RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 CENPCQ03188 943 aa12.78□□□□□ -0.36
COL6A1-205ENST00000492851 ARL13BQ3SXY8 428 aa12.78□□□□□ -0.36
COL6A1-205ENST00000492851 SETMARQ53H47 684 aaPredicted RBP12.78□□□□□ -0.36
COL6A1-205ENST00000492851 FKBP15Q5T1M5 1219 aa12.78□□□□□ -0.36
COL6A1-205ENST00000492851 NAPEPLDQ6IQ20 393 aa12.78□□□□□ -0.36
COL6A1-205ENST00000492851 RETSATQ6NUM9 610 aa12.78□□□□□ -0.36
COL6A1-205ENST00000492851 DPY19L2P1Q6NXN4 242 aa12.78□□□□□ -0.36
COL6A1-205ENST00000492851 TRIM69Q86WT6 500 aa12.78□□□□□ -0.36
COL6A1-205ENST00000492851 ATP11CQ8NB49 1132 aa12.78□□□□□ -0.36
COL6A1-205ENST00000492851 TMIEQ8NEW7 156 aa12.78□□□□□ -0.36
COL6A1-205ENST00000492851 NAA15Q9BXJ9 866 aaKnown RBP12.78□□□□□ -0.36
COL6A1-205ENST00000492851 CCDC86Q9H6F5 360 aaKnown RBP12.78□□□□□ -0.36
COL6A1-205ENST00000492851 PREBQ9HCU5 417 aa12.78□□□□□ -0.36
COL6A1-205ENST00000492851 DYRK4Q9NR20 520 aa12.78□□□□□ -0.36
COL6A1-205ENST00000492851 FTSJ1Q9UET6 329 aa12.78□□□□□ -0.36
COL6A1-205ENST00000492851 AJAP1Q9UKB5 411 aaPredicted RBP12.78□□□□□ -0.36
COL6A1-205ENST00000492851 PCDHGA1Q9Y5H4 931 aa12.78□□□□□ -0.36
COL6A1-205ENST00000492851 SLCO1B1Q9Y6L6 691 aa12.78□□□□□ -0.36
COL6A1-205ENST00000492851 MAP1BP46821 2468 aaKnown RBP12.77□□□□□ -0.37
COL6A1-205ENST00000492851 IGLV3-10A0A075B6K4 115 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 A0A1W2PR77 199 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 ILVBLA1L0T0 632 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 E9PAM4 449 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 F8VZ95 297 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 PRAMEF26H0Y7S4 382 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 PRNPP04156 253 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 ATXN1LP0C7T5 689 aaKnown RBP12.77□□□□□ -0.37
COL6A1-205ENST00000492851 PNMA6AP0CW24 399 aaPredicted RBP12.77□□□□□ -0.37
COL6A1-205ENST00000492851 DRD3P35462 400 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 RXRGP48443 463 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 SCAPQ12770 1279 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 TRIM72Q6ZMU5 477 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 CLEC17AQ6ZS10 378 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 C14orf80Q86SX3 495 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 PROSER1Q86XN7 944 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 XYLT1Q86Y38 959 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 DCAF4L2Q8NA75 395 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 ANKRD20A12PQ8NF67 263 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 FAM174AQ8TBP5 190 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 PIP4K2CQ8TBX8 421 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 PPP1R16AQ96I34 528 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 EBF2Q9HAK2 575 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 SAMSN1Q9NSI8 373 aaKnown RBP12.77□□□□□ -0.37
COL6A1-205ENST00000492851 TOR4AQ9NXH8 423 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 PPARGC1AQ9UBK2 798 aaKnown RBP12.77□□□□□ -0.37
COL6A1-205ENST00000492851 FHOD1Q9Y613 1164 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 USP24Q9UPU5 2620 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 PCNX2A6NKB5 2137 aa12.77□□□□□ -0.37
COL6A1-205ENST00000492851 CACNA1EQ15878 2313 aa12.76□□□□□ -0.37
COL6A1-205ENST00000492851 SRGAP2O75044 1071 aa12.76□□□□□ -0.37
COL6A1-205ENST00000492851 ENDOD1O94919 500 aa12.76□□□□□ -0.37
COL6A1-205ENST00000492851 LDOC1O95751 146 aaPredicted RBP12.76□□□□□ -0.37
COL6A1-205ENST00000492851 SRCP12931 536 aa12.76□□□□□ -0.37
COL6A1-205ENST00000492851 VAV1P15498 845 aa12.76□□□□□ -0.37
COL6A1-205ENST00000492851 CHRNA3P32297 505 aa12.76□□□□□ -0.37
COL6A1-205ENST00000492851 ETFBP38117 255 aa12.76□□□□□ -0.37
COL6A1-205ENST00000492851 NXPH1P58417 271 aa12.76□□□□□ -0.37
COL6A1-205ENST00000492851 CNTN1Q12860 1018 aa12.76□□□□□ -0.37
COL6A1-205ENST00000492851 HSP90AA4PQ58FG1 418 aa12.76□□□□□ -0.37
COL6A1-205ENST00000492851 KCNT1Q5JUK3 1230 aa12.76□□□□□ -0.37
COL6A1-205ENST00000492851 TAF3Q5VWG9 929 aa12.76□□□□□ -0.37
COL6A1-205ENST00000492851 Q6ZVU0 165 aa12.76□□□□□ -0.37
COL6A1-205ENST00000492851 NOP9Q86U38 636 aaKnown RBP12.76□□□□□ -0.37
COL6A1-205ENST00000492851 ZNF683Q8IZ20 524 aa12.76□□□□□ -0.37
COL6A1-205ENST00000492851 EPS8L1Q8TE68 723 aa12.76□□□□□ -0.37
COL6A1-205ENST00000492851 SAP25Q8TEE9 199 aa12.76□□□□□ -0.37
COL6A1-205ENST00000492851 TBCBQ99426 244 aa12.76□□□□□ -0.37
COL6A1-205ENST00000492851 ZYG11BQ9C0D3 744 aa12.76□□□□□ -0.37
COL6A1-205ENST00000492851 CEP44Q9C0F1 390 aa12.76□□□□□ -0.37
COL6A1-205ENST00000492851 ARHGAP20Q9P2F6 1191 aa12.76□□□□□ -0.37
COL6A1-205ENST00000492851 VPS51Q9UID3 782 aa12.76□□□□□ -0.37
COL6A1-205ENST00000492851 TMEM59LQ9UK28 342 aa12.76□□□□□ -0.37
COL6A1-205ENST00000492851 SARDHQ9UL12 918 aa12.76□□□□□ -0.37
COL6A1-205ENST00000492851 BTBD3Q9Y2F9 522 aa12.76□□□□□ -0.37
COL6A1-205ENST00000492851 GOLGA8CPA6NN73 597 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 GOLGA8SH3BPF8 625 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 BNIP3LO60238 219 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 RTN2O75298 545 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 CNTN5O94779 1100 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 WNT1P04628 370 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 CAPNS1P04632 268 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 ANP32AP39687 249 aaKnown RBP12.75□□□□□ -0.37
COL6A1-205ENST00000492851 STAT1P42224 750 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 GEMIN4P57678 1058 aaKnown RBP12.75□□□□□ -0.37
COL6A1-205ENST00000492851 NOMO3P69849 1222 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 CDR2Q01850 454 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 ILKQ13418 452 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 SMAD1Q15797 465 aaKnown RBP12.75□□□□□ -0.37
COL6A1-205ENST00000492851 ALFQ53S48 1182 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 AGBL4Q5VU57 503 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 OTUD1Q5VV17 481 aaPredicted RBP12.75□□□□□ -0.37
COL6A1-205ENST00000492851 LAYNQ6UX15 382 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 BNIPLQ7Z465 357 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 ZSCAN30Q86W11 494 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 TMPRSS12Q86WS5 348 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 OR52K2Q8NGK3 314 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 OR2A12Q8NGT7 310 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 CPA5Q8WXQ8 436 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 KLHDC7BQ96G42 594 aa12.75□□□□□ -0.37
COL6A1-205ENST00000492851 SPON2Q9BUD6 331 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms