RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 SLC39A8Q9C0K1 460 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 ETNK2Q9NVF9 386 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 DTLQ9NZJ0 730 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 PLA2G4CQ9UP65 541 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 NEU3Q9UQ49 428 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 ZNF148Q9UQR1 794 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 SLC27A6Q9Y2P4 619 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 MRFAP1Q9Y605 127 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 REV3LO60673 3130 aa11.2□□□□□ -0.62
VARS2-210ENST00000490699 SZT2Q5T011 3432 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 CXorf51AA0A1B0GTR3 108 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 SGK1O00141 431 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 ARNTLO00327 626 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 KDELR3O43731 214 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 PHF2O75151 1096 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 KAT7O95251 611 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 BMP1P13497 986 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 PECAM1P16284 738 aaPredicted RBP11.19□□□□□ -0.62
VARS2-210ENST00000490699 DRD1P21728 446 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 CCNCP24863 283 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 HLA-FP30511 346 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 CTHP32929 405 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 CD70P32970 193 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 TNNT3P45378 269 aaPredicted RBP11.19□□□□□ -0.62
VARS2-210ENST00000490699 FNTAP49354 379 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 RENBPP51606 427 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 PLK1P53350 603 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 PRKCQQ04759 706 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 IL10RBQ08334 325 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 SERINC3Q13530 473 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 ZNF235Q14590 738 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 RFTN1Q14699 578 aaPredicted RBP11.19□□□□□ -0.62
VARS2-210ENST00000490699 MLF2Q15773 248 aaPredicted RBP11.19□□□□□ -0.62
VARS2-210ENST00000490699 SLC45A4Q5BKX6 768 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 PITRM1Q5JRX3 1037 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 RNF43Q68DV7 783 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 SDE2Q6IQ49 451 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 NPNTQ6UXI9 565 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 ZNF852Q6ZMS4 543 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 TRMT11Q7Z4G4 463 aaKnown RBP11.19□□□□□ -0.62
VARS2-210ENST00000490699 RNF135Q8IUD6 432 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.19□□□□□ -0.62
VARS2-210ENST00000490699 ETFBKMTQ8IXQ9 262 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 CCDC13Q8IYE1 715 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 CCDC105Q8IYK2 499 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.19□□□□□ -0.62
VARS2-210ENST00000490699 TERB1Q8NA31 727 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 OR7D4Q8NG98 312 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 ZNF599Q96NL3 588 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 QKIQ96PU8 341 aaKnown RBP eCLIP11.19□□□□□ -0.62
VARS2-210ENST00000490699 VAT1Q99536 393 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 AP1M1Q9BXS5 423 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 LRRC19Q9H756 370 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 HEBP1Q9NRV9 189 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 SEPT10Q9P0V9 454 aa11.19□□□□□ -0.62
VARS2-210ENST00000490699 UBA2Q9UBT2 640 aaPredicted RBP11.19□□□□□ -0.62
VARS2-210ENST00000490699 IPO11Q9UI26 975 aaKnown RBP11.19□□□□□ -0.62
VARS2-210ENST00000490699 A0A0D9SEW6 157 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 GOLGA6CA6NDK9 693 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 GOLGA6BA6NDN3 693 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 NPC1O15118 1278 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 LIASO43766 372 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 MAP3K6O95382 1288 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 SRPRAP08240 638 aaKnown RBP11.18□□□□□ -0.62
VARS2-210ENST00000490699 GOLGA6DP0CG33 693 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 MZF1P28698 734 aaPredicted RBP11.18□□□□□ -0.62
VARS2-210ENST00000490699 STIP1P31948 543 aaKnown RBP11.18□□□□□ -0.62
VARS2-210ENST00000490699 HSPA9P38646 679 aaKnown RBP11.18□□□□□ -0.62
VARS2-210ENST00000490699 TNFRSF4P43489 277 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 RECQLP46063 649 aaPredicted RBP11.18□□□□□ -0.62
VARS2-210ENST00000490699 ECT2LQ008S8 904 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 PPIDQ08752 370 aaKnown RBP11.18□□□□□ -0.62
VARS2-210ENST00000490699 SNX1Q13596 522 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 LRRC32Q14392 662 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 FBXO43Q4G163 708 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 SLC44A4Q53GD3 710 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 FSCBQ5H9T9 825 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 MARC1Q5VT66 337 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 AFMIDQ63HM1 303 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 MBLAC2Q68D91 279 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 ITPRIPL1Q6GPH6 555 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 DRICH1Q6PGQ1 229 aaPredicted RBP11.18□□□□□ -0.62
VARS2-210ENST00000490699 TPRG1Q6ZUI0 275 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 ARHGAP12Q8IWW6 846 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 ATP11CQ8NB49 1132 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 CCHCR1Q8TD31 782 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 C1orf54Q8WWF1 131 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 FAM3CQ92520 227 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 OLFM3Q96PB7 478 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 TSGA13Q96PP4 275 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 PPP1R2P1Q96PQ5 205 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 CINPQ9BW66 212 aaPredicted RBP11.18□□□□□ -0.62
VARS2-210ENST00000490699 ARHGEF3Q9NR81 526 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 NDFIP2Q9NV92 336 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 GOLGA6AQ9NYA3 693 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 SAE1Q9UBE0 346 aaPredicted RBP11.18□□□□□ -0.62
VARS2-210ENST00000490699 WNT16Q9UBV4 365 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 ZNF212Q9UDV6 495 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 SEPT3Q9UH03 358 aa11.18□□□□□ -0.62
VARS2-210ENST00000490699 FBXO10Q9UK96 956 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms