RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 EPHA5P54756 1037 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 NME3Q13232 169 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 ADAM15Q13444 863 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 MSS51Q4VC12 460 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 KCNT1Q5JUK3 1230 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 TXNDC8Q6A555 127 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 ADGRD1Q6QNK2 874 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 INPP5DQ92835 1189 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 UTP4Q969X6 686 aaKnown RBP23.32■■□□□ 1.32
USF3-203ENST00000491165 PAFAH2Q99487 392 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 DHRS4Q9BTZ2 278 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 ACSS3Q9H6R3 686 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 C10orf88Q9H8K7 445 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 WDR6Q9NNW5 1121 aaKnown RBP23.32■■□□□ 1.32
USF3-203ENST00000491165 ANLNQ9NQW6 1124 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 TMPRSS4Q9NRS4 437 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 TRPM5Q9NZQ8 1165 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 DPP7Q9UHL4 492 aa23.32■■□□□ 1.32
USF3-203ENST00000491165 VCANP13611 3396 aa23.31■■□□□ 1.32
USF3-203ENST00000491165 PAPLNO95428 1278 aa23.31■■□□□ 1.32
USF3-203ENST00000491165 MIPP30301 263 aa23.31■■□□□ 1.32
USF3-203ENST00000491165 RPL22P35268 128 aaKnown RBP23.31■■□□□ 1.32
USF3-203ENST00000491165 SEPT7Q16181 437 aaKnown RBP23.31■■□□□ 1.32
USF3-203ENST00000491165 TAZQ16635 292 aa23.31■■□□□ 1.32
USF3-203ENST00000491165 C3orf62Q6ZUJ4 267 aa23.31■■□□□ 1.32
USF3-203ENST00000491165 OTOAQ7RTW8 1153 aa23.31■■□□□ 1.32
USF3-203ENST00000491165 ARHGAP18Q8N392 663 aa23.31■■□□□ 1.32
USF3-203ENST00000491165 PDZD8Q8NEN9 1154 aa23.31■■□□□ 1.32
USF3-203ENST00000491165 CYP2S1Q96SQ9 504 aa23.31■■□□□ 1.32
USF3-203ENST00000491165 MAGEB5Q9BZ81 275 aa23.31■■□□□ 1.32
USF3-203ENST00000491165 SMOC2Q9H3U7 446 aa23.31■■□□□ 1.32
USF3-203ENST00000491165 PCSK1NQ9UHG2 260 aa23.31■■□□□ 1.32
USF3-203ENST00000491165 STAP1Q9ULZ2 295 aa23.31■■□□□ 1.32
USF3-203ENST00000491165 E7ESA3 106 aa23.3■■□□□ 1.32
USF3-203ENST00000491165 SMAPO00193 183 aa23.3■■□□□ 1.32
USF3-203ENST00000491165 COCHO43405 550 aa23.3■■□□□ 1.32
USF3-203ENST00000491165 PTPN2P17706 415 aa23.3■■□□□ 1.32
USF3-203ENST00000491165 EFEMP1Q12805 493 aa23.3■■□□□ 1.32
USF3-203ENST00000491165 CTC1Q2NKJ3 1217 aa23.3■■□□□ 1.32
USF3-203ENST00000491165 RARS2Q5T160 578 aaKnown RBP23.3■■□□□ 1.32
USF3-203ENST00000491165 FYB2Q5VWT5 728 aa23.3■■□□□ 1.32
USF3-203ENST00000491165 FAM131BQ86XD5 332 aa23.3■■□□□ 1.32
USF3-203ENST00000491165 FBXO36Q8NEA4 188 aa23.3■■□□□ 1.32
USF3-203ENST00000491165 SFXN1Q9H9B4 322 aa23.3■■□□□ 1.32
USF3-203ENST00000491165 DDIT4Q9NX09 232 aa23.3■■□□□ 1.32
USF3-203ENST00000491165 HAO1Q9UJM8 370 aa23.3■■□□□ 1.32
USF3-203ENST00000491165 ENDOD1O94919 500 aa23.3■■□□□ 1.32
USF3-203ENST00000491165 LTBRP36941 435 aa23.3■■□□□ 1.32
USF3-203ENST00000491165 SPDYAQ5MJ70 313 aa23.3■■□□□ 1.32
USF3-203ENST00000491165 C10orf120Q5SQS8 335 aa23.3■■□□□ 1.32
USF3-203ENST00000491165 MIB1Q86YT6 1006 aa23.3■■□□□ 1.32
USF3-203ENST00000491165 SHKBP1Q8TBC3 707 aa23.3■■□□□ 1.32
USF3-203ENST00000491165 SMG7Q92540 1137 aaKnown RBP23.3■■□□□ 1.32
USF3-203ENST00000491165 TMEM237Q96Q45 408 aa23.3■■□□□ 1.32
USF3-203ENST00000491165 ATXN3LQ9H3M9 355 aa23.3■■□□□ 1.32
USF3-203ENST00000491165 DIAPH2O60879 1101 aa23.29■■□□□ 1.32
USF3-203ENST00000491165 XYLBO75191 536 aa23.29■■□□□ 1.32
USF3-203ENST00000491165 ZXDBP98169 803 aa23.29■■□□□ 1.32
USF3-203ENST00000491165 PRSS36Q5K4E3 855 aa23.29■■□□□ 1.32
USF3-203ENST00000491165 ANKRD54Q6NXT1 300 aa23.29■■□□□ 1.32
USF3-203ENST00000491165 MSANTD2Q6P1R3 559 aa23.29■■□□□ 1.32
USF3-203ENST00000491165 STRADAQ7RTN6 431 aa23.29■■□□□ 1.32
USF3-203ENST00000491165 PALM2Q8IXS6 379 aa23.29■■□□□ 1.32
USF3-203ENST00000491165 PDIK1LQ8N165 341 aa23.29■■□□□ 1.32
USF3-203ENST00000491165 CCDC185Q8N715 623 aa23.29■■□□□ 1.32
USF3-203ENST00000491165 RNF139Q8WU17 664 aa23.29■■□□□ 1.32
USF3-203ENST00000491165 PGAP3Q96FM1 320 aaPredicted RBP23.29■■□□□ 1.32
USF3-203ENST00000491165 WDR83Q9BRX9 315 aaKnown RBP23.29■■□□□ 1.32
USF3-203ENST00000491165 TM9SF1O15321 606 aa23.29■■□□□ 1.32
USF3-203ENST00000491165 IRAK2O43187 625 aa23.29■■□□□ 1.32
USF3-203ENST00000491165 RASSF2P50749 326 aa23.29■■□□□ 1.32
USF3-203ENST00000491165 PABPC1LQ4VXU2 614 aaKnown RBP23.29■■□□□ 1.32
USF3-203ENST00000491165 MYLIPQ8WY64 445 aa23.29■■□□□ 1.32
USF3-203ENST00000491165 ALKBH8Q96BT7 664 aaKnown RBP23.29■■□□□ 1.32
USF3-203ENST00000491165 CLDND1Q9NY35 253 aa23.29■■□□□ 1.32
USF3-203ENST00000491165 USP18Q9UMW8 372 aa23.29■■□□□ 1.32
USF3-203ENST00000491165 RNF8O76064 485 aa23.28■■□□□ 1.32
USF3-203ENST00000491165 TSHRP16473 764 aa23.28■■□□□ 1.32
USF3-203ENST00000491165 ADRA1DP25100 572 aa23.28■■□□□ 1.32
USF3-203ENST00000491165 DEUP1Q05D60 604 aa23.28■■□□□ 1.32
USF3-203ENST00000491165 ACAP1Q15027 740 aa23.28■■□□□ 1.32
USF3-203ENST00000491165 SLC45A4Q5BKX6 768 aa23.28■■□□□ 1.32
USF3-203ENST00000491165 HECTD3Q5T447 861 aa23.28■■□□□ 1.32
USF3-203ENST00000491165 SCYL2Q6P3W7 929 aa23.28■■□□□ 1.32
USF3-203ENST00000491165 PDZD4Q76G19 769 aaPredicted RBP23.28■■□□□ 1.32
USF3-203ENST00000491165 RFX6Q8HWS3 928 aa23.28■■□□□ 1.32
USF3-203ENST00000491165 MAB21L3Q8N8X9 362 aa23.28■■□□□ 1.32
USF3-203ENST00000491165 KCTD6Q8NC69 237 aa23.28■■□□□ 1.32
USF3-203ENST00000491165 ZNF398Q8TD17 642 aa23.28■■□□□ 1.32
USF3-203ENST00000491165 MZB1Q8WU39 189 aa23.28■■□□□ 1.32
USF3-203ENST00000491165 TRPC7Q9HCX4 862 aa23.28■■□□□ 1.32
USF3-203ENST00000491165 XPO7Q9UIA9 1087 aaKnown RBP23.28■■□□□ 1.32
USF3-203ENST00000491165 TMEM63AO94886 807 aa23.27■■□□□ 1.32
USF3-203ENST00000491165 CD48P09326 243 aa23.27■■□□□ 1.32
USF3-203ENST00000491165 BBS9Q3SYG4 887 aa23.27■■□□□ 1.32
USF3-203ENST00000491165 HABP4Q5JVS0 413 aaKnown RBP23.27■■□□□ 1.32
USF3-203ENST00000491165 UNC45BQ8IWX7 931 aa23.27■■□□□ 1.32
USF3-203ENST00000491165 CMASQ8NFW8 434 aaPredicted RBP23.27■■□□□ 1.32
USF3-203ENST00000491165 DCAKDQ8WVC6 231 aa23.27■■□□□ 1.32
USF3-203ENST00000491165 TRIM62Q9BVG3 475 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms