RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 CD19P15391 556 aa13.83□□□□□ -0.2
COL1A1-209ENST00000495677 TGM2P21980 687 aa13.83□□□□□ -0.2
COL1A1-209ENST00000495677 HNRNPA2B1P22626 353 aaKnown RBP13.83□□□□□ -0.2
COL1A1-209ENST00000495677 EIF4EBP2Q13542 120 aaPredicted RBP13.83□□□□□ -0.2
COL1A1-209ENST00000495677 STILQ15468 1287 aa13.83□□□□□ -0.2
COL1A1-209ENST00000495677 ZNF284Q2VY69 593 aa13.83□□□□□ -0.2
COL1A1-209ENST00000495677 EDRF1Q3B7T1 1238 aa13.83□□□□□ -0.2
COL1A1-209ENST00000495677 C3orf38Q5JPI3 329 aa13.83□□□□□ -0.2
COL1A1-209ENST00000495677 ZCCHC8Q6NZY4 707 aaKnown RBP13.83□□□□□ -0.2
COL1A1-209ENST00000495677 LGI2Q8N0V4 545 aa13.83□□□□□ -0.2
COL1A1-209ENST00000495677 EXD3Q8N9H8 876 aa13.83□□□□□ -0.2
COL1A1-209ENST00000495677 IFI44Q8TCB0 444 aa13.83□□□□□ -0.2
COL1A1-209ENST00000495677 MAPK15Q8TD08 544 aa13.83□□□□□ -0.2
COL1A1-209ENST00000495677 DQX1Q8TE96 717 aaKnown RBP13.83□□□□□ -0.2
COL1A1-209ENST00000495677 ALG14Q96F25 216 aa13.83□□□□□ -0.2
COL1A1-209ENST00000495677 BTN2A3PQ96KV6 586 aa13.83□□□□□ -0.2
COL1A1-209ENST00000495677 FAM117AQ9C073 453 aa13.83□□□□□ -0.2
COL1A1-209ENST00000495677 OSBPL2Q9H1P3 480 aa13.83□□□□□ -0.2
COL1A1-209ENST00000495677 CA5BQ9Y2D0 317 aa13.83□□□□□ -0.2
COL1A1-209ENST00000495677 TPP1O14773 563 aa13.82□□□□□ -0.2
COL1A1-209ENST00000495677 SLC31A1O15431 190 aa13.82□□□□□ -0.2
COL1A1-209ENST00000495677 TACR2P21452 398 aa13.82□□□□□ -0.2
COL1A1-209ENST00000495677 TBXAS1P24557 533 aaPredicted RBP13.82□□□□□ -0.2
COL1A1-209ENST00000495677 AKT2P31751 481 aa13.82□□□□□ -0.2
COL1A1-209ENST00000495677 ME1P48163 572 aa13.82□□□□□ -0.2
COL1A1-209ENST00000495677 CLN3Q13286 438 aa13.82□□□□□ -0.2
COL1A1-209ENST00000495677 PIP5KL1Q5T9C9 394 aa13.82□□□□□ -0.2
COL1A1-209ENST00000495677 TTC39BQ5VTQ0 682 aaPredicted RBP13.82□□□□□ -0.2
COL1A1-209ENST00000495677 HORMAD1Q86X24 394 aa13.82□□□□□ -0.2
COL1A1-209ENST00000495677 CCAR2Q8N163 923 aaKnown RBP13.82□□□□□ -0.2
COL1A1-209ENST00000495677 ARL14Q8N4G2 192 aa13.82□□□□□ -0.2
COL1A1-209ENST00000495677 OR13H1Q8NG92 308 aa13.82□□□□□ -0.2
COL1A1-209ENST00000495677 WDR48Q8TAF3 677 aa13.82□□□□□ -0.2
COL1A1-209ENST00000495677 CLEC4CQ8WTT0 213 aa13.82□□□□□ -0.2
COL1A1-209ENST00000495677 TFAP2BQ92481 460 aa13.82□□□□□ -0.2
COL1A1-209ENST00000495677 CCNL2Q96S94 520 aaPredicted RBP13.82□□□□□ -0.2
COL1A1-209ENST00000495677 PRMT1Q99873 361 aaKnown RBP13.82□□□□□ -0.2
COL1A1-209ENST00000495677 SEMA3CQ99985 751 aa13.82□□□□□ -0.2
COL1A1-209ENST00000495677 STARD5Q9NSY2 213 aa13.82□□□□□ -0.2
COL1A1-209ENST00000495677 A0A1W2PQU0 124 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 TCAF2A6NFQ2 919 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 EFSO43281 561 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 SART1O43290 800 aaKnown RBP13.81□□□□□ -0.2
COL1A1-209ENST00000495677 IGLV3-25P01717 112 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 APOEP02649 317 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 CSF2P04141 144 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 NTRK1P04629 796 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 RGS7P49802 495 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 INHBCP55103 352 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 NUCB2P80303 420 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 DLG2Q15700 870 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 LINC00303Q3SY05 128 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 POM121L1PQ3SYA9 428 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 CBWD6Q4V339 395 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 CBWD3Q5JTY5 395 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 COLEC12Q5KU26 742 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 CBWD5Q5RIA9 395 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 CXorf57Q6NSI4 855 aaKnown RBP13.81□□□□□ -0.2
COL1A1-209ENST00000495677 GCNT7Q6ZNI0 430 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 PRICKLE2Q7Z3G6 844 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 SLC22A18ASQ8N1D0 253 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 SH2D3CQ8N5H7 860 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 TMIEQ8NEW7 156 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 WDR36Q8NI36 951 aaKnown RBP13.81□□□□□ -0.2
COL1A1-209ENST00000495677 CCDC47Q96A33 483 aaKnown RBP13.81□□□□□ -0.2
COL1A1-209ENST00000495677 ATXN7L3BQ96GX2 97 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 BMFQ96LC9 184 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 TRIM62Q9BVG3 475 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 CALN1Q9BXU9 219 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.81□□□□□ -0.2
COL1A1-209ENST00000495677 XPO7Q9UIA9 1087 aaKnown RBP13.81□□□□□ -0.2
COL1A1-209ENST00000495677 SLC25A13Q9UJS0 675 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 RCOR1Q9UKL0 485 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 ACSL6Q9UKU0 697 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 ATXN7L1Q9ULK2 861 aaPredicted RBP13.81□□□□□ -0.2
COL1A1-209ENST00000495677 NAALADL1Q9UQQ1 740 aa13.81□□□□□ -0.2
COL1A1-209ENST00000495677 HEMK1Q9Y5R4 338 aaPredicted RBP13.81□□□□□ -0.2
COL1A1-209ENST00000495677 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.8□□□□□ -0.2
COL1A1-209ENST00000495677 A6NNZ2 444 aa13.8□□□□□ -0.2
COL1A1-209ENST00000495677 KCNU1A8MYU2 1149 aa13.8□□□□□ -0.2
COL1A1-209ENST00000495677 F5H5T6 163 aa13.8□□□□□ -0.2
COL1A1-209ENST00000495677 SUV39H1O43463 412 aa13.8□□□□□ -0.2
COL1A1-209ENST00000495677 ITGB2P05107 769 aa13.8□□□□□ -0.2
COL1A1-209ENST00000495677 ITGA2BP08514 1039 aa13.8□□□□□ -0.2
COL1A1-209ENST00000495677 SFTPCP11686 197 aa13.8□□□□□ -0.2
COL1A1-209ENST00000495677 MYF5P13349 255 aa13.8□□□□□ -0.2
COL1A1-209ENST00000495677 PDGFRAP16234 1089 aa13.8□□□□□ -0.2
COL1A1-209ENST00000495677 ZNF18P17022 549 aa13.8□□□□□ -0.2
COL1A1-209ENST00000495677 ITGB6P18564 788 aa13.8□□□□□ -0.2
COL1A1-209ENST00000495677 NFATC3Q12968 1075 aa13.8□□□□□ -0.2
COL1A1-209ENST00000495677 ZNF177Q13360 481 aaPredicted RBP13.8□□□□□ -0.2
COL1A1-209ENST00000495677 ACCSLQ4AC99 568 aa13.8□□□□□ -0.2
COL1A1-209ENST00000495677 SYPL2Q5VXT5 272 aa13.8□□□□□ -0.2
COL1A1-209ENST00000495677 RAP1GAP2Q684P5 730 aa13.8□□□□□ -0.2
COL1A1-209ENST00000495677 ATG14Q6ZNE5 492 aa13.8□□□□□ -0.2
COL1A1-209ENST00000495677 RBM44Q6ZP01 1051 aaKnown RBP13.8□□□□□ -0.2
COL1A1-209ENST00000495677 Q6ZSR6 202 aa13.8□□□□□ -0.2
COL1A1-209ENST00000495677 CHSY1Q86X52 802 aa13.8□□□□□ -0.2
COL1A1-209ENST00000495677 ATP6V0D2Q8N8Y2 350 aa13.8□□□□□ -0.2
COL1A1-209ENST00000495677 NOX5Q96PH1 765 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms