RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 GALNT16Q8N428 558 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 PRSS3P2Q8NHM4 247 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 ZNF398Q8TD17 642 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 DPF1Q92782 380 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 MPHOSPH8Q99549 860 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 INTS2Q9H0H0 1204 aaKnown RBP4.3□□□□□ -1.72
CLK1-213ENST00000492793 TTYH1Q9H313 450 aaPredicted RBP4.3□□□□□ -1.72
CLK1-213ENST00000492793 UNC45AQ9H3U1 944 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 JMJD4Q9H9V9 463 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 IL21RQ9HBE5 538 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 PREBQ9HCU5 417 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 Q9N2J8 555 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 TXNRD2Q9NNW7 524 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 NRIP3Q9NQ35 241 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 SLC22A11Q9NSA0 550 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 TMEM184CQ9NVA4 438 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 TMEM45AQ9NWC5 275 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 CD207Q9UJ71 328 aa4.3□□□□□ -1.72
CLK1-213ENST00000492793 OR6C68A6NDL8 312 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 KCNJ18B7U540 433 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 F8W810 466 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 PER2O15055 1255 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 ATP5F1P24539 256 aaPredicted RBP4.29□□□□□ -1.72
CLK1-213ENST00000492793 ABCD3P28288 659 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 CD38P28907 300 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 DDIT3P35638 169 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 GPD2P43304 727 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 PTPN9P43378 593 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 RPS13P62277 151 aaKnown RBP4.29□□□□□ -1.72
CLK1-213ENST00000492793 RHAGQ02094 409 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 ID2Q02363 134 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 LMOD3Q0VAK6 560 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 PGM5Q15124 567 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 RALBP1Q15311 655 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 SMN1Q16637 294 aaKnown RBP4.29□□□□□ -1.72
CLK1-213ENST00000492793 SUPT20HL1Q3ZLR7 823 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 MEX3CQ5U5Q3 659 aaKnown RBP4.29□□□□□ -1.72
CLK1-213ENST00000492793 HMBOX1Q6NT76 420 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 AADACL2Q6P093 401 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 SLC2A7Q6PXP3 512 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 IGFN1Q86VF2 1251 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 ZNF366Q8N895 744 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 PPHLN1Q8NEY8 458 aaKnown RBP4.29□□□□□ -1.72
CLK1-213ENST00000492793 TNIP2Q8NFZ5 429 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 UCMAQ8WVF2 138 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 HSPH1Q92598 858 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 KAT2AQ92830 837 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 ZBTB10Q96DT7 871 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 EYA3Q99504 573 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.29□□□□□ -1.72
CLK1-213ENST00000492793 PHF7Q9BWX1 381 aaPredicted RBP4.29□□□□□ -1.72
CLK1-213ENST00000492793 ZNF304Q9HCX3 659 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 IL1RAPL1Q9NZN1 696 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 CDH22Q9UJ99 828 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 CAMK2AQ9UQM7 478 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 LAMP3Q9UQV4 416 aa4.29□□□□□ -1.72
CLK1-213ENST00000492793 ADAM10O14672 748 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 SPTLC2O15270 562 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 TP73O15350 636 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 CEP104O60308 925 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 RBMXL2O75526 392 aaKnown RBP4.28□□□□□ -1.72
CLK1-213ENST00000492793 NR1H2P55055 460 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 CASP6P55212 293 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 NHLH1Q02575 133 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 GAD2Q05329 585 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 CAMK1Q14012 370 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 EDRF1Q3B7T1 1238 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 KIAA1755Q5JYT7 1200 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 UBAP2Q5T6F2 1119 aaKnown RBP4.28□□□□□ -1.72
CLK1-213ENST00000492793 NAA35Q5VZE5 725 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 NAPEPLDQ6IQ20 393 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 ACAD10Q6JQN1 1059 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 MON1AQ86VX9 555 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 CHD1LQ86WJ1 897 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 DPP10Q8N608 796 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 EXD3Q8N9H8 876 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 PCYOX1LQ8NBM8 494 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 LSM14AQ8ND56 463 aaKnown RBP4.28□□□□□ -1.72
CLK1-213ENST00000492793 CMASQ8NFW8 434 aaPredicted RBP4.28□□□□□ -1.72
CLK1-213ENST00000492793 TBC1D22AQ8WUA7 517 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 SKA1Q96BD8 255 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 PIMREGQ9BSJ6 248 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 TUBB6Q9BUF5 446 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 KRTAP9-8Q9BYQ0 159 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 SEMA4CQ9C0C4 833 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 PDCL3Q9H2J4 239 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 HIPK3Q9H422 1215 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 SLITRK6Q9H5Y7 841 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 ENTPD7Q9NQZ7 604 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 PAPOLBQ9NRJ5 636 aaKnown RBP4.28□□□□□ -1.72
CLK1-213ENST00000492793 FLRT1Q9NZU1 646 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 ZNF69Q9UC07 566 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 ICKQ9UPZ9 632 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 CNPY2Q9Y2B0 182 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 TMEM98Q9Y2Y6 226 aa4.28□□□□□ -1.72
CLK1-213ENST00000492793 TARSL2A2RTX5 802 aaKnown RBP4.27□□□□□ -1.73
CLK1-213ENST00000492793 FAM90A7PA6NKC0 464 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 FAM90A22PA8MWA6 464 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 FAM90A12PA8MX19 464 aa4.27□□□□□ -1.73
CLK1-213ENST00000492793 FAM90A23PA8MXZ1 464 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms