RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 TMC6Q7Z403 805 aa18.17■□□□□ 0.5
NUP50-218ENST00000493456 PPM1KQ8N3J5 372 aa18.17■□□□□ 0.5
NUP50-218ENST00000493456 FAM181AQ8N9Y4 354 aa18.17■□□□□ 0.5
NUP50-218ENST00000493456 IFT43Q96FT9 208 aa18.17■□□□□ 0.5
NUP50-218ENST00000493456 PRMT1Q99873 361 aaKnown RBP18.17■□□□□ 0.5
NUP50-218ENST00000493456 DUSP23Q9BVJ7 150 aa18.17■□□□□ 0.5
NUP50-218ENST00000493456 POPDC2Q9HBU9 364 aa18.17■□□□□ 0.5
NUP50-218ENST00000493456 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.17■□□□□ 0.5
NUP50-218ENST00000493456 NEMP2A6NFY4 417 aa18.16■□□□□ 0.5
NUP50-218ENST00000493456 KCNU1A8MYU2 1149 aa18.16■□□□□ 0.5
NUP50-218ENST00000493456 B8ZZF3 427 aa18.16■□□□□ 0.5
NUP50-218ENST00000493456 RNF225M0QZC1 329 aaPredicted RBP18.16■□□□□ 0.5
NUP50-218ENST00000493456 PMM2O15305 246 aa18.16■□□□□ 0.5
NUP50-218ENST00000493456 KLK10O43240 276 aa18.16■□□□□ 0.5
NUP50-218ENST00000493456 PIAS2O75928 621 aa18.16■□□□□ 0.5
NUP50-218ENST00000493456 TRUB2O95900 331 aaKnown RBP18.16■□□□□ 0.5
NUP50-218ENST00000493456 SLC2A3P11169 496 aa18.16■□□□□ 0.5
NUP50-218ENST00000493456 AKT2P31751 481 aa18.16■□□□□ 0.5
NUP50-218ENST00000493456 GPD2P43304 727 aa18.16■□□□□ 0.5
NUP50-218ENST00000493456 TAS2R38P59533 333 aa18.16■□□□□ 0.5
NUP50-218ENST00000493456 KRT85P78386 507 aa18.16■□□□□ 0.5
NUP50-218ENST00000493456 VAC14Q08AM6 782 aa18.16■□□□□ 0.5
NUP50-218ENST00000493456 POM121L1PQ3SYA9 428 aa18.16■□□□□ 0.5
NUP50-218ENST00000493456 COBLL1Q53SF7 1204 aa18.16■□□□□ 0.5
NUP50-218ENST00000493456 SYPL2Q5VXT5 272 aa18.16■□□□□ 0.5
NUP50-218ENST00000493456 Q6ZVU0 165 aa18.16■□□□□ 0.5
NUP50-218ENST00000493456 CIR1Q86X95 450 aaPredicted RBP18.16■□□□□ 0.5
NUP50-218ENST00000493456 FAM174AQ8TBP5 190 aa18.16■□□□□ 0.5
NUP50-218ENST00000493456 TTC9Q92623 222 aa18.16■□□□□ 0.5
NUP50-218ENST00000493456 RNF34Q969K3 372 aa18.16■□□□□ 0.5
NUP50-218ENST00000493456 APOLD1Q96LR9 279 aa18.16■□□□□ 0.5
NUP50-218ENST00000493456 ABCG4Q9H172 646 aa18.16■□□□□ 0.5
NUP50-218ENST00000493456 CLMPQ9H6B4 373 aa18.16■□□□□ 0.5
NUP50-218ENST00000493456 ASCL3Q9NQ33 180 aa18.16■□□□□ 0.5
NUP50-218ENST00000493456 RMND1Q9NWS8 449 aa18.16■□□□□ 0.5
NUP50-218ENST00000493456 RIOK3O14730 519 aaKnown RBP18.15■□□□□ 0.5
NUP50-218ENST00000493456 SLC31A1O15431 190 aa18.15■□□□□ 0.5
NUP50-218ENST00000493456 GIMD1P0DJR0 217 aa18.15■□□□□ 0.5
NUP50-218ENST00000493456 HNRNPA2B1P22626 353 aaKnown RBP18.15■□□□□ 0.5
NUP50-218ENST00000493456 PRCPP42785 496 aa18.15■□□□□ 0.5
NUP50-218ENST00000493456 FMO5P49326 533 aa18.15■□□□□ 0.5
NUP50-218ENST00000493456 NUMBP49757 651 aa18.15■□□□□ 0.5
NUP50-218ENST00000493456 LRRC63Q05C16 580 aa18.15■□□□□ 0.5
NUP50-218ENST00000493456 CETN1Q12798 172 aa18.15■□□□□ 0.5
NUP50-218ENST00000493456 EIF4EBP2Q13542 120 aaPredicted RBP18.15■□□□□ 0.5
NUP50-218ENST00000493456 DLG2Q15700 870 aa18.15■□□□□ 0.5
NUP50-218ENST00000493456 MEA1Q16626 185 aa18.15■□□□□ 0.5
NUP50-218ENST00000493456 PIP5KL1Q5T9C9 394 aa18.15■□□□□ 0.5
NUP50-218ENST00000493456 HORMAD1Q86X24 394 aa18.15■□□□□ 0.5
NUP50-218ENST00000493456 HSCBQ8IWL3 235 aa18.15■□□□□ 0.5
NUP50-218ENST00000493456 STK32AQ8WU08 396 aa18.15■□□□□ 0.5
NUP50-218ENST00000493456 GRAMD1AQ96CP6 724 aa18.15■□□□□ 0.5
NUP50-218ENST00000493456 MED15Q96RN5 788 aa18.15■□□□□ 0.5
NUP50-218ENST00000493456 MYOCQ99972 504 aa18.15■□□□□ 0.5
NUP50-218ENST00000493456 CALN1Q9BXU9 219 aa18.15■□□□□ 0.5
NUP50-218ENST00000493456 SEMA4CQ9C0C4 833 aa18.15■□□□□ 0.5
NUP50-218ENST00000493456 METTL14Q9HCE5 456 aaKnown RBP18.15■□□□□ 0.5
NUP50-218ENST00000493456 FARP1Q9Y4F1 1045 aaPredicted RBP18.15■□□□□ 0.5
NUP50-218ENST00000493456 A0A1W2PQ27 194 aa18.14■□□□□ 0.49
NUP50-218ENST00000493456 A0A1W2PQ64 194 aa18.14■□□□□ 0.49
NUP50-218ENST00000493456 A0A1W2PQU0 124 aa18.14■□□□□ 0.49
NUP50-218ENST00000493456 SCAMP1O15126 338 aa18.14■□□□□ 0.49
NUP50-218ENST00000493456 PRLRP16471 622 aa18.14■□□□□ 0.49
NUP50-218ENST00000493456 YWHAZP63104 245 aaKnown RBP18.14■□□□□ 0.49
NUP50-218ENST00000493456 GCNT1Q02742 428 aa18.14■□□□□ 0.49
NUP50-218ENST00000493456 MTA1Q13330 715 aa18.14■□□□□ 0.49
NUP50-218ENST00000493456 ZNF284Q2VY69 593 aa18.14■□□□□ 0.49
NUP50-218ENST00000493456 DCP2Q8IU60 420 aaKnown RBP18.14■□□□□ 0.49
NUP50-218ENST00000493456 SH2D3CQ8N5H7 860 aa18.14■□□□□ 0.49
NUP50-218ENST00000493456 OR13H1Q8NG92 308 aa18.14■□□□□ 0.49
NUP50-218ENST00000493456 MAPK15Q8TD08 544 aa18.14■□□□□ 0.49
NUP50-218ENST00000493456 KAT5Q92993 513 aa18.14■□□□□ 0.49
NUP50-218ENST00000493456 ALG14Q96F25 216 aa18.14■□□□□ 0.49
NUP50-218ENST00000493456 CCDC97Q96F63 343 aaPredicted RBP18.14■□□□□ 0.49
NUP50-218ENST00000493456 VCPIP1Q96JH7 1222 aa18.14■□□□□ 0.49
NUP50-218ENST00000493456 CCDC114Q96M63 670 aa18.14■□□□□ 0.49
NUP50-218ENST00000493456 FEM1AQ9BSK4 669 aa18.14■□□□□ 0.49
NUP50-218ENST00000493456 NCKIPSDQ9NZQ3 722 aa18.14■□□□□ 0.49
NUP50-218ENST00000493456 SSUH2Q9Y2M2 353 aa18.14■□□□□ 0.49
NUP50-218ENST00000493456 PIEZO2Q9H5I5 2752 aa18.13■□□□□ 0.49
NUP50-218ENST00000493456 NAV2Q8IVL1 2488 aa18.13■□□□□ 0.49
NUP50-218ENST00000493456 HECTD1Q9ULT8 2610 aa18.13■□□□□ 0.49
NUP50-218ENST00000493456 LY6G6EA0A0G2JKS1 128 aa18.13■□□□□ 0.49
NUP50-218ENST00000493456 ZNF202O95125 648 aa18.13■□□□□ 0.49
NUP50-218ENST00000493456 CCR1P32246 355 aa18.13■□□□□ 0.49
NUP50-218ENST00000493456 HNRNPKP61978 463 aaKnown RBP eCLIP18.13■□□□□ 0.49
NUP50-218ENST00000493456 LY6DQ14210 128 aa18.13■□□□□ 0.49
NUP50-218ENST00000493456 ZNF658Q5TYW1 1059 aaPredicted RBP18.13■□□□□ 0.49
NUP50-218ENST00000493456 ANKRD40Q6AI12 368 aa18.13■□□□□ 0.49
NUP50-218ENST00000493456 FBXL22Q6P050 247 aa18.13■□□□□ 0.49
NUP50-218ENST00000493456 ABI3BPQ7Z7G0 1075 aa18.13■□□□□ 0.49
NUP50-218ENST00000493456 IFI44Q8TCB0 444 aa18.13■□□□□ 0.49
NUP50-218ENST00000493456 RPRD1AQ96P16 312 aaPredicted RBP18.13■□□□□ 0.49
NUP50-218ENST00000493456 SLC4A5Q9BY07 1137 aa18.13■□□□□ 0.49
NUP50-218ENST00000493456 THAP9Q9H5L6 903 aa18.13■□□□□ 0.49
NUP50-218ENST00000493456 FAM204AQ9H8W3 233 aa18.13■□□□□ 0.49
NUP50-218ENST00000493456 DYRK4Q9NR20 520 aa18.13■□□□□ 0.49
NUP50-218ENST00000493456 VPS28Q9UK41 221 aa18.13■□□□□ 0.49
NUP50-218ENST00000493456 HS3ST2Q9Y278 367 aa18.13■□□□□ 0.49
NUP50-218ENST00000493456 U3KQA8 63 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms