RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 DRGXA6NNA5 263 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 OPHN1O60890 802 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 MOCS3O95396 460 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 GJB6O95452 261 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 SYPP08247 313 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 GNSP15586 552 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 MMP8P22894 467 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 CSNK1EP49674 416 aaKnown RBP13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 VASPP50552 380 aaPredicted RBP13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 PTP4A2Q12974 167 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 KCNT1Q5JUK3 1230 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 BRMS1LQ5PSV4 323 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 E4F1Q66K89 784 aaPredicted RBP13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 LAYNQ6UX15 382 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 PHLDB2Q86SQ0 1253 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 TC2NQ8N9U0 490 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 SLC30A5Q8TAD4 765 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 CCDC42Q96M95 316 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 CFAP57Q96MR6 1250 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 PSMB7Q99436 277 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 BTBD1Q9H0C5 482 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 NEUROG2Q9H2A3 272 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 WDCPQ9H6R7 721 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 EBF2Q9HAK2 575 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 FBXL12Q9NXK8 326 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 ANGPTL2Q9UKU9 493 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 SARDHQ9UL12 918 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 CFAP47Q6ZTR5 3102 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 IGLV3-10A0A075B6K4 115 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 A0A1B0GVT2 93 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 A0A1W2PP55 124 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 PLK4O00444 970 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 NRDCO43847 1150 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 ATP9BO43861 1147 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 CLDN11O75508 207 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 ENDOD1O94919 500 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 MT-CO1P00395 513 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 F9P00740 461 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 UNGP13051 313 aaPredicted RBP13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 SPINK2P20155 84 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 HNRNPH3P31942 346 aaKnown RBP13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 SLC8A1P32418 973 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 EIF4A3P38919 411 aaKnown RBP13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 NSFP46459 744 aaKnown RBP13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 PSMD8P48556 350 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 ATXN3P54252 364 aaPredicted RBP13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 GALCP54803 685 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 DEUP1Q05D60 604 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 ZNF177Q13360 481 aaPredicted RBP13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 KIF19Q2TAC6 998 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 TTC31Q49AM3 519 aaPredicted RBP13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 RNF219Q5W0B1 726 aaPredicted RBP13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 ARCQ7LC44 396 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 ZNF571Q7Z3V5 609 aaPredicted RBP13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 JOSD2Q8TAC2 188 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 FAM131CQ96AQ9 280 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 C1orf74Q96LT6 269 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 PANX2Q96RD6 677 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 MAGEB5Q9BZ81 275 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 SGK2Q9HBY8 427 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 TM9SF3Q9HD45 589 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 METTL5Q9NRN9 209 aaKnown RBP13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 MPP6Q9NZW5 540 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 ADAMTS1Q9UHI8 967 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 STAP1Q9ULZ2 295 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 FNDC3AQ9Y2H6 1198 aaKnown RBP13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 PLXNA2O75051 1894 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 DOCK4Q8N1I0 1966 aa13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 DSPP15924 2871 aaKnown RBP13.03□□□□□ -0.32
SEC61A1-206ENST00000491668 A0A0D9SEW6 157 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 TMCO5BA8MYB1 307 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 K7ERQ8 282 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 RNF103O00237 685 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 WNT9AO14904 365 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 AKR1B10O60218 316 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 SH3BP5O60239 455 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 SNAP91O60641 907 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 FSBPO95073 299 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 PLEKP08567 350 aaPredicted RBP13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 CD27P26842 260 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 DRD3P35462 400 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 CDH4P55283 916 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 SULT2A1Q06520 285 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 MTA1Q13330 715 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 ELAVL3Q14576 367 aaKnown RBP13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 CLEC16AQ2KHT3 1053 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 HLA-BQ31612 363 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 CCDC14Q49A88 953 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 HGSNATQ68CP4 663 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 KIAA0895LQ68EN5 471 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 PPP1R2P3Q6NXS1 205 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 NCEH1Q6PIU2 408 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 FAM131BQ86XD5 332 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 HDDC3Q8N4P3 179 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 SNX19Q92543 992 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 C11orf70Q9BRQ4 267 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 ZDHHC5Q9C0B5 715 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 OSGEPQ9NPF4 335 aa13.02□□□□□ -0.33
SEC61A1-206ENST00000491668 ARHGAP20Q9P2F6 1191 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms