RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 RHOBTB1O94844 696 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 VAPBO95292 243 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 RHOQP17081 205 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 PPIDQ08752 370 aaKnown RBP7.48□□□□□ -1.21
NPHP3-208ENST00000490993 WASHC5Q12768 1159 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 USP41Q3LFD5 358 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 TMEM63BQ5T3F8 832 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 LRRC8DQ7L1W4 858 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 TFAP2DQ7Z6R9 452 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 LGI2Q8N0V4 545 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 PYROXD2Q8N2H3 581 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 PQLC3Q8N755 202 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 TDRD5Q8NAT2 981 aaKnown RBP7.48□□□□□ -1.21
NPHP3-208ENST00000490993 KAT2BQ92831 832 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 FGD4Q96M96 766 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 PPP1R10Q96QC0 940 aaKnown RBP7.48□□□□□ -1.21
NPHP3-208ENST00000490993 MYH10P35580 1976 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 E7ESA3 106 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 TULP2O00295 520 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 CSH1P0DML2 217 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 CSH2P0DML3 217 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 ELNP15502 786 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 PTPN3P26045 913 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 RGS4P49798 205 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 ACLYP53396 1101 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 ABCE1P61221 599 aaKnown RBP7.48□□□□□ -1.21
NPHP3-208ENST00000490993 ARHGAP15Q53QZ3 475 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 HECTD3Q5T447 861 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 OTOAQ7RTW8 1153 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 TAC4Q86UU9 113 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 NDRG1Q92597 394 aaKnown RBP7.48□□□□□ -1.21
NPHP3-208ENST00000490993 C7orf26Q96N11 449 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 DRC3Q9H069 523 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 MTIF3Q9H2K0 278 aaKnown RBP7.48□□□□□ -1.21
NPHP3-208ENST00000490993 GPAMQ9HCL2 828 aa7.48□□□□□ -1.21
NPHP3-208ENST00000490993 A0A1W2PQH9 124 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 SYCE1LA8MT33 242 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 VPS26AO75436 327 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 CLCN5P51795 746 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 NDST2P52849 883 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 TPD52P55327 224 aaPredicted RBP7.47□□□□□ -1.21
NPHP3-208ENST00000490993 NAA20P61599 178 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 PARP15Q460N3 678 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 PABPC1LQ4VXU2 614 aaKnown RBP7.47□□□□□ -1.21
NPHP3-208ENST00000490993 CES3Q6UWW8 571 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 PIWIL2Q8TC59 973 aaKnown RBP7.47□□□□□ -1.21
NPHP3-208ENST00000490993 ASB2Q96Q27 587 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 SLC2A13Q96QE2 648 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 LPIN3Q9BQK8 851 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 NUF2Q9BZD4 464 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 GPR63Q9BZJ6 419 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 SENP6Q9GZR1 1112 aaPredicted RBP7.47□□□□□ -1.21
NPHP3-208ENST00000490993 DCLRE1BQ9H816 532 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 CYP4F11Q9HBI6 524 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 TMEM161AQ9NX61 479 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 UBA2Q9UBT2 640 aaPredicted RBP7.47□□□□□ -1.21
NPHP3-208ENST00000490993 E2F8A0AVK6 867 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 MATN3O15232 486 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 PQBP1O60828 265 aaKnown RBP7.47□□□□□ -1.21
NPHP3-208ENST00000490993 USP12O75317 370 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 LRIG2O94898 1065 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 BPGMP07738 259 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 FGFR1P11362 822 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 COL6A2P12110 1019 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 AVPR1AP37288 418 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 ELF3P78545 371 aaPredicted RBP7.47□□□□□ -1.21
NPHP3-208ENST00000490993 SLC1A5Q15758 541 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 NEPROQ6NW34 567 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 AGR3Q8TD06 166 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 DCAKDQ8WVC6 231 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 ZNF317Q96PQ6 595 aaPredicted RBP7.47□□□□□ -1.21
NPHP3-208ENST00000490993 TTPALQ9BTX7 342 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 THTPAQ9BU02 230 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 ADAM7Q9H2U9 754 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 PRDM5Q9NQX1 630 aaPredicted RBP7.47□□□□□ -1.21
NPHP3-208ENST00000490993 TEX264Q9Y6I9 313 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 MYH9P35579 1960 aaKnown RBP7.47□□□□□ -1.21
NPHP3-208ENST00000490993 FAM95CA0A1B0GW59 222 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 HAS3O00219 553 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 SRP72O76094 671 aaKnown RBP7.47□□□□□ -1.21
NPHP3-208ENST00000490993 TWF1Q12792 350 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 STX5Q13190 355 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 MSLNQ13421 630 aaPredicted RBP7.47□□□□□ -1.21
NPHP3-208ENST00000490993 ITGA9Q13797 1035 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 ZBTB6Q15916 424 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 RBBP7Q16576 425 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 ZNF470Q6ECI4 717 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 PKN3Q6P5Z2 889 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 RPAINQ86UA6 219 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 CYP4X1Q8N118 509 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 DCLK2Q8N568 766 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 PIH1D1Q9NWS0 290 aaKnown RBP7.47□□□□□ -1.21
NPHP3-208ENST00000490993 PCDHB12Q9Y5F1 795 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 TLL2Q9Y6L7 1015 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 SSC5DA1L4H1 1573 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 SIPA1L1O43166 1804 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 E9PAM4 449 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 KIF3CO14782 793 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 TPBGLP0DKB5 382 aa7.47□□□□□ -1.21
NPHP3-208ENST00000490993 SERPINB3P29508 390 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms