RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 SMCPP49901 116 aaPredicted RBP9.95□□□□□ -0.82
SMARCAL1-213ENST00000496037 MLLT10P55197 1068 aa9.95□□□□□ -0.82
SMARCAL1-213ENST00000496037 EFEMP1Q12805 493 aa9.95□□□□□ -0.82
SMARCAL1-213ENST00000496037 SURF1Q15526 300 aa9.95□□□□□ -0.82
SMARCAL1-213ENST00000496037 C1QL3Q5VWW1 255 aa9.95□□□□□ -0.82
SMARCAL1-213ENST00000496037 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.95□□□□□ -0.82
SMARCAL1-213ENST00000496037 RSRC2Q7L4I2 434 aaKnown RBP9.95□□□□□ -0.82
SMARCAL1-213ENST00000496037 TRIM69Q86WT6 500 aa9.95□□□□□ -0.82
SMARCAL1-213ENST00000496037 ZFAND4Q86XD8 727 aa9.95□□□□□ -0.82
SMARCAL1-213ENST00000496037 ZC3H3Q8IXZ2 948 aaKnown RBP9.95□□□□□ -0.82
SMARCAL1-213ENST00000496037 ZNF548Q8NEK5 533 aaPredicted RBP9.95□□□□□ -0.82
SMARCAL1-213ENST00000496037 ZMIZ2Q8NF64 920 aa9.95□□□□□ -0.82
SMARCAL1-213ENST00000496037 JAKMIP2Q96AA8 810 aa9.95□□□□□ -0.82
SMARCAL1-213ENST00000496037 IFT43Q96FT9 208 aa9.95□□□□□ -0.82
SMARCAL1-213ENST00000496037 DMRTB1Q96MA1 342 aa9.95□□□□□ -0.82
SMARCAL1-213ENST00000496037 CATSPER2Q96P56 530 aa9.95□□□□□ -0.82
SMARCAL1-213ENST00000496037 SMOQ99835 787 aa9.95□□□□□ -0.82
SMARCAL1-213ENST00000496037 CCDC3Q9BQI4 270 aa9.95□□□□□ -0.82
SMARCAL1-213ENST00000496037 DKK3Q9UBP4 350 aa9.95□□□□□ -0.82
SMARCAL1-213ENST00000496037 PCDHA5Q9Y5H7 936 aa9.95□□□□□ -0.82
SMARCAL1-213ENST00000496037 WASF2Q9Y6W5 498 aa9.95□□□□□ -0.82
SMARCAL1-213ENST00000496037 PRAMEF33A0A0G2JMD5 474 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 A0A1W2PQ27 194 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 A0A1W2PQ64 194 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 A0A1W2PQC6 194 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 TARSL2A2RTX5 802 aaKnown RBP9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 K7ELQ4 463 aaPredicted RBP9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 ST8SIA5O15466 376 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 SLC7A4O43246 635 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 JAK2O60674 1132 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 PRAMEF10O60809 474 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 SEMA7AO75326 666 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 BEST1O76090 585 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 ASLP04424 464 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 GARTP22102 1010 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 CD82P27701 267 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 SLC6A4P31645 630 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 TBX4P57082 545 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 DRAP1Q14919 205 aaPredicted RBP9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 IL17AQ16552 155 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 TMEM119Q4V9L6 283 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 ZNF542PQ5EBM4 170 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 PERM1Q5SV97 790 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 C9orf64Q5T6V5 341 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 PAQR9Q6ZVX9 377 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 SV2AQ7L0J3 742 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 GPRIN1Q7Z2K8 1008 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 KIAA0907Q7Z7F0 614 aaPredicted RBP9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 B3GNT8Q7Z7M8 397 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 FAM217AQ8IXS0 508 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 SYCP3Q8IZU3 236 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 FUKQ8N0W3 1084 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 NECAB1Q8N987 351 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 ZNF557Q8N988 423 aaPredicted RBP9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 TMEM145Q8NBT3 493 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 GALNT11Q8NCW6 608 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 ACCSQ96QU6 501 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 IL12RB2Q99665 862 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 PLCD4Q9BRC7 762 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 SLC12A9Q9BXP2 914 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 SALL4Q9UJQ4 1053 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 LOXL2Q9Y4K0 774 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 F8P00451 2351 aa9.94□□□□□ -0.82
SMARCAL1-213ENST00000496037 EDDM13A0A1B0GTR0 161 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 PRR19A6NJB7 356 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 PLRG1O43660 514 aaKnown RBP9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 PRKCGP05129 697 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 FAM200BP0CF97 657 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 CCDC130P13994 396 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 MZF1P28698 734 aaPredicted RBP9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 AKT2P31751 481 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 FGL2Q14314 439 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 DEFB133Q30KQ1 61 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 ZNF720Q7Z2F6 126 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 TRAPPC11Q7Z392 1133 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 DTX1Q86Y01 620 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 WDR49Q8IV35 697 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 FAM114A1Q8IWE2 563 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 GPD1LQ8N335 351 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 ZNF276Q8N554 614 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 TEX19Q8NA77 164 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 OR13H1Q8NG92 308 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 SLC2A14Q8TDB8 520 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 PLD4Q96BZ4 506 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 TMA16Q96EY4 203 aaKnown RBP9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 MYO19Q96H55 970 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 C8orf76Q96K31 380 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 HEXIM2Q96MH2 286 aaKnown RBP9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 TMEM74Q96NL1 305 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 CGRRF1Q99675 332 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 CBWD1Q9BRT8 395 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 FOXP3Q9BZS1 431 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 PCIF1Q9H4Z3 704 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 MRPL44Q9H9J2 332 aaKnown RBP9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 CSNK1G1Q9HCP0 422 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 PREBQ9HCU5 417 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 CLIC5Q9NZA1 410 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 MARCH2Q9P0N8 246 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 FKBPLQ9UIM3 349 aa9.93□□□□□ -0.82
SMARCAL1-213ENST00000496037 CSNK1G3Q9Y6M4 447 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms