RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 NAB1Q13506 487 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 FRG1Q14331 258 aaKnown RBP14.34□□□□□ -0.11
PTPN7-216ENST00000492977 HECTD3Q5T447 861 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 IER5LQ5T953 404 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 TAX1BP1Q86VP1 789 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 C4orf33Q8N1A6 199 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 OR52K1Q8NGK4 314 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 MTBPQ96DY7 904 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 TRMT2BQ96GJ1 504 aaKnown RBP14.34□□□□□ -0.11
PTPN7-216ENST00000492977 MAGEB18Q96M61 343 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 NOL6Q9H6R4 1146 aaKnown RBP14.34□□□□□ -0.11
PTPN7-216ENST00000492977 KIF9Q9HAQ2 790 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 CYP4F11Q9HBI6 524 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 GLOD4Q9HC38 313 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 SYBUQ9NX95 663 aa14.34□□□□□ -0.11
PTPN7-216ENST00000492977 IPO11Q9UI26 975 aaKnown RBP14.34□□□□□ -0.11
PTPN7-216ENST00000492977 KRT38O76015 456 aa14.33□□□□□ -0.12
PTPN7-216ENST00000492977 CA4P22748 312 aa14.33□□□□□ -0.12
PTPN7-216ENST00000492977 RENBPP51606 427 aa14.33□□□□□ -0.12
PTPN7-216ENST00000492977 CRADDP78560 199 aa14.33□□□□□ -0.12
PTPN7-216ENST00000492977 SPANXN3Q5MJ09 141 aa14.33□□□□□ -0.12
PTPN7-216ENST00000492977 GKAP1Q5VSY0 366 aaPredicted RBP14.33□□□□□ -0.12
PTPN7-216ENST00000492977 RAP1GAP2Q684P5 730 aa14.33□□□□□ -0.12
PTPN7-216ENST00000492977 TRMT10BQ6PF06 316 aaKnown RBP14.33□□□□□ -0.12
PTPN7-216ENST00000492977 TMCO2Q7Z6W1 182 aaPredicted RBP14.33□□□□□ -0.12
PTPN7-216ENST00000492977 BANPQ8N9N5 519 aa14.33□□□□□ -0.12
PTPN7-216ENST00000492977 DNAAF3Q8N9W5 541 aa14.33□□□□□ -0.12
PTPN7-216ENST00000492977 CDKL2Q92772 493 aa14.33□□□□□ -0.12
PTPN7-216ENST00000492977 IGSF8Q969P0 613 aa14.33□□□□□ -0.12
PTPN7-216ENST00000492977 OXNAD1Q96HP4 312 aaPredicted RBP14.33□□□□□ -0.12
PTPN7-216ENST00000492977 YME1L1Q96TA2 773 aa14.33□□□□□ -0.12
PTPN7-216ENST00000492977 NSRP1Q9H0G5 558 aaKnown RBP14.33□□□□□ -0.12
PTPN7-216ENST00000492977 SMYD2Q9NRG4 433 aa14.33□□□□□ -0.12
PTPN7-216ENST00000492977 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.33□□□□□ -0.12
PTPN7-216ENST00000492977 RBM22Q9NW64 420 aaKnown RBP eCLIP14.33□□□□□ -0.12
PTPN7-216ENST00000492977 TRPM5Q9NZQ8 1165 aa14.33□□□□□ -0.12
PTPN7-216ENST00000492977 TM9SF1O15321 606 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 CNTN5O94779 1100 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 ASMTLO95671 621 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 VIMP08670 466 aaKnown RBP14.32□□□□□ -0.12
PTPN7-216ENST00000492977 CNTFP26441 200 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 ELF1P32519 619 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 RPA3P35244 121 aaPredicted RBP14.32□□□□□ -0.12
PTPN7-216ENST00000492977 MAPKAPK2P49137 400 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 GEMP55040 296 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 WDR4P57081 412 aaKnown RBP14.32□□□□□ -0.12
PTPN7-216ENST00000492977 CREMQ03060 361 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 SLC18A2Q05940 514 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 CDH17Q12864 832 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 HNRNPDQ14103 355 aaKnown RBP14.32□□□□□ -0.12
PTPN7-216ENST00000492977 CRYMQ14894 314 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 VEPH1Q14D04 833 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 TAF12Q16514 161 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 C5orf22Q49AR2 442 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 ALFQ53S48 1182 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 ASTLQ6HA08 431 aaPredicted RBP14.32□□□□□ -0.12
PTPN7-216ENST00000492977 SH2D5Q6ZV89 423 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 MICALCLQ6ZW33 695 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 OTOP3Q7RTS5 596 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 TFAP2DQ7Z6R9 452 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 CHSY1Q86X52 802 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 TCEAL8Q8IYN2 117 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 LRRC34Q8IZ02 419 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 GDAP1Q8TB36 358 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 USP33Q8TEY7 942 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 AZIN2Q96A70 460 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 RPRD1AQ96P16 312 aaPredicted RBP14.32□□□□□ -0.12
PTPN7-216ENST00000492977 TRIM56Q9BRZ2 755 aaKnown RBP14.32□□□□□ -0.12
PTPN7-216ENST00000492977 IL22Q9GZX6 179 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 NACA2Q9H009 215 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 MLXIPLQ9NP71 852 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 IL23AQ9NPF7 189 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 MRPL17Q9NRX2 175 aaKnown RBP14.32□□□□□ -0.12
PTPN7-216ENST00000492977 ZNF212Q9UDV6 495 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 YIPF1Q9Y548 306 aa14.32□□□□□ -0.12
PTPN7-216ENST00000492977 NYNRINQ9P2P1 1898 aaKnown RBP14.32□□□□□ -0.12
PTPN7-216ENST00000492977 F5H5T6 163 aa14.31□□□□□ -0.12
PTPN7-216ENST00000492977 ACSL4O60488 711 aa14.31□□□□□ -0.12
PTPN7-216ENST00000492977 NEBLO76041 1014 aa14.31□□□□□ -0.12
PTPN7-216ENST00000492977 ACRP10323 421 aa14.31□□□□□ -0.12
PTPN7-216ENST00000492977 HSPA8P11142 646 aaKnown RBP14.31□□□□□ -0.12
PTPN7-216ENST00000492977 TACR2P21452 398 aa14.31□□□□□ -0.12
PTPN7-216ENST00000492977 SLC11A2P49281 568 aa14.31□□□□□ -0.12
PTPN7-216ENST00000492977 HARS2P49590 506 aaKnown RBP14.31□□□□□ -0.12
PTPN7-216ENST00000492977 YBEYP58557 167 aaPredicted RBP14.31□□□□□ -0.12
PTPN7-216ENST00000492977 NIPAL4Q0D2K0 466 aa14.31□□□□□ -0.12
PTPN7-216ENST00000492977 QPCTQ16769 361 aa14.31□□□□□ -0.12
PTPN7-216ENST00000492977 PARP15Q460N3 678 aa14.31□□□□□ -0.12
PTPN7-216ENST00000492977 NADSYN1Q6IA69 706 aa14.31□□□□□ -0.12
PTPN7-216ENST00000492977 MARK2Q7KZI7 788 aaKnown RBP14.31□□□□□ -0.12
PTPN7-216ENST00000492977 PIGWQ7Z7B1 504 aa14.31□□□□□ -0.12
PTPN7-216ENST00000492977 TMEM135Q86UB9 458 aa14.31□□□□□ -0.12
PTPN7-216ENST00000492977 PLD4Q96BZ4 506 aa14.31□□□□□ -0.12
PTPN7-216ENST00000492977 PIH1D1Q9NWS0 290 aaKnown RBP14.31□□□□□ -0.12
PTPN7-216ENST00000492977 UXTQ9UBK9 157 aaPredicted RBP14.31□□□□□ -0.12
PTPN7-216ENST00000492977 PCDHB12Q9Y5F1 795 aa14.31□□□□□ -0.12
PTPN7-216ENST00000492977 RPS6KL1Q9Y6S9 549 aa14.31□□□□□ -0.12
PTPN7-216ENST00000492977 FAM237BA0A1B0GVD1 139 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 TCP11X1B4DZS4 312 aa14.3□□□□□ -0.12
PTPN7-216ENST00000492977 TRIM49D1C9J1S8 452 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms