RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 TP53INP2Q8IXH6 220 aa19.89■□□□□ 0.77
HDAC4-212ENST00000495497 UMODL1-AS1Q8N2C9 162 aa19.89■□□□□ 0.77
HDAC4-212ENST00000495497 PGBD3Q8N328 593 aa19.89■□□□□ 0.77
HDAC4-212ENST00000495497 DCAF4L2Q8NA75 395 aa19.89■□□□□ 0.77
HDAC4-212ENST00000495497 FAM71BQ8TC56 605 aa19.89■□□□□ 0.77
HDAC4-212ENST00000495497 MYO18AQ92614 2054 aaKnown RBP19.89■□□□□ 0.77
HDAC4-212ENST00000495497 NELL1Q92832 810 aa19.89■□□□□ 0.77
HDAC4-212ENST00000495497 HMCESQ96FZ2 354 aa19.89■□□□□ 0.77
HDAC4-212ENST00000495497 ZNF830Q96NB3 372 aaPredicted RBP19.89■□□□□ 0.77
HDAC4-212ENST00000495497 ACE2Q9BYF1 805 aaPredicted RBP19.89■□□□□ 0.77
HDAC4-212ENST00000495497 MAGEH1Q9H213 219 aa19.89■□□□□ 0.77
HDAC4-212ENST00000495497 MUC22E2RYF6 1773 aaPredicted RBP19.88■□□□□ 0.77
HDAC4-212ENST00000495497 DCLK1O15075 740 aa19.88■□□□□ 0.77
HDAC4-212ENST00000495497 SRCP12931 536 aa19.88■□□□□ 0.77
HDAC4-212ENST00000495497 VAV1P15498 845 aa19.88■□□□□ 0.77
HDAC4-212ENST00000495497 KDELR1P24390 212 aa19.88■□□□□ 0.77
HDAC4-212ENST00000495497 ZNF135P52742 658 aaPredicted RBP19.88■□□□□ 0.77
HDAC4-212ENST00000495497 ARF5P84085 180 aa19.88■□□□□ 0.77
HDAC4-212ENST00000495497 SRSF5Q13243 272 aaKnown RBP19.88■□□□□ 0.77
HDAC4-212ENST00000495497 ACCSLQ4AC99 568 aa19.88■□□□□ 0.77
HDAC4-212ENST00000495497 C11orf63Q6NUN7 778 aa19.88■□□□□ 0.77
HDAC4-212ENST00000495497 DAAM2Q86T65 1068 aa19.88■□□□□ 0.77
HDAC4-212ENST00000495497 RASSF3Q86WH2 238 aa19.88■□□□□ 0.77
HDAC4-212ENST00000495497 RHOT1Q8IXI2 618 aa19.88■□□□□ 0.77
HDAC4-212ENST00000495497 NPWQ8N729 165 aa19.88■□□□□ 0.77
HDAC4-212ENST00000495497 PDLIM2Q96JY6 352 aa19.88■□□□□ 0.77
HDAC4-212ENST00000495497 CALN1Q9BXU9 219 aa19.88■□□□□ 0.77
HDAC4-212ENST00000495497 SLC39A8Q9C0K1 460 aa19.88■□□□□ 0.77
HDAC4-212ENST00000495497 PRSS16Q9NQE7 514 aa19.88■□□□□ 0.77
HDAC4-212ENST00000495497 ZSCAN32Q9NX65 697 aa19.88■□□□□ 0.77
HDAC4-212ENST00000495497 BCCIPQ9P287 314 aaKnown RBP eCLIP19.88■□□□□ 0.77
HDAC4-212ENST00000495497 AXIN1O15169 862 aa19.87■□□□□ 0.77
HDAC4-212ENST00000495497 SMAD6O43541 496 aaKnown RBP19.87■□□□□ 0.77
HDAC4-212ENST00000495497 SIN3BO75182 1162 aa19.87■□□□□ 0.77
HDAC4-212ENST00000495497 ALDH1A2O94788 518 aa19.87■□□□□ 0.77
HDAC4-212ENST00000495497 NDUFV2P19404 249 aa19.87■□□□□ 0.77
HDAC4-212ENST00000495497 HOXA6P31267 233 aa19.87■□□□□ 0.77
HDAC4-212ENST00000495497 COPAP53621 1224 aa19.87■□□□□ 0.77
HDAC4-212ENST00000495497 NRLP54845 237 aa19.87■□□□□ 0.77
HDAC4-212ENST00000495497 PDK2Q15119 407 aa19.87■□□□□ 0.77
HDAC4-212ENST00000495497 DLG2Q15700 870 aa19.87■□□□□ 0.77
HDAC4-212ENST00000495497 HNRNPA1L2Q32P51 320 aaKnown RBP19.87■□□□□ 0.77
HDAC4-212ENST00000495497 WDR5BQ86VZ2 330 aa19.87■□□□□ 0.77
HDAC4-212ENST00000495497 LONP2Q86WA8 852 aa19.87■□□□□ 0.77
HDAC4-212ENST00000495497 CACUL1Q86Y37 369 aa19.87■□□□□ 0.77
HDAC4-212ENST00000495497 ARHGAP12Q8IWW6 846 aa19.87■□□□□ 0.77
HDAC4-212ENST00000495497 SH2D3CQ8N5H7 860 aa19.87■□□□□ 0.77
HDAC4-212ENST00000495497 ATP11CQ8NB49 1132 aa19.87■□□□□ 0.77
HDAC4-212ENST00000495497 KDM1BQ8NB78 822 aa19.87■□□□□ 0.77
HDAC4-212ENST00000495497 FRS2Q8WU20 508 aa19.87■□□□□ 0.77
HDAC4-212ENST00000495497 MKRN2Q9H000 416 aaKnown RBP19.87■□□□□ 0.77
HDAC4-212ENST00000495497 LRRC19Q9H756 370 aa19.87■□□□□ 0.77
HDAC4-212ENST00000495497 EBF1Q9UH73 591 aa19.87■□□□□ 0.77
HDAC4-212ENST00000495497 SUN2Q9UH99 717 aa19.87■□□□□ 0.77
HDAC4-212ENST00000495497 INVSQ9Y283 1065 aa19.87■□□□□ 0.77
HDAC4-212ENST00000495497 LRRD1A4D1F6 860 aa19.86■□□□□ 0.77
HDAC4-212ENST00000495497 GRID2IPA4D2P6 1211 aa19.86■□□□□ 0.77
HDAC4-212ENST00000495497 KDELR3O43731 214 aa19.86■□□□□ 0.77
HDAC4-212ENST00000495497 CD160O95971 181 aa19.86■□□□□ 0.77
HDAC4-212ENST00000495497 KRT1P04264 644 aa19.86■□□□□ 0.77
HDAC4-212ENST00000495497 PTMAP06454 111 aaKnown RBP19.86■□□□□ 0.77
HDAC4-212ENST00000495497 ETFBP38117 255 aa19.86■□□□□ 0.77
HDAC4-212ENST00000495497 NNMTP40261 264 aa19.86■□□□□ 0.77
HDAC4-212ENST00000495497 MARCKSL1P49006 195 aa19.86■□□□□ 0.77
HDAC4-212ENST00000495497 PAPOLAP51003 745 aaKnown RBP19.86■□□□□ 0.77
HDAC4-212ENST00000495497 CAMK2GQ13555 558 aaPredicted RBP19.86■□□□□ 0.77
HDAC4-212ENST00000495497 ANKRD20A8PQ5CZ79 823 aa19.86■□□□□ 0.77
HDAC4-212ENST00000495497 C9orf64Q5T6V5 341 aa19.86■□□□□ 0.77
HDAC4-212ENST00000495497 LRRC38Q5VT99 294 aa19.86■□□□□ 0.77
HDAC4-212ENST00000495497 ARHGAP36Q6ZRI8 547 aa19.86■□□□□ 0.77
HDAC4-212ENST00000495497 TXLNBQ8N3L3 684 aa19.86■□□□□ 0.77
HDAC4-212ENST00000495497 ZBTB44Q8NCP5 570 aa19.86■□□□□ 0.77
HDAC4-212ENST00000495497 PCDH19Q8TAB3 1148 aa19.86■□□□□ 0.77
HDAC4-212ENST00000495497 PTPRN2Q92932 1015 aa19.86■□□□□ 0.77
HDAC4-212ENST00000495497 RNF25Q96BH1 459 aaPredicted RBP19.86■□□□□ 0.77
HDAC4-212ENST00000495497 KCNF1Q9H3M0 494 aa19.86■□□□□ 0.77
HDAC4-212ENST00000495497 EDDM13A0A1B0GTR0 161 aa19.85■□□□□ 0.77
HDAC4-212ENST00000495497 C3orf70A6NLC5 250 aaPredicted RBP19.85■□□□□ 0.77
HDAC4-212ENST00000495497 DFFAO00273 331 aa19.85■□□□□ 0.77
HDAC4-212ENST00000495497 ATP9BO43861 1147 aa19.85■□□□□ 0.77
HDAC4-212ENST00000495497 NDST2P52849 883 aa19.85■□□□□ 0.77
HDAC4-212ENST00000495497 YBEYP58557 167 aaPredicted RBP19.85■□□□□ 0.77
HDAC4-212ENST00000495497 SERINC3Q13530 473 aa19.85■□□□□ 0.77
HDAC4-212ENST00000495497 PARP15Q460N3 678 aa19.85■□□□□ 0.77
HDAC4-212ENST00000495497 AFMIDQ63HM1 303 aa19.85■□□□□ 0.77
HDAC4-212ENST00000495497 RETSATQ6NUM9 610 aa19.85■□□□□ 0.77
HDAC4-212ENST00000495497 TMCO3Q6UWJ1 677 aa19.85■□□□□ 0.77
HDAC4-212ENST00000495497 TMPRSS6Q8IU80 811 aa19.85■□□□□ 0.77
HDAC4-212ENST00000495497 MAP7D3Q8IWC1 876 aa19.85■□□□□ 0.77
HDAC4-212ENST00000495497 LRRC57Q8N9N7 239 aa19.85■□□□□ 0.77
HDAC4-212ENST00000495497 OR2T3Q8NH03 318 aa19.85■□□□□ 0.77
HDAC4-212ENST00000495497 RLN3Q8WXF3 142 aa19.85■□□□□ 0.77
HDAC4-212ENST00000495497 KRT35Q92764 455 aa19.85■□□□□ 0.77
HDAC4-212ENST00000495497 MRGPRX1Q96LB2 322 aa19.85■□□□□ 0.77
HDAC4-212ENST00000495497 ZNF670Q9BS34 389 aa19.85■□□□□ 0.77
HDAC4-212ENST00000495497 FAM126AQ9BYI3 521 aaPredicted RBP19.85■□□□□ 0.77
HDAC4-212ENST00000495497 CD93Q9NPY3 652 aa19.85■□□□□ 0.77
HDAC4-212ENST00000495497 RCOR3Q9P2K3 495 aaPredicted RBP19.85■□□□□ 0.77
HDAC4-212ENST00000495497 GUCA1BQ9UMX6 200 aa19.85■□□□□ 0.77
HDAC4-212ENST00000495497 HS3ST2Q9Y278 367 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms