHA11Q9Y5I1 949 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 IKBKGQ9Y6K9 419 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 TICRRQ7Z2Z1 1910 aa8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 TCF20Q9UGU0 1960 aaKnown RBP8.24□□□□□ -1.09
PDZRN3-212ENST00000498048 PLXNA2O75051 1894 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 A0A1B0GVM2 712 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 TCAF2A6NFQ2 919 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 A6NNZ2 444 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 CCL16O15467 120 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 PSMD3O43242 534 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 USP12O75317 370 aa8.23□□□□□ -1.09
PDZRN3-212ENST00000498048 ANXA9O76027 345 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms