RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.44□□□□□ -1.06
HDAC6-234ENST00000493923 SLCO1B1Q9Y6L6 691 aa8.44□□□□□ -1.06
HDAC6-234ENST00000493923 DSPP15924 2871 aaKnown RBP8.43□□□□□ -1.06
HDAC6-234ENST00000493923 C2orf72A6NCS6 295 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 KCNJ18B7U540 433 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 XPO1O14980 1071 aaKnown RBP8.43□□□□□ -1.06
HDAC6-234ENST00000493923 SKAP2O75563 359 aaPredicted RBP8.43□□□□□ -1.06
HDAC6-234ENST00000493923 ALDH1A2O94788 518 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 FYNP06241 537 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 LINGO3P0C6S8 592 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 MYZAPP0CAP1 466 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 HLA-EP13747 358 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 LCP1P13796 627 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 PRKCHP24723 683 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 DGKGP49619 791 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 MORC3Q14149 939 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 TRIP4Q15650 581 aaPredicted RBP8.43□□□□□ -1.06
HDAC6-234ENST00000493923 FUT11Q495W5 492 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 HSF5Q4G112 596 aaPredicted RBP8.43□□□□□ -1.06
HDAC6-234ENST00000493923 SGO2Q562F6 1265 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 TRIM61Q5EBN2 209 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 THEMIS2Q5TEJ8 643 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 BSPRYQ5W0U4 402 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 PSAPL1Q6NUJ1 521 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 GJB7Q6PEY0 223 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 TMEM270Q6UE05 265 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 RRAGAQ7L523 313 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 LPCAT2Q7L5N7 544 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 TRIM42Q8IWZ5 723 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 FAM217AQ8IXS0 508 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 CHPFQ8IZ52 775 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 IQCKQ8N0W5 287 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 ZNF366Q8N895 744 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 NELFBQ8WX92 580 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 ZIM3Q96PE6 472 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 RAB3IPQ96QF0 476 aaPredicted RBP8.43□□□□□ -1.06
HDAC6-234ENST00000493923 EPAS1Q99814 870 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 TSG101Q99816 390 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 MKRN2Q9H000 416 aaKnown RBP8.43□□□□□ -1.06
HDAC6-234ENST00000493923 ACP6Q9NPH0 428 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 ABHD10Q9NUJ1 306 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.43□□□□□ -1.06
HDAC6-234ENST00000493923 RMND1Q9NWS8 449 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 WDR35Q9P2L0 1181 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 CYTH4Q9UIA0 394 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 PILRBQ9UKJ0 227 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 SLC12A4Q9UP95 1085 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 WASF3Q9UPY6 502 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 CTNND2Q9UQB3 1225 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 WDR37Q9Y2I8 494 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 EPN1Q9Y6I3 576 aaPredicted RBP8.43□□□□□ -1.06
HDAC6-234ENST00000493923 STON1Q9Y6Q2 735 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 DMXL2Q8TDJ6 3036 aa8.43□□□□□ -1.06
HDAC6-234ENST00000493923 WDFY3Q8IZQ1 3526 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 ANKRD11Q6UB99 2663 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-234ENST00000493923 KHNYNO15037 678 aaKnown RBP8.42□□□□□ -1.06
HDAC6-234ENST00000493923 NDUFA10O95299 355 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 PYGLP06737 847 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 CCDC166P0CW27 439 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 RALAP11233 206 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 VDRP11473 427 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 ENGP17813 658 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 MAOBP27338 520 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 HOXD9P28356 352 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-234ENST00000493923 SLC6A4P31645 630 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 MAPK8P45983 427 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 ATP1A2P50993 1020 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 NOVA1P51513 510 aaKnown RBP8.42□□□□□ -1.06
HDAC6-234ENST00000493923 ZNF132P52740 706 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 BCAT1P54687 386 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 DAOAP59103 153 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 PITX1P78337 314 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-234ENST00000493923 GUCY1A3Q02108 690 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 RPL6Q02878 288 aaKnown RBP8.42□□□□□ -1.06
HDAC6-234ENST00000493923 LRRC63Q05C16 580 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 GOLGA8FQ08AF8 430 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 GOLGA8DPQ0D2H9 430 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 BST2Q10589 180 aaKnown RBP8.42□□□□□ -1.06
HDAC6-234ENST00000493923 ENPP2Q13822 863 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 ZNF234Q14588 700 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 TAF11Q15544 211 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 UAP1L1Q3KQV9 507 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 ACCSLQ4AC99 568 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 SPDYCQ5MJ68 293 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 CCDC122Q5T0U0 273 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 SH3PXD2AQ5TCZ1 1133 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 PEAR1Q5VY43 1037 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-234ENST00000493923 LYSMD4Q5XG99 296 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 NADSYN1Q6IA69 706 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 C8orf74Q6P047 294 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 DENND1BQ6P3S1 775 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 RFWD3Q6PCD5 774 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 LCLAT1Q6UWP7 414 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 KIAA1324Q6UXG2 1013 aaKnown RBP8.42□□□□□ -1.06
HDAC6-234ENST00000493923 CPLX4Q7Z7G2 160 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 CACUL1Q86Y37 369 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 MYLK4Q86YV6 388 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-234ENST00000493923 TRIM59Q8IWR1 403 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 DEFB124Q8NES8 71 aa8.42□□□□□ -1.06
HDAC6-234ENST00000493923 CYB5D2Q8WUJ1 264 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms