RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 VIMP08670 466 aaKnown RBP16.86■□□□□ 0.29
ATG4B-225ENST00000494465 SNRPAP09012 282 aaKnown RBP16.86■□□□□ 0.29
ATG4B-225ENST00000494465 HSPA8P11142 646 aaKnown RBP16.86■□□□□ 0.29
ATG4B-225ENST00000494465 TAC1P20366 129 aa16.86■□□□□ 0.29
ATG4B-225ENST00000494465 PRPSAP1Q14558 356 aa16.86■□□□□ 0.29
ATG4B-225ENST00000494465 CERCAMQ5T4B2 595 aa16.86■□□□□ 0.29
ATG4B-225ENST00000494465 ACBD5Q5T8D3 534 aaPredicted RBP16.86■□□□□ 0.29
ATG4B-225ENST00000494465 CES3Q6UWW8 571 aa16.86■□□□□ 0.29
ATG4B-225ENST00000494465 MARK2Q7KZI7 788 aaKnown RBP16.86■□□□□ 0.29
ATG4B-225ENST00000494465 TMEM135Q86UB9 458 aa16.86■□□□□ 0.29
ATG4B-225ENST00000494465 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.86■□□□□ 0.29
ATG4B-225ENST00000494465 RBM22Q9NW64 420 aaKnown RBP eCLIP16.86■□□□□ 0.294e-6■□□□□ 10.3
ATG4B-225ENST00000494465 SLC17A6Q9P2U8 582 aa16.86■□□□□ 0.29
ATG4B-225ENST00000494465 J3KR12 359 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 ZWINTO95229 277 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 TACR2P21452 398 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 IL9RQ01113 521 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 C5orf22Q49AR2 442 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 FAM133BQ5BKY9 247 aaKnown RBP16.85■□□□□ 0.29
ATG4B-225ENST00000494465 HECTD3Q5T447 861 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 C6orf89Q6UWU4 347 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 NECAB2Q7Z6G3 386 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 CHSY1Q86X52 802 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 TMEM199Q8N511 208 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 DNAAF3Q8N9W5 541 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 TRMT2BQ96GJ1 504 aaKnown RBP16.85■□□□□ 0.29
ATG4B-225ENST00000494465 RPRD1AQ96P16 312 aaPredicted RBP16.85■□□□□ 0.29
ATG4B-225ENST00000494465 TGS1Q96RS0 853 aaKnown RBP16.85■□□□□ 0.29
ATG4B-225ENST00000494465 BFARQ9NZS9 450 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 AAR2Q9Y312 384 aaKnown RBP16.85■□□□□ 0.29
ATG4B-225ENST00000494465 RPS6KL1Q9Y6S9 549 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 OBSL1O75147 1896 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 PLXNA4Q9HCM2 1894 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 RFPL1O75677 317 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 KRT37O76014 449 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 BAIAP3O94812 1187 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 URODP06132 367 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 LINC00271P0C7V0 271 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 PYGBP11216 843 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 SLC6A4P31645 630 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 SPANXN3Q5MJ09 141 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 GKAP1Q5VSY0 366 aaPredicted RBP16.85■□□□□ 0.29
ATG4B-225ENST00000494465 C16orf59Q7L2K0 433 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 OTOP2Q7RTS6 562 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 DNAJC5GQ8N7S2 189 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 TCP10LQ8TDR4 215 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 C12orf65Q9H3J6 166 aaKnown RBP16.85■□□□□ 0.29
ATG4B-225ENST00000494465 DONSONQ9NYP3 566 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 GGA2Q9UJY4 613 aa16.85■□□□□ 0.29
ATG4B-225ENST00000494465 ZCWPW2A0A1B0GU75 182 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 PSMD3O43242 534 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 LILRB3O75022 631 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 POLBP06746 335 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 DNAJB2P25686 324 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 NPY2RP49146 381 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 NEK3P51956 506 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 MTA1Q13330 715 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 BMPR2Q13873 1038 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 NAPEPLDQ6IQ20 393 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 DENND5AQ6IQ26 1287 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 LVRNQ6Q4G3 990 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 YME1L1Q96TA2 773 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 PAIP2Q9BPZ3 127 aaKnown RBP16.84■□□□□ 0.29
ATG4B-225ENST00000494465 FGFR1OP2Q9NVK5 253 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 IL1RAPL1Q9NZN1 696 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 SAMD15Q9P1V8 674 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 SLC17A7Q9P2U7 560 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 TM9SF1O15321 606 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 ACSL4O60488 711 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 USP1O94782 785 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 TPH1P17752 444 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 GBP2P32456 591 aaPredicted RBP16.84■□□□□ 0.29
ATG4B-225ENST00000494465 ADRA1AP35348 466 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 ALDH1A3P47895 512 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 HNRNPDQ14103 355 aaKnown RBP16.84■□□□□ 0.29
ATG4B-225ENST00000494465 ANO4Q32M45 955 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 APOPT1Q96IL0 206 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 RNF38Q9H0F5 515 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 PSAT1Q9Y617 370 aa16.84■□□□□ 0.29
ATG4B-225ENST00000494465 MIA3Q5JRA6 1907 aa16.83■□□□□ 0.29
ATG4B-225ENST00000494465 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.83■□□□□ 0.28
ATG4B-225ENST00000494465 FAM237BA0A1B0GVD1 139 aa16.83■□□□□ 0.28
ATG4B-225ENST00000494465 KRT38O76015 456 aa16.83■□□□□ 0.28
ATG4B-225ENST00000494465 ANXA9O76027 345 aa16.83■□□□□ 0.28
ATG4B-225ENST00000494465 KLKB1P03952 638 aa16.83■□□□□ 0.28
ATG4B-225ENST00000494465 TWF1Q12792 350 aa16.83■□□□□ 0.28
ATG4B-225ENST00000494465 CDH17Q12864 832 aa16.83■□□□□ 0.28
ATG4B-225ENST00000494465 PLD1Q13393 1074 aa16.83■□□□□ 0.28
ATG4B-225ENST00000494465 FRG1Q14331 258 aaKnown RBP16.83■□□□□ 0.28
ATG4B-225ENST00000494465 ZNF449Q6P9G9 518 aa16.83■□□□□ 0.28
ATG4B-225ENST00000494465 RGS9BPQ6ZS82 235 aa16.83■□□□□ 0.28
ATG4B-225ENST00000494465 TMEM150AQ86TG1 271 aa16.83■□□□□ 0.28
ATG4B-225ENST00000494465 LINC00523Q86TU6 105 aa16.83■□□□□ 0.28
ATG4B-225ENST00000494465 TCEAL8Q8IYN2 117 aa16.83■□□□□ 0.28
ATG4B-225ENST00000494465 PSMG2Q969U7 264 aa16.83■□□□□ 0.28
ATG4B-225ENST00000494465 MTBPQ96DY7 904 aa16.83■□□□□ 0.28
ATG4B-225ENST00000494465 CERS2Q96G23 380 aa16.83■□□□□ 0.28
ATG4B-225ENST00000494465 IL22Q9GZX6 179 aa16.83■□□□□ 0.28
ATG4B-225ENST00000494465 IL23AQ9NPF7 189 aa16.83■□□□□ 0.28
ATG4B-225ENST00000494465 TRPM5Q9NZQ8 1165 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms