RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	SIPA1	Q96FS4	1042 aa		19.02	■□□□□ 0.64
C4A-256	ENST00000490663	KLC2	Q9H0B6	622 aa		19.02	■□□□□ 0.64
C4A-256	ENST00000490663	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	19.02	■□□□□ 0.64
C4A-256	ENST00000490663	TDRD6	O60522	2096 aa	Known RBP	19.01	■□□□□ 0.63
C4A-256	ENST00000490663	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	IGHV1OR15-9	A0A0B4J2B8	117 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	MYO1F	O00160	1098 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	ZBTB24	O43167	697 aa	Predicted RBP	19.01	■□□□□ 0.63
C4A-256	ENST00000490663	RARA	P10276	462 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	MAPKAPK2	P49137	400 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	AIF1	P55008	147 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	RPS14	P62263	151 aa	Known RBP	19.01	■□□□□ 0.63
C4A-256	ENST00000490663	ARF5	P84085	180 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	ATP13A4	Q4VNC1	1196 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	C9orf64	Q5T6V5	341 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	RAD9B	Q6WBX8	426 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	ZNF354C	Q86Y25	554 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	TMEFF1	Q8IYR6	380 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	SH2D3C	Q8N5H7	860 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	NIPA2	Q8N8Q9	360 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	RTL3	Q8N8U3	475 aa	Known RBP	19.01	■□□□□ 0.63
C4A-256	ENST00000490663	DCAF4L2	Q8NA75	395 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	SLC35G2	Q8TBE7	412 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	PTPRN2	Q92932	1015 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	ARHGEF2	Q92974	986 aa	Known RBP	19.01	■□□□□ 0.63
C4A-256	ENST00000490663	CELF6	Q96J87	481 aa	Known RBP	19.01	■□□□□ 0.63
C4A-256	ENST00000490663	SPACA7	Q96KW9	195 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	PANX2	Q96RD6	677 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	TNKS2	Q9H2K2	1166 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	SEMA4A	Q9H3S1	761 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	SMOC1	Q9H4F8	434 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	UVRAG	Q9P2Y5	699 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	SUN2	Q9UH99	717 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	HYOU1	Q9Y4L1	999 aa		19.01	■□□□□ 0.63
C4A-256	ENST00000490663	DMXL1	Q9Y485	3027 aa		19	■□□□□ 0.63
C4A-256	ENST00000490663	ATXN2	Q99700	1313 aa	Known RBP	19	■□□□□ 0.63
C4A-256	ENST00000490663	EDDM13	A0A1B0GTR0	161 aa		19	■□□□□ 0.63
C4A-256	ENST00000490663	ZMPSTE24	O75844	475 aa		19	■□□□□ 0.63
C4A-256	ENST00000490663	PROSC	O94903	275 aa		19	■□□□□ 0.63
C4A-256	ENST00000490663	CDC25B	P30305	580 aa		19	■□□□□ 0.63
C4A-256	ENST00000490663	PCK1	P35558	622 aa		19	■□□□□ 0.63
C4A-256	ENST00000490663	MAGEA1	P43355	309 aa		19	■□□□□ 0.63
C4A-256	ENST00000490663	PSMD8	P48556	350 aa		19	■□□□□ 0.63
C4A-256	ENST00000490663	METAP1	P53582	386 aa		19	■□□□□ 0.63
C4A-256	ENST00000490663	SULT2A1	Q06520	285 aa		19	■□□□□ 0.63
C4A-256	ENST00000490663	E2F5	Q15329	346 aa		19	■□□□□ 0.63
C4A-256	ENST00000490663	DLG2	Q15700	870 aa		19	■□□□□ 0.63
C4A-256	ENST00000490663	POM121L1P	Q3SYA9	428 aa		19	■□□□□ 0.63
C4A-256	ENST00000490663	MMAA	Q8IVH4	418 aa	Known RBP	19	■□□□□ 0.63
C4A-256	ENST00000490663	ATP11C	Q8NB49	1132 aa		19	■□□□□ 0.63
C4A-256	ENST00000490663	FRS2	Q8WU20	508 aa		19	■□□□□ 0.63
C4A-256	ENST00000490663	PRCC	Q92733	491 aa	Predicted RBP	19	■□□□□ 0.63
C4A-256	ENST00000490663	HMCES	Q96FZ2	354 aa		19	■□□□□ 0.63
C4A-256	ENST00000490663	ANP32E	Q9BTT0	268 aa		19	■□□□□ 0.63
C4A-256	ENST00000490663	C2orf49	Q9BVC5	232 aa	Predicted RBP	19	■□□□□ 0.63
C4A-256	ENST00000490663	CWC15	Q9P013	229 aa	Known RBP	19	■□□□□ 0.63
C4A-256	ENST00000490663	CFAP54	Q96N23	3096 aa		18.99	■□□□□ 0.63
C4A-256	ENST00000490663	PCDH15	Q96QU1	1955 aa		18.99	■□□□□ 0.63
C4A-256	ENST00000490663	PLK4	O00444	970 aa		18.99	■□□□□ 0.63
C4A-256	ENST00000490663	MAP3K13	O43283	966 aa		18.99	■□□□□ 0.63
C4A-256	ENST00000490663	RAMP2	O60895	175 aa		18.99	■□□□□ 0.63
C4A-256	ENST00000490663	CD48	P09326	243 aa		18.99	■□□□□ 0.63
C4A-256	ENST00000490663	NNMT	P40261	264 aa		18.99	■□□□□ 0.63
C4A-256	ENST00000490663	DHPS	P49366	369 aa	Predicted RBP	18.99	■□□□□ 0.63
C4A-256	ENST00000490663	TPMT	P51580	245 aa		18.99	■□□□□ 0.63
C4A-256	ENST00000490663	KRT83	P78385	493 aa		18.99	■□□□□ 0.63
C4A-256	ENST00000490663	MMRN1	Q13201	1228 aa		18.99	■□□□□ 0.63
C4A-256	ENST00000490663	POLD3	Q15054	466 aa	Predicted RBP	18.99	■□□□□ 0.63
C4A-256	ENST00000490663	PMS2CL	Q68D20	193 aa		18.99	■□□□□ 0.63
C4A-256	ENST00000490663	LAIR1	Q6GTX8	287 aa		18.99	■□□□□ 0.63
C4A-256	ENST00000490663	RFX8	Q6ZV50	586 aa		18.99	■□□□□ 0.63
C4A-256	ENST00000490663	TP53INP2	Q8IXH6	220 aa		18.99	■□□□□ 0.63
C4A-256	ENST00000490663	ACRBP	Q8NEB7	543 aa		18.99	■□□□□ 0.63
C4A-256	ENST00000490663	GOLPH3	Q9H4A6	298 aa		18.99	■□□□□ 0.63
C4A-256	ENST00000490663	CATSPERB	Q9H7T0	1116 aa		18.99	■□□□□ 0.63
C4A-256	ENST00000490663	PARD6A	Q9NPB6	346 aa		18.99	■□□□□ 0.63
C4A-256	ENST00000490663	ETNK2	Q9NVF9	386 aa		18.99	■□□□□ 0.63
C4A-256	ENST00000490663	SERGEF	Q9UGK8	458 aa		18.99	■□□□□ 0.63
C4A-256	ENST00000490663	FCF1	Q9Y324	198 aa	Known RBP	18.99	■□□□□ 0.63
C4A-256	ENST00000490663	CACNA1E	Q15878	2313 aa		18.99	■□□□□ 0.63
C4A-256	ENST00000490663	RASA4B	C9J798	803 aa		18.98	■□□□□ 0.63
C4A-256	ENST00000490663	RNF103	O00237	685 aa		18.98	■□□□□ 0.63
C4A-256	ENST00000490663	MID1	O15344	667 aa		18.98	■□□□□ 0.63
C4A-256	ENST00000490663	DAPK3	O43293	454 aa		18.98	■□□□□ 0.63
C4A-256	ENST00000490663	RASA4	O43374	803 aa		18.98	■□□□□ 0.63
C4A-256	ENST00000490663	ATP9B	O43861	1147 aa		18.98	■□□□□ 0.63
C4A-256	ENST00000490663	ACADM	P11310	421 aa		18.98	■□□□□ 0.63
C4A-256	ENST00000490663	ERCC2	P18074	760 aa		18.98	■□□□□ 0.63
C4A-256	ENST00000490663	FECH	P22830	423 aa		18.98	■□□□□ 0.63
C4A-256	ENST00000490663	AMPD1	P23109	780 aa		18.98	■□□□□ 0.63
C4A-256	ENST00000490663	CYLC1	P35663	651 aa	Predicted RBP	18.98	■□□□□ 0.63
C4A-256	ENST00000490663	RPL6	Q02878	288 aa	Known RBP	18.98	■□□□□ 0.63
C4A-256	ENST00000490663	SPEM2	Q0P670	501 aa		18.98	■□□□□ 0.63
C4A-256	ENST00000490663	ACAP1	Q15027	740 aa		18.98	■□□□□ 0.63
C4A-256	ENST00000490663	ZNF776	Q68DI1	518 aa	Predicted RBP	18.98	■□□□□ 0.63
C4A-256	ENST00000490663	C22orf39	Q6P5X5	142 aa		18.98	■□□□□ 0.63
C4A-256	ENST00000490663	TMEM139	Q8IV31	216 aa		18.98	■□□□□ 0.63
C4A-256	ENST00000490663	NPW	Q8N729	165 aa		18.98	■□□□□ 0.63
C4A-256	ENST00000490663	RFFL	Q8WZ73	363 aa		18.98	■□□□□ 0.63
C4A-256	ENST00000490663	PPP1R9B	Q96SB3	815 aa		18.98	■□□□□ 0.63

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms