RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 MAPKAPK2P49137 400 aa18.17■□□□□ 0.5
CHRNA4-206ENST00000498043 SGSHP51688 502 aa18.17■□□□□ 0.5
CHRNA4-206ENST00000498043 GEMIN4P57678 1058 aaKnown RBP18.17■□□□□ 0.5
CHRNA4-206ENST00000498043 RPS24P62847 133 aaKnown RBP18.17■□□□□ 0.5
CHRNA4-206ENST00000498043 SMAD3P84022 425 aaKnown RBP18.17■□□□□ 0.5
CHRNA4-206ENST00000498043 GUCY1A3Q02108 690 aa18.17■□□□□ 0.5
CHRNA4-206ENST00000498043 POLD3Q15054 466 aaPredicted RBP18.17■□□□□ 0.5
CHRNA4-206ENST00000498043 KLHL38Q2WGJ6 581 aa18.17■□□□□ 0.5
CHRNA4-206ENST00000498043 PABPC1LQ4VXU2 614 aaKnown RBP18.17■□□□□ 0.5
CHRNA4-206ENST00000498043 C9orf50Q5SZB4 431 aa18.17■□□□□ 0.5
CHRNA4-206ENST00000498043 GAREM2Q75VX8 874 aa18.17■□□□□ 0.5
CHRNA4-206ENST00000498043 OR52K1Q8NGK4 314 aa18.17■□□□□ 0.5
CHRNA4-206ENST00000498043 ARHGEF2Q92974 986 aaKnown RBP18.17■□□□□ 0.5
CHRNA4-206ENST00000498043 OXNAD1Q96HP4 312 aaPredicted RBP18.17■□□□□ 0.5
CHRNA4-206ENST00000498043 EBNA1BP2Q99848 306 aaKnown RBP18.17■□□□□ 0.5
CHRNA4-206ENST00000498043 CAPS2Q9BXY5 557 aa18.17■□□□□ 0.5
CHRNA4-206ENST00000498043 LAMA3Q16787 3333 aa18.17■□□□□ 0.5
CHRNA4-206ENST00000498043 SPAG6O75602 509 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 ATP5DP30049 168 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 ANO4Q32M45 955 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 RABGAP1LQ5R372 815 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 KCTD11Q693B1 232 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 UNC5AQ6ZN44 842 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 EXOC3L1Q86VI1 746 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 LRRC49Q8IUZ0 686 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 ELMOD1Q8N336 334 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 RIBC1Q8N443 379 aaPredicted RBP18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 SPATA22Q8NHS9 363 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 PABPC5Q96DU9 382 aaKnown RBP18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 STAMBPL1Q96FJ0 436 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 PAFAH2Q99487 392 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 APOL2Q9BQE5 337 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 RBM22Q9NW64 420 aaKnown RBP eCLIP18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 RWDD3Q9Y3V2 267 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 CPQQ9Y646 472 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 NRG2O14511 850 aaPredicted RBP18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 TSPAN3O60637 253 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 GJA1P17302 382 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 IRS1P35568 1242 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 ACVRL1P37023 503 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 CLCN4P51793 760 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 GNGT1P63211 74 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 PRPSAP1Q14558 356 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 KBTBD12Q3ZCT8 623 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 PARP15Q460N3 678 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 EMC10Q5UCC4 262 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 MAB21L3Q8N8X9 362 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 MRPS31Q92665 395 aaKnown RBP18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 CORO1BQ9BR76 489 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 LRRC3Q9BY71 257 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 GLOD4Q9HC38 313 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 SYBUQ9NX95 663 aa18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 PSMC3IPQ9P2W1 217 aaPredicted RBP18.16■□□□□ 0.5
CHRNA4-206ENST00000498043 A0A1W2PRU2 124 aa18.15■□□□□ 0.5
CHRNA4-206ENST00000498043 GRM6O15303 877 aa18.15■□□□□ 0.5
CHRNA4-206ENST00000498043 SUN1O94901 812 aa18.15■□□□□ 0.5
CHRNA4-206ENST00000498043 PEX11BO96011 259 aa18.15■□□□□ 0.5
CHRNA4-206ENST00000498043 MT-CYBP00156 380 aaPredicted RBP18.15■□□□□ 0.5
CHRNA4-206ENST00000498043 MYL4P12829 197 aa18.15■□□□□ 0.5
CHRNA4-206ENST00000498043 HDCP19113 662 aa18.15■□□□□ 0.5
CHRNA4-206ENST00000498043 STX2P32856 288 aa18.15■□□□□ 0.5
CHRNA4-206ENST00000498043 ZXDBP98169 803 aa18.15■□□□□ 0.5
CHRNA4-206ENST00000498043 C5orf22Q49AR2 442 aa18.15■□□□□ 0.5
CHRNA4-206ENST00000498043 STXBP5Q5T5C0 1151 aa18.15■□□□□ 0.5
CHRNA4-206ENST00000498043 ADGRF1Q5T601 910 aa18.15■□□□□ 0.5
CHRNA4-206ENST00000498043 LEKR1Q6ZMV7 388 aa18.15■□□□□ 0.5
CHRNA4-206ENST00000498043 TAOK1Q7L7X3 1001 aa18.15■□□□□ 0.5
CHRNA4-206ENST00000498043 PRPF39Q86UA1 669 aaKnown RBP18.15■□□□□ 0.5
CHRNA4-206ENST00000498043 TDRPQ86YL5 185 aa18.15■□□□□ 0.5
CHRNA4-206ENST00000498043 SRRM1Q8IYB3 904 aaKnown RBP18.15■□□□□ 0.5
CHRNA4-206ENST00000498043 DNAAF3Q8N9W5 541 aa18.15■□□□□ 0.5
CHRNA4-206ENST00000498043 MAML1Q92585 1016 aa18.15■□□□□ 0.5
CHRNA4-206ENST00000498043 CYTH2Q99418 400 aa18.15■□□□□ 0.5
CHRNA4-206ENST00000498043 PSD3Q9NYI0 1048 aa18.15■□□□□ 0.5
CHRNA4-206ENST00000498043 SLC24A2Q9UI40 661 aa18.15■□□□□ 0.5
CHRNA4-206ENST00000498043 MTCL1Q9Y4B5 1905 aaKnown RBP18.15■□□□□ 0.5
CHRNA4-206ENST00000498043 SDR42E2A6NKP2 422 aa18.14■□□□□ 0.5
CHRNA4-206ENST00000498043 ERI2A8K979 691 aaKnown RBP18.14■□□□□ 0.5
CHRNA4-206ENST00000498043 OLFM2O95897 454 aa18.14■□□□□ 0.5
CHRNA4-206ENST00000498043 CKMP06732 381 aa18.14■□□□□ 0.5
CHRNA4-206ENST00000498043 CA3P07451 260 aa18.14■□□□□ 0.5
CHRNA4-206ENST00000498043 CREB1P16220 341 aa18.14■□□□□ 0.5
CHRNA4-206ENST00000498043 MMP13P45452 471 aa18.14■□□□□ 0.5
CHRNA4-206ENST00000498043 PPM1LQ5SGD2 360 aa18.14■□□□□ 0.5
CHRNA4-206ENST00000498043 MDM1Q8TC05 714 aa18.14■□□□□ 0.5
CHRNA4-206ENST00000498043 ADAMTS19Q8TE59 1207 aa18.14■□□□□ 0.5
CHRNA4-206ENST00000498043 ATXN3LQ9H3M9 355 aa18.14■□□□□ 0.5
CHRNA4-206ENST00000498043 LRRC40Q9H9A6 602 aa18.14■□□□□ 0.5
CHRNA4-206ENST00000498043 PPCSQ9HAB8 311 aa18.14■□□□□ 0.5
CHRNA4-206ENST00000498043 ASAH2Q9NR71 780 aa18.14■□□□□ 0.5
CHRNA4-206ENST00000498043 HCFC1R1Q9NWW0 138 aa18.14■□□□□ 0.5
CHRNA4-206ENST00000498043 RANBP2P49792 3224 aaKnown RBP18.14■□□□□ 0.5
CHRNA4-206ENST00000498043 CDH23Q9H251 3354 aa18.14■□□□□ 0.49
CHRNA4-206ENST00000498043 LPXNO60711 386 aa18.14■□□□□ 0.49
CHRNA4-206ENST00000498043 SHOX2O60902 331 aaPredicted RBP18.14■□□□□ 0.49
CHRNA4-206ENST00000498043 CDH4P55283 916 aa18.14■□□□□ 0.49
CHRNA4-206ENST00000498043 SLC10A7Q0GE19 358 aa18.14■□□□□ 0.49
CHRNA4-206ENST00000498043 SERINC3Q13530 473 aa18.14■□□□□ 0.49
CHRNA4-206ENST00000498043 OR52K2Q8NGK3 314 aa18.14■□□□□ 0.49
CHRNA4-206ENST00000498043 AZIN2Q96A70 460 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms