RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ACTRT1Q8TDG2 376 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 BRD8Q9H0E9 1235 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 STARD13Q9Y3M8 1113 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 F5P12259 2224 aa22.24■■□□□ 1.15
C9orf3-222ENST00000496567 ZSCAN5CA6NGD5 496 aaPredicted RBP22.24■■□□□ 1.15
C9orf3-222ENST00000496567 PGRMC1O00264 195 aaKnown RBP22.24■■□□□ 1.15
C9orf3-222ENST00000496567 PPP1R12AO14974 1030 aaPredicted RBP22.24■■□□□ 1.15
C9orf3-222ENST00000496567 DLDP09622 509 aaKnown RBP22.24■■□□□ 1.15
C9orf3-222ENST00000496567 PECAM1P16284 738 aaPredicted RBP22.24■■□□□ 1.15
C9orf3-222ENST00000496567 GARSP41250 739 aaKnown RBP22.24■■□□□ 1.15
C9orf3-222ENST00000496567 GEMIN4P57678 1058 aaKnown RBP22.24■■□□□ 1.15
C9orf3-222ENST00000496567 ECT2LQ008S8 904 aa22.24■■□□□ 1.15
C9orf3-222ENST00000496567 RETSATQ6NUM9 610 aa22.24■■□□□ 1.15
C9orf3-222ENST00000496567 ZNF592Q92610 1267 aa22.24■■□□□ 1.15
C9orf3-222ENST00000496567 HAUS1Q96CS2 278 aa22.24■■□□□ 1.15
C9orf3-222ENST00000496567 SAE1Q9UBE0 346 aaPredicted RBP22.24■■□□□ 1.15
C9orf3-222ENST00000496567 IPO11Q9UI26 975 aaKnown RBP22.24■■□□□ 1.15
C9orf3-222ENST00000496567 VPS51Q9UID3 782 aa22.24■■□□□ 1.15
C9orf3-222ENST00000496567 SLC25A13Q9UJS0 675 aa22.24■■□□□ 1.15
C9orf3-222ENST00000496567 NDRG2Q9UN36 371 aaKnown RBP22.24■■□□□ 1.15
C9orf3-222ENST00000496567 PLA2G4CQ9UP65 541 aa22.24■■□□□ 1.15
C9orf3-222ENST00000496567 K7EQS6 105 aa22.23■■□□□ 1.15
C9orf3-222ENST00000496567 MAP3K6O95382 1288 aa22.23■■□□□ 1.15
C9orf3-222ENST00000496567 EGFP01133 1207 aa22.23■■□□□ 1.15
C9orf3-222ENST00000496567 OTUD4Q01804 1114 aaKnown RBP22.23■■□□□ 1.15
C9orf3-222ENST00000496567 SLC20A2Q08357 652 aa22.23■■□□□ 1.15
C9orf3-222ENST00000496567 NOMO1Q15155 1222 aa22.23■■□□□ 1.15
C9orf3-222ENST00000496567 KIF18AQ8NI77 898 aa22.23■■□□□ 1.15
C9orf3-222ENST00000496567 ACTL9Q8TC94 416 aa22.23■■□□□ 1.15
C9orf3-222ENST00000496567 KCNV2Q8TDN2 545 aa22.23■■□□□ 1.15
C9orf3-222ENST00000496567 HDAC11Q96DB2 347 aa22.23■■□□□ 1.15
C9orf3-222ENST00000496567 MS4A14Q96JA4 679 aa22.23■■□□□ 1.15
C9orf3-222ENST00000496567 OLFM3Q96PB7 478 aa22.23■■□□□ 1.15
C9orf3-222ENST00000496567 FRMD8P1Q9BZ68 369 aaPredicted RBP22.23■■□□□ 1.15
C9orf3-222ENST00000496567 SP110Q9HB58 689 aa22.23■■□□□ 1.15
C9orf3-222ENST00000496567 LTB4R2Q9NPC1 389 aa22.23■■□□□ 1.15
C9orf3-222ENST00000496567 RRAGDQ9NQL2 400 aaPredicted RBP22.23■■□□□ 1.15
C9orf3-222ENST00000496567 RNF14Q9UBS8 474 aa22.23■■□□□ 1.15
C9orf3-222ENST00000496567 TCRBV7S2A1N4TA0A589 114 aa22.22■■□□□ 1.15
C9orf3-222ENST00000496567 ZNF185O15231 689 aa22.22■■□□□ 1.15
C9orf3-222ENST00000496567 SNAP91O60641 907 aa22.22■■□□□ 1.15
C9orf3-222ENST00000496567 ZMPSTE24O75844 475 aa22.22■■□□□ 1.15
C9orf3-222ENST00000496567 NUMBP49757 651 aa22.22■■□□□ 1.15
C9orf3-222ENST00000496567 ZNF33AQ06730 810 aa22.22■■□□□ 1.15
C9orf3-222ENST00000496567 IL10RBQ08334 325 aa22.22■■□□□ 1.15
C9orf3-222ENST00000496567 XRCC4Q13426 336 aa22.22■■□□□ 1.15
C9orf3-222ENST00000496567 CCINQ13939 588 aa22.22■■□□□ 1.15
C9orf3-222ENST00000496567 DGKKQ5KSL6 1271 aa22.22■■□□□ 1.15
C9orf3-222ENST00000496567 TIGD7Q6NT04 549 aaPredicted RBP22.22■■□□□ 1.15
C9orf3-222ENST00000496567 ADAT2Q7Z6V5 191 aaKnown RBP22.22■■□□□ 1.15
C9orf3-222ENST00000496567 CCNYQ8ND76 341 aa22.22■■□□□ 1.15
C9orf3-222ENST00000496567 TSGA13Q96PP4 275 aa22.22■■□□□ 1.15
C9orf3-222ENST00000496567 TBC1D17Q9HA65 648 aa22.22■■□□□ 1.15
C9orf3-222ENST00000496567 NPC1O15118 1278 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 MAFKO60675 156 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 PRAMEF11O60813 436 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 SRPRAP08240 638 aaKnown RBP22.21■■□□□ 1.15
C9orf3-222ENST00000496567 GLDCP23378 1020 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 CCNCP24863 283 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 NNMTP40261 264 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 LRRC32Q14392 662 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 UBXN2BQ14CS0 331 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 SFTPA1Q8IWL2 248 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 CCDC33Q8N5R6 958 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 EZH1Q92800 747 aaPredicted RBP22.21■■□□□ 1.15
C9orf3-222ENST00000496567 ERVW-1Q9UQF0 538 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 HACD1B0YJ81 288 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 STK25O00506 426 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 MCF2LO15068 1137 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 HNRNPLP14866 589 aaKnown RBP eCLIP22.21■■□□□ 1.158e-11■□□□□ 10.9
C9orf3-222ENST00000496567 PAFAH1B1P43034 410 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 VASPP50552 380 aaPredicted RBP22.21■■□□□ 1.15
C9orf3-222ENST00000496567 ST8SIA6P61647 398 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 ARF5P84085 180 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 PPIDQ08752 370 aaKnown RBP22.21■■□□□ 1.15
C9orf3-222ENST00000496567 ARHGAP36Q6ZRI8 547 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 TRIM67Q6ZTA4 783 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 METTL3Q86U44 580 aaKnown RBP22.21■■□□□ 1.15
C9orf3-222ENST00000496567 SYNPOQ8N3V7 929 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 KDM1BQ8NB78 822 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 CYB5D2Q8WUJ1 264 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 NSMCE1Q8WV22 266 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 TFB1MQ8WVM0 346 aaKnown RBP22.21■■□□□ 1.15
C9orf3-222ENST00000496567 SORCS1Q8WY21 1168 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 ZNF599Q96NL3 588 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 OSBPL6Q9BZF3 934 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 MFSD1Q9H3U5 465 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 HOMER3Q9NSC5 361 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 HS3ST2Q9Y278 367 aa22.21■■□□□ 1.15
C9orf3-222ENST00000496567 NYNRINQ9P2P1 1898 aaKnown RBP22.2■■□□□ 1.14
C9orf3-222ENST00000496567 VCANP13611 3396 aa22.2■■□□□ 1.14
C9orf3-222ENST00000496567 FAM170BA6NMN3 283 aa22.2■■□□□ 1.14
C9orf3-222ENST00000496567 J3KR12 359 aa22.2■■□□□ 1.14
C9orf3-222ENST00000496567 TARSP26639 723 aaKnown RBP22.2■■□□□ 1.14
C9orf3-222ENST00000496567 CTSOP43234 321 aaPredicted RBP22.2■■□□□ 1.14
C9orf3-222ENST00000496567 KIR2DL1P43626 348 aaPredicted RBP22.2■■□□□ 1.14
C9orf3-222ENST00000496567 EIF3EP60228 445 aaKnown RBP22.2■■□□□ 1.14
C9orf3-222ENST00000496567 MRPS21P82921 87 aaKnown RBP22.2■■□□□ 1.14
C9orf3-222ENST00000496567 TRMT11Q7Z4G4 463 aaKnown RBP22.2■■□□□ 1.14
C9orf3-222ENST00000496567 ZC3H18Q86VM9 953 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms