RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 STAT5BP51692 787 aa15.65■□□□□ 0.1
SDF4-207ENST00000494748 TMED1Q13445 227 aa15.65■□□□□ 0.1
SDF4-207ENST00000494748 SPANXN3Q5MJ09 141 aa15.65■□□□□ 0.1
SDF4-207ENST00000494748 SLC35F5Q8WV83 523 aa15.65■□□□□ 0.1
SDF4-207ENST00000494748 AGAP3Q96P47 875 aa15.65■□□□□ 0.1
SDF4-207ENST00000494748 NRBP2Q9NSY0 501 aa15.65■□□□□ 0.1
SDF4-207ENST00000494748 AP4E1Q9UPM8 1137 aa15.65■□□□□ 0.1
SDF4-207ENST00000494748 COPG1Q9Y678 874 aaKnown RBP15.65■□□□□ 0.1
SDF4-207ENST00000494748 RNF103O00237 685 aa15.65■□□□□ 0.1
SDF4-207ENST00000494748 ZFXP17010 805 aaPredicted RBP15.65■□□□□ 0.1
SDF4-207ENST00000494748 GABRB3P28472 473 aa15.65■□□□□ 0.1
SDF4-207ENST00000494748 ADSLP30566 484 aaPredicted RBP15.65■□□□□ 0.1
SDF4-207ENST00000494748 RPL14P50914 215 aaKnown RBP15.65■□□□□ 0.1
SDF4-207ENST00000494748 CYTH1Q15438 398 aa15.65■□□□□ 0.1
SDF4-207ENST00000494748 ARL13AQ5H913 290 aaPredicted RBP15.65■□□□□ 0.1
SDF4-207ENST00000494748 SEL1L3Q68CR1 1132 aa15.65■□□□□ 0.1
SDF4-207ENST00000494748 STRA8Q7Z7C7 330 aa15.65■□□□□ 0.1
SDF4-207ENST00000494748 NAT9Q9BTE0 207 aa15.65■□□□□ 0.1
SDF4-207ENST00000494748 NMRAL1Q9HBL8 299 aa15.65■□□□□ 0.1
SDF4-207ENST00000494748 DUS2Q9NX74 493 aaKnown RBP15.65■□□□□ 0.1
SDF4-207ENST00000494748 FAM155AB1AL88 458 aaPredicted RBP15.64■□□□□ 0.09
SDF4-207ENST00000494748 TK2O00142 265 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 H2AFYO75367 372 aaKnown RBP15.64■□□□□ 0.09
SDF4-207ENST00000494748 C2P06681 752 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 YBX3P16989 372 aaKnown RBP eCLIP15.64■□□□□ 0.09
SDF4-207ENST00000494748 TFEBP19484 476 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 ATICP31939 592 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 PTPN9P43378 593 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 PGGT1BP53609 377 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 MBTD1Q05BQ5 628 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 DPYSQ14117 519 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 ZSCAN18Q8TBC5 510 aaPredicted RBP15.64■□□□□ 0.09
SDF4-207ENST00000494748 URGCPQ8TCY9 931 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 P2RY11Q96G91 374 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 UHRF1Q96T88 793 aaPredicted RBP15.64■□□□□ 0.09
SDF4-207ENST00000494748 CCT7Q99832 543 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 IL22Q9GZX6 179 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 SEMA6AQ9H2E6 1030 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 RPF1Q9H9Y2 349 aaKnown RBP15.64■□□□□ 0.09
SDF4-207ENST00000494748 GGA3Q9NZ52 723 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 THEGQ9P2T0 379 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 HACD1B0YJ81 288 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 TARM1B6A8C7 271 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 MPOP05164 745 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 KIZQ2M2Z5 673 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 TMEM135Q86UB9 458 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 C7orf31Q8N865 590 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 SNRNP27Q8WVK2 155 aaKnown RBP15.64■□□□□ 0.09
SDF4-207ENST00000494748 LRTOMTQ8WZ04 291 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 ASB9Q96DX5 294 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 ACAD9Q9H845 621 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 NOP56O00567 594 aaKnown RBP15.64■□□□□ 0.09
SDF4-207ENST00000494748 POLBP06746 335 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 GARSP41250 739 aaKnown RBP15.64■□□□□ 0.09
SDF4-207ENST00000494748 GRIA4P48058 902 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 STXBP2Q15833 593 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 BSPRYQ5W0U4 402 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 ZYG11AQ6WRX3 759 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 SETD3Q86TU7 594 aaPredicted RBP15.64■□□□□ 0.09
SDF4-207ENST00000494748 ZBTB8OSQ8IWT0 167 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 HACE1Q8IYU2 909 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 FIBCD1Q8N539 461 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 CNTD1Q8N815 330 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 AFG1LQ8WV93 481 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 HPDLQ96IR7 371 aa15.64■□□□□ 0.09
SDF4-207ENST00000494748 SH3PXD2BA1X283 911 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 KPNA7A9QM74 516 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 TRIM24O15164 1050 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 PIGNO95427 931 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 HSPA1AP0DMV8 641 aaKnown RBP15.63■□□□□ 0.09
SDF4-207ENST00000494748 HSPA1BP0DMV9 641 aaKnown RBP15.63■□□□□ 0.09
SDF4-207ENST00000494748 RPL10P27635 214 aaKnown RBP15.63■□□□□ 0.09
SDF4-207ENST00000494748 MAGEA10P43363 369 aaPredicted RBP15.63■□□□□ 0.09
SDF4-207ENST00000494748 BACE1P56817 501 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 SFSWAPQ12872 951 aaKnown RBP15.63■□□□□ 0.09
SDF4-207ENST00000494748 MXD4Q14582 209 aaPredicted RBP15.63■□□□□ 0.09
SDF4-207ENST00000494748 LPCAT2Q7L5N7 544 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 PTAR1Q7Z6K3 402 aaPredicted RBP15.63■□□□□ 0.09
SDF4-207ENST00000494748 ZNF567Q8N184 647 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 SMYD1Q8NB12 490 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 TBCCD1Q9NVR7 557 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 TNFSF13BQ9Y275 285 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 TDRKHQ9Y2W6 561 aaKnown RBP15.63■□□□□ 0.09
SDF4-207ENST00000494748 TRIM38O00635 465 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 TCN1P20061 433 aaPredicted RBP15.63■□□□□ 0.09
SDF4-207ENST00000494748 ENTPD1P49961 510 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 FRG1Q14331 258 aaKnown RBP15.63■□□□□ 0.09
SDF4-207ENST00000494748 SOWAHAQ2M3V2 549 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 TP53INP2Q8IXH6 220 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 PELI3Q8N2H9 469 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 DUS3LQ96G46 650 aaKnown RBP15.63■□□□□ 0.09
SDF4-207ENST00000494748 MAELQ96JY0 434 aaKnown RBP15.63■□□□□ 0.09
SDF4-207ENST00000494748 HAUS8Q9BT25 410 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 OSBPL11Q9BXB4 747 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 PCDHAC1Q9H158 963 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 SUCOQ9UBS9 1254 aaKnown RBP15.63■□□□□ 0.09
SDF4-207ENST00000494748 IPO11Q9UI26 975 aaKnown RBP15.63■□□□□ 0.09
SDF4-207ENST00000494748 SQORQ9Y6N5 450 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 SHROOM3Q8TF72 1996 aa15.63■□□□□ 0.09
SDF4-207ENST00000494748 STAG3L1P0CL83 205 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms