RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 VPS52Q8N1B4 723 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 GALNT16Q8N428 558 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 PAQR4Q8N4S7 273 aaPredicted RBP4.38□□□□□ -1.71
SMC4-225ENST00000497203 OR52N4Q8NGI2 321 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 UCMAQ8WVF2 138 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 ZFPM2Q8WW38 1151 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 ZBTB10Q96DT7 871 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 EFHD1Q9BUP0 239 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 CADM1Q9BY67 442 aaKnown RBP4.38□□□□□ -1.71
SMC4-225ENST00000497203 CTDSP1Q9GZU7 261 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 TTC12Q9H892 705 aaPredicted RBP4.38□□□□□ -1.71
SMC4-225ENST00000497203 VEZTQ9HBM0 779 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 TERF2IPQ9NYB0 399 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 HCN3Q9P1Z3 774 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 KLHL13Q9P2N7 655 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 SWAP70Q9UH65 585 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 IPO11Q9UI26 975 aaKnown RBP4.38□□□□□ -1.71
SMC4-225ENST00000497203 FBXO2Q9UK22 296 aaPredicted RBP4.38□□□□□ -1.71
SMC4-225ENST00000497203 FBXO9Q9UK97 447 aaPredicted RBP4.38□□□□□ -1.71
SMC4-225ENST00000497203 TNFSF13BQ9Y275 285 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 WDR17Q8IZU2 1322 aa4.38□□□□□ -1.71
SMC4-225ENST00000497203 FAM90A7PA6NKC0 464 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 FAM90A22PA8MWA6 464 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 FAM90A12PA8MX19 464 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 FAM90A23PA8MXZ1 464 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 TNPO2O14787 897 aaKnown RBP4.37□□□□□ -1.71
SMC4-225ENST00000497203 STRNO43815 780 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 F9P00740 461 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 CDK4P11802 303 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 CHMP24386 653 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 IDUAP35475 653 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 HNF1BP35680 557 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 GJC1P36383 396 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 ARHGAP25P42331 645 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 NAP1L1P55209 391 aaKnown RBP4.37□□□□□ -1.71
SMC4-225ENST00000497203 CDH15P55291 814 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 C10orf76Q5T2E6 689 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 FAM69AQ5T7M9 428 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 MZT2BQ6NZ67 158 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 MIS18BP1Q6P0N0 1132 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 GJB7Q6PEY0 223 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 SLC30A9Q6PML9 568 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 SLC2A7Q6PXP3 512 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 SLC22A25Q6T423 547 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 MDGA2Q7Z553 956 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 TDRD7Q8NHU6 1098 aaKnown RBP4.37□□□□□ -1.71
SMC4-225ENST00000497203 NFKBIDQ8NI38 313 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 PIGKQ92643 395 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 ADAD1Q96M93 576 aaKnown RBP4.37□□□□□ -1.71
SMC4-225ENST00000497203 ZNF778Q96MU6 729 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 SLC29A3Q9BZD2 475 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 IL21RQ9HBE5 538 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 TXNRD2Q9NNW7 524 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 TLR8Q9NR97 1041 aaKnown RBP4.37□□□□□ -1.71
SMC4-225ENST00000497203 ARL15Q9NXU5 204 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 SLC25A10Q9UBX3 287 aaPredicted RBP4.37□□□□□ -1.71
SMC4-225ENST00000497203 ZNF70Q9UC06 446 aaPredicted RBP4.37□□□□□ -1.71
SMC4-225ENST00000497203 AASSQ9UDR5 926 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 SLC8A2Q9UPR5 921 aa4.37□□□□□ -1.71
SMC4-225ENST00000497203 A0A1W2PPH5 198 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 KCNJ18B7U540 433 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 TEX22C9J3V5 150 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 INO80B-WBP1J3KQ70 363 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 RRHO14718 337 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 SPTLC2O15270 562 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 INPPL1O15357 1258 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 CHRM4P08173 479 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 TFEBP19484 476 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 RPS6KB1P23443 525 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 SOX2P48431 317 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 CCT4P50991 539 aaKnown RBP4.36□□□□□ -1.71
SMC4-225ENST00000497203 SLC12A2P55011 1212 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 KRTAP10-7P60409 375 aaPredicted RBP4.36□□□□□ -1.71
SMC4-225ENST00000497203 MTA1Q13330 715 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 KLF9Q13886 244 aaPredicted RBP4.36□□□□□ -1.71
SMC4-225ENST00000497203 DAZAP2Q15038 168 aaPredicted RBP4.36□□□□□ -1.71
SMC4-225ENST00000497203 ZNF766Q5HY98 468 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 INO80CQ6PI98 192 aaPredicted RBP4.36□□□□□ -1.71
SMC4-225ENST00000497203 ZNF813Q6ZN06 617 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 RBM44Q6ZP01 1051 aaKnown RBP4.36□□□□□ -1.71
SMC4-225ENST00000497203 RTL10Q7L3V2 364 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 R3HCC1LQ7Z5L2 792 aaKnown RBP4.36□□□□□ -1.71
SMC4-225ENST00000497203 KLBQ86Z14 1044 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 CNGA4Q8IV77 575 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 EXD3Q8N9H8 876 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 FAM110DQ8TAY7 271 aaPredicted RBP4.36□□□□□ -1.71
SMC4-225ENST00000497203 ZNF398Q8TD17 642 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 BCAS4Q8TDM0 211 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 ADAMTS15Q8TE58 950 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 C2CD4CQ8TF44 421 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 RUFY2Q8WXA3 655 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 CNOT9Q92600 299 aaKnown RBP4.36□□□□□ -1.71
SMC4-225ENST00000497203 CENPIQ92674 756 aaPredicted RBP4.36□□□□□ -1.71
SMC4-225ENST00000497203 FCRL5Q96RD9 977 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 ZNF347Q96SE7 839 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 GATA5Q9BWX5 397 aaPredicted RBP4.36□□□□□ -1.71
SMC4-225ENST00000497203 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.36□□□□□ -1.71
SMC4-225ENST00000497203 TMEM248Q9NWD8 314 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 TAS2R10Q9NYW0 307 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 RNF7Q9UBF6 113 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms