RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 METTL11BQ5VVY1 283 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 ADAMTSL2Q86TH1 951 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 AMIGO1Q86WK6 493 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 HID1Q8IV36 788 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 TRIM59Q8IWR1 403 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 GOT1L1Q8NHS2 421 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-205ENST00000493587 ZNF420Q8TAQ5 688 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-205ENST00000493587 SNAPC3Q92966 411 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 ZNF641Q96N77 438 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-205ENST00000493587 IL12RB2Q99665 862 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 SENP7Q9BQF6 1050 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 TMEM121Q9BTD3 319 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 OSBPL11Q9BXB4 747 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 VPS33BQ9H267 617 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 ARHGEF4Q9NR80 690 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 CHST12Q9NRB3 414 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 TFCP2L1Q9NZI6 479 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 SLC17A7Q9P2U7 560 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 PFDN2Q9UHV9 154 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 DNAJC12Q9UKB3 198 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 CDH7Q9ULB5 785 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 SNX7Q9UNH6 387 aa6.99□□□□□ -1.29
VPS13B-205ENST00000493587 TEX51A0A1B0GUA7 166 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 PIAS1O75925 651 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 PRKD3O94806 890 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 SNAP29O95721 258 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 TMEM191BP0C7N4 346 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 CCND2P30279 289 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 NUDT1P36639 197 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 HSD17B2P37059 387 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 NPEPPSP55786 919 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 NLRP11P59045 1033 aaKnown RBP6.98□□□□□ -1.29
VPS13B-205ENST00000493587 DYNLL1P63167 89 aaKnown RBP6.98□□□□□ -1.29
VPS13B-205ENST00000493587 C1QBPQ07021 282 aaKnown RBP6.98□□□□□ -1.29
VPS13B-205ENST00000493587 LRRC41Q15345 812 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 MAPRE2Q15555 327 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 ABCB5Q2M3G0 1257 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 NAALADL2Q58DX5 795 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 MFSD6Q6ZSS7 791 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 PIWIL3Q7Z3Z3 882 aaKnown RBP6.98□□□□□ -1.29
VPS13B-205ENST00000493587 PCGF5Q86SE9 256 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 SLCO6A1Q86UG4 719 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 AADATQ8N5Z0 425 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 ABHD11Q8NFV4 315 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 OR10Z1Q8NGY1 313 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 HM13Q8TCT9 377 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 DENND1AQ8TEH3 1009 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 CYGBQ8WWM9 190 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 TXNDC15Q96J42 360 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 NACC1Q96RE7 527 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 PIP5K1AQ99755 562 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 IARS2Q9NSE4 1012 aaKnown RBP6.98□□□□□ -1.29
VPS13B-205ENST00000493587 IL20Q9NYY1 176 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 REV1Q9UBZ9 1251 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 ZNF701M0R085 212 aaPredicted RBP6.98□□□□□ -1.29
VPS13B-205ENST00000493587 AIM2O14862 343 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 RNGTTO60942 597 aaKnown RBP6.98□□□□□ -1.29
VPS13B-205ENST00000493587 PIGNO95427 931 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 KRT19P08727 400 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 INHBBP09529 407 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 MYCLP12524 364 aaPredicted RBP6.98□□□□□ -1.29
VPS13B-205ENST00000493587 SERPINB5P36952 375 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 HSD17B7P56937 341 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 TBCCQ15814 346 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 FSCBQ5H9T9 825 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 TMPRSS9Q7Z410 1059 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 NECAB2Q7Z6G3 386 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 PTAR1Q7Z6K3 402 aaPredicted RBP6.98□□□□□ -1.29
VPS13B-205ENST00000493587 FAM83AQ86UY5 434 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 MICU2Q8IYU8 434 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 FIBCD1Q8N539 461 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.98□□□□□ -1.29
VPS13B-205ENST00000493587 SDR42E1Q8WUS8 393 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 S100ZQ8WXG8 99 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 ALG3Q92685 438 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 SH3YL1Q96HL8 342 aaPredicted RBP6.98□□□□□ -1.29
VPS13B-205ENST00000493587 REXO5Q96IC2 774 aaKnown RBP6.98□□□□□ -1.29
VPS13B-205ENST00000493587 APOL6Q9BWW8 343 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 C1QTNF7Q9BXJ2 289 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 ZHX3Q9H4I2 956 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 DCP1AQ9NPI6 582 aaPredicted RBP6.98□□□□□ -1.29
VPS13B-205ENST00000493587 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.98□□□□□ -1.29
VPS13B-205ENST00000493587 MGAMO43451 1857 aa6.98□□□□□ -1.29
VPS13B-205ENST00000493587 ISPDA4D126 451 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 KRT87PA6NCN2 255 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 MIF4GDA9UHW6 222 aaKnown RBP6.97□□□□□ -1.29
VPS13B-205ENST00000493587 SNHG28P0DPA3 235 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 DDCP20711 480 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 IL12RB1P42701 662 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 SNX16P57768 344 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 PPP2R5DQ14738 602 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 ALG1LQ6GMV1 187 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 ERAP2Q6P179 960 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 KCTD8Q6ZWB6 473 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 C16orf62Q7Z3J2 963 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 HEATR3Q7Z4Q2 680 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 ZNF354CQ86Y25 554 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 LINC00518Q8N0U6 118 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 LRRC47Q8N1G4 583 aaKnown RBP6.97□□□□□ -1.29
VPS13B-205ENST00000493587 DAGLBQ8NCG7 672 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms