RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 DRGXA6NNA5 263 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 E9PAM4 449 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 K7ERQ8 282 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 SMAD6O43541 496 aaKnown RBP9.85□□□□□ -0.83
MSH5-218ENST00000494646 CER1O95813 267 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 ADH1BP00325 375 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 C5AR1P21730 350 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 GLDCP23378 1020 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 MAT2AP31153 395 aaKnown RBP9.85□□□□□ -0.83
MSH5-218ENST00000494646 RDXP35241 583 aaKnown RBP9.85□□□□□ -0.83
MSH5-218ENST00000494646 SOX5P35711 763 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 STAT1P42224 750 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 OXCT1P55809 520 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 JAM2P57087 298 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 IL9RQ01113 521 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 FMO1Q01740 532 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 CDR2Q01850 454 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 UBXN1Q04323 297 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 SYCP1Q15431 976 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 C15orf59Q2T9L4 293 aaPredicted RBP9.85□□□□□ -0.83
MSH5-218ENST00000494646 IL27RAQ6UWB1 636 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 LRRC31Q6UY01 552 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 RBM43Q6ZSC3 357 aaKnown RBP9.85□□□□□ -0.83
MSH5-218ENST00000494646 Q6ZVU0 165 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 TFAP2DQ7Z6R9 452 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 SLCO6A1Q86UG4 719 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 FAM131BQ86XD5 332 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 ZNF683Q8IZ20 524 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 SH2D3CQ8N5H7 860 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 ATP11CQ8NB49 1132 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 MSANTD4Q8NCY6 345 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 NEK11Q8NG66 645 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 OR7D4Q8NG98 312 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 OR2T34Q8NGX1 318 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 JOSD2Q8TAC2 188 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 RXFP2Q8WXD0 754 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 OR8D1Q8WZ84 308 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 PGAP3Q96FM1 320 aaPredicted RBP9.85□□□□□ -0.83
MSH5-218ENST00000494646 C1orf74Q96LT6 269 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 SPAG5Q96R06 1193 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 PCDHB18PQ96TA0 734 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 C11orf70Q9BRQ4 267 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 SPON2Q9BUD6 331 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 METTL5Q9NRN9 209 aaKnown RBP9.85□□□□□ -0.83
MSH5-218ENST00000494646 ANO10Q9NW15 660 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 LIMA1Q9UHB6 759 aaKnown RBP9.85□□□□□ -0.83
MSH5-218ENST00000494646 ADAMTS1Q9UHI8 967 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 NOCTQ9UK39 431 aaKnown RBP9.85□□□□□ -0.83
MSH5-218ENST00000494646 PCOLCE2Q9UKZ9 415 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 BTBD3Q9Y2F9 522 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 TBC1D30Q9Y2I9 924 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 SIK3Q9Y2K2 1263 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 DMXL2Q8TDJ6 3036 aa9.85□□□□□ -0.83
MSH5-218ENST00000494646 ZZEF1O43149 2961 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 CFAP47Q6ZTR5 3102 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 H0Y8X5 98 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 GOLGA6L22H0YM25 854 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 RNF103O00237 685 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 ATP9BO43861 1147 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 RTN2O75298 545 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 ENDOD1O94919 500 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 LSM8O95777 96 aaKnown RBP9.84□□□□□ -0.83
MSH5-218ENST00000494646 WNT1P04628 370 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 CYP1A1P04798 512 aaPredicted RBP9.84□□□□□ -0.83
MSH5-218ENST00000494646 PROS1P07225 676 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 FTH1P19P0C7X4 201 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 SRCP12931 536 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 RRM1P23921 792 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 OR1E1P30953 314 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 DRD3P35462 400 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 GRIA4P48058 902 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 ADPRHP54922 357 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 C21orf59P57076 290 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 RACK1P63244 317 aaKnown RBP9.84□□□□□ -0.83
MSH5-218ENST00000494646 KRT83P78385 493 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 CNTN1Q12860 1018 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 MTA1Q13330 715 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 HNRNPDQ14103 355 aaKnown RBP9.84□□□□□ -0.83
MSH5-218ENST00000494646 ELAVL3Q14576 367 aaKnown RBP9.84□□□□□ -0.83
MSH5-218ENST00000494646 SUZ12Q15022 739 aaKnown RBP9.84□□□□□ -0.83
MSH5-218ENST00000494646 UNQ6494/PRO21346Q6UXR6 183 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 LINGO4Q6UY18 593 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 ZNF677Q86XU0 584 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 CHST14Q8NCH0 376 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 PIP4K2CQ8TBX8 421 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 KLK6Q92876 244 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 PSMB7Q99436 277 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 OSGEPQ9NPF4 335 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 AASDHPPTQ9NRN7 309 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 SEPT11Q9NVA2 429 aaKnown RBP9.84□□□□□ -0.83
MSH5-218ENST00000494646 FZD4Q9ULV1 537 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 PAXBP1Q9Y5B6 917 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 ACTL7AQ9Y615 435 aa9.84□□□□□ -0.83
MSH5-218ENST00000494646 TRPM6Q9BX84 2022 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 LRRC10BA6NIK2 292 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 MCF2LO15068 1137 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 CBFA2T3O75081 653 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 TRIM16O95361 564 aa9.83□□□□□ -0.84
MSH5-218ENST00000494646 ATXN1LP0C7T5 689 aaKnown RBP9.83□□□□□ -0.84
MSH5-218ENST00000494646 ZNF883P0CG24 379 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms