RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 MFAP3LO75121 409 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 SIN3BO75182 1162 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 RTN2O75298 545 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 DAB1O75553 588 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 NFATC1O95644 943 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 TRUB2O95900 331 aaKnown RBP6.98□□□□□ -1.29
VPS52-219ENST00000493379 CISD3P0C7P0 127 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 SLC2A3P11169 496 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 CHRNB1P11230 501 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 ARSAP15289 507 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 CDC25BP30305 580 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 GJA4P35212 333 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 OPRD1P41143 372 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 PTPN9P43378 593 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 NSFP46459 744 aaKnown RBP6.98□□□□□ -1.29
VPS52-219ENST00000493379 CXCR3P49682 368 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 ZNF75DP51815 510 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 AMPD2Q01433 879 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 TNK2Q07912 1038 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 GOLGA8FQ08AF8 430 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 GOLGA8DPQ0D2H9 430 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 EFEMP1Q12805 493 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 PPP2R5DQ14738 602 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 TCEAL1Q15170 157 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 ASIC2Q16515 512 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 PCSK7Q16549 785 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 TMEM196Q5HYL7 178 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 ADGRF1Q5T601 910 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 OTUD1Q5VV17 481 aaPredicted RBP6.98□□□□□ -1.29
VPS52-219ENST00000493379 NUGGCQ68CJ6 796 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 OR6B2Q6IFH4 312 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 TRNP1Q6NT89 227 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 ZNF852Q6ZMS4 543 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 RELL1Q8IUW5 271 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 PASD1Q8IV76 773 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 BBS7Q8IWZ6 715 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 YAF2Q8IY57 180 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 DEFB106AQ8N104 65 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 TC2NQ8N9U0 490 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 IPO4Q8TEX9 1081 aaKnown RBP6.98□□□□□ -1.29
VPS52-219ENST00000493379 FNIP1Q8TF40 1166 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 RNF139Q8WU17 664 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 FAM3CQ92520 227 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 GOLGA1Q92805 767 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 P2RY11Q96G91 374 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 ZFYVE19Q96K21 471 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 C1orf74Q96LT6 269 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 TMEM74Q96NL1 305 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 SERPINB11Q96P15 392 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 PRMT1Q99873 361 aaKnown RBP6.98□□□□□ -1.29
VPS52-219ENST00000493379 IER2Q9BTL4 223 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 SLC2A11Q9BYW1 496 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 TRIM5Q9C035 493 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 CEP44Q9C0F1 390 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 EBF3Q9H4W6 596 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 RETREG1Q9H6L5 497 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 LTB4R2Q9NPC1 389 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 HEBP1Q9NRV9 189 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 ABHD10Q9NUJ1 306 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.98□□□□□ -1.29
VPS52-219ENST00000493379 SMPD4Q9NXE4 827 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 ARHGEF38Q9NXL2 777 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 TAS2R14Q9NYV8 317 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.98□□□□□ -1.29
VPS52-219ENST00000493379 GTSE1Q9NYZ3 720 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 ADAM22Q9P0K1 906 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 CALCOCO1Q9P1Z2 691 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 ADAMTS1Q9UHI8 967 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 SLC27A6Q9Y2P4 619 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 MRPS17Q9Y2R5 130 aaKnown RBP6.98□□□□□ -1.29
VPS52-219ENST00000493379 RAXQ9Y2V3 346 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 MSRB2Q9Y3D2 182 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 SH3BP1Q9Y3L3 701 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 NEUROG3Q9Y4Z2 214 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 COL4A2P08572 1712 aa6.98□□□□□ -1.29
VPS52-219ENST00000493379 A0A087X0T9 212 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 TMEM191CA6NGB0 347 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 AKR1B15C9JRZ8 316 aaPredicted RBP6.97□□□□□ -1.29
VPS52-219ENST00000493379 PIK3R2O00459 728 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 CACNG3O60359 315 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 ACSL4O60488 711 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 PAPSS2O95340 614 aaPredicted RBP6.97□□□□□ -1.29
VPS52-219ENST00000493379 LCA5LO95447 670 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 FTLP02792 175 aaPredicted RBP6.97□□□□□ -1.29
VPS52-219ENST00000493379 CYP17A1P05093 508 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 FAM228BP0C875 321 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 MYBL1P10243 752 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 KRT3P12035 628 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 BMP4P12644 408 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 SKILP12757 684 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 CORO1AP31146 461 aaKnown RBP6.97□□□□□ -1.29
VPS52-219ENST00000493379 HOXA6P31267 233 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 GBP1P32455 592 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 RFC1P35251 1148 aaPredicted RBP6.97□□□□□ -1.29
VPS52-219ENST00000493379 FLT3P36888 993 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 IFNAR2P48551 515 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 HARS2P49590 506 aaKnown RBP6.97□□□□□ -1.29
VPS52-219ENST00000493379 GALK1P51570 392 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 TBX4P57082 545 aa6.97□□□□□ -1.29
VPS52-219ENST00000493379 PITX1P78337 314 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms