RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 RETSATQ6NUM9 610 aa13.54□□□□□ -0.24
SNX12-205ENST00000490561 C4orf22Q6V702 233 aa13.54□□□□□ -0.24
SNX12-205ENST00000490561 KIAA0907Q7Z7F0 614 aaPredicted RBP13.54□□□□□ -0.24
SNX12-205ENST00000490561 ZC3H18Q86VM9 953 aaKnown RBP13.54□□□□□ -0.24
SNX12-205ENST00000490561 RALGPS2Q86X27 583 aaPredicted RBP13.54□□□□□ -0.24
SNX12-205ENST00000490561 MMGT1Q8N4V1 131 aa13.54□□□□□ -0.24
SNX12-205ENST00000490561 CCHCR1Q8TD31 782 aa13.54□□□□□ -0.24
SNX12-205ENST00000490561 HTR3CQ8WXA8 447 aa13.54□□□□□ -0.24
SNX12-205ENST00000490561 ATG4AQ8WYN0 398 aa13.54□□□□□ -0.24
SNX12-205ENST00000490561 LMLNQ96KR4 655 aa13.54□□□□□ -0.24
SNX12-205ENST00000490561 CCDC114Q96M63 670 aa13.54□□□□□ -0.24
SNX12-205ENST00000490561 SPON2Q9BUD6 331 aa13.54□□□□□ -0.24
SNX12-205ENST00000490561 ABCB8Q9NUT2 735 aa13.54□□□□□ -0.24
SNX12-205ENST00000490561 AMACRQ9UHK6 382 aa13.54□□□□□ -0.24
SNX12-205ENST00000490561 OR51B4Q9Y5P0 310 aa13.54□□□□□ -0.24
SNX12-205ENST00000490561 A0A0D9SEW6 157 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 C19orf67A6NJJ6 358 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 MATN3O15232 486 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 MAFKO60675 156 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 TULP3O75386 442 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 NEBLO76041 1014 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 ECEL1O95672 775 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 CISD3P0C7P0 127 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 HLA-FP30511 346 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 CD70P32970 193 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 C2orf54Q08AI8 447 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 SNX1Q13596 522 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 HNRNPDQ14103 355 aaKnown RBP13.53□□□□□ -0.24
SNX12-205ENST00000490561 GAB4Q2WGN9 574 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 FSCBQ5H9T9 825 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 PITRM1Q5JRX3 1037 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 GSTA5Q7RTV2 222 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 KLHL7Q8IXQ5 586 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 ALLCQ8N6M5 410 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 NAT16Q8N8M0 369 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 CCDC89Q8N998 374 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 ST13P5Q8NFI4 369 aaPredicted RBP13.53□□□□□ -0.24
SNX12-205ENST00000490561 OR7D4Q8NG98 312 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 WFDC5Q8TCV5 224 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 UCMAQ8WVF2 138 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 RTP4Q96DX8 246 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 ALG14Q96F25 216 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 PNKPQ96T60 521 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 KRT12Q99456 494 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 DDX47Q9H0S4 455 aaKnown RBP13.53□□□□□ -0.24
SNX12-205ENST00000490561 GTSE1Q9NYZ3 720 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 SLC25A13Q9UJS0 675 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 TRHDEQ9UKU6 1024 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 DUSP12Q9UNI6 340 aa13.53□□□□□ -0.24
SNX12-205ENST00000490561 FAM187AA6NFU0 413 aa13.52□□□□□ -0.25
SNX12-205ENST00000490561 SGK1O00141 431 aa13.52□□□□□ -0.25
SNX12-205ENST00000490561 NDC80O14777 642 aa13.52□□□□□ -0.25
SNX12-205ENST00000490561 KCNN4O15554 427 aa13.52□□□□□ -0.25
SNX12-205ENST00000490561 MAP3K6O95382 1288 aa13.52□□□□□ -0.25
SNX12-205ENST00000490561 APODP05090 189 aa13.52□□□□□ -0.25
SNX12-205ENST00000490561 ATP5BP06576 529 aaKnown RBP13.52□□□□□ -0.25
SNX12-205ENST00000490561 ASGR2P07307 311 aa13.52□□□□□ -0.25
SNX12-205ENST00000490561 POLR2EP19388 210 aaKnown RBP13.52□□□□□ -0.25
SNX12-205ENST00000490561 MZF1P28698 734 aaPredicted RBP13.52□□□□□ -0.25
SNX12-205ENST00000490561 ACVRL1P37023 503 aa13.52□□□□□ -0.25
SNX12-205ENST00000490561 HSPA9P38646 679 aaKnown RBP13.52□□□□□ -0.25
SNX12-205ENST00000490561 GRIA2P42262 883 aa13.52□□□□□ -0.25
SNX12-205ENST00000490561 VASPP50552 380 aaPredicted RBP13.52□□□□□ -0.25
SNX12-205ENST00000490561 RENBPP51606 427 aa13.52□□□□□ -0.25
SNX12-205ENST00000490561 CLCN6P51797 869 aa13.52□□□□□ -0.25
SNX12-205ENST00000490561 IFI35P80217 286 aaPredicted RBP13.52□□□□□ -0.25
SNX12-205ENST00000490561 DR1Q01658 176 aa13.52□□□□□ -0.25
SNX12-205ENST00000490561 P3H1Q32P28 736 aa13.52□□□□□ -0.25
SNX12-205ENST00000490561 INO80DQ53TQ3 878 aaPredicted RBP13.52□□□□□ -0.25
SNX12-205ENST00000490561 C8orf74Q6P047 294 aa13.52□□□□□ -0.25
SNX12-205ENST00000490561 MAML1Q92585 1016 aa13.52□□□□□ -0.25
SNX12-205ENST00000490561 TTC17Q96AE7 1141 aa13.52□□□□□ -0.25
SNX12-205ENST00000490561 P2RY11Q96G91 374 aa13.52□□□□□ -0.25
SNX12-205ENST00000490561 PPP1R2P1Q96PQ5 205 aa13.52□□□□□ -0.25
SNX12-205ENST00000490561 LGMNQ99538 433 aa13.52□□□□□ -0.25
SNX12-205ENST00000490561 FAM118BQ9BPY3 351 aa13.52□□□□□ -0.25
SNX12-205ENST00000490561 UBA2Q9UBT2 640 aaPredicted RBP13.52□□□□□ -0.25
SNX12-205ENST00000490561 CLEC4EQ9ULY5 219 aa13.52□□□□□ -0.25
SNX12-205ENST00000490561 SORCS3Q9UPU3 1222 aa13.52□□□□□ -0.25
SNX12-205ENST00000490561 SZT2Q5T011 3432 aa13.51□□□□□ -0.25
SNX12-205ENST00000490561 C5orf60A6NFR6 353 aa13.51□□□□□ -0.25
SNX12-205ENST00000490561 OTOL1A6NHN0 477 aaPredicted RBP13.51□□□□□ -0.25
SNX12-205ENST00000490561 SPECC1L-ADORA2AF8WAN1 911 aa13.51□□□□□ -0.25
SNX12-205ENST00000490561 CBX4O00257 560 aa13.51□□□□□ -0.25
SNX12-205ENST00000490561 NPC1O15118 1278 aa13.51□□□□□ -0.25
SNX12-205ENST00000490561 OPHN1O60890 802 aa13.51□□□□□ -0.25
SNX12-205ENST00000490561 ZMPSTE24O75844 475 aa13.51□□□□□ -0.25
SNX12-205ENST00000490561 SRPRAP08240 638 aaKnown RBP13.51□□□□□ -0.25
SNX12-205ENST00000490561 CCNB1P14635 433 aa13.51□□□□□ -0.25
SNX12-205ENST00000490561 RBL1P28749 1068 aa13.51□□□□□ -0.25
SNX12-205ENST00000490561 NNMTP40261 264 aa13.51□□□□□ -0.25
SNX12-205ENST00000490561 OPRD1P41143 372 aa13.51□□□□□ -0.25
SNX12-205ENST00000490561 PPP1R7Q15435 360 aa13.51□□□□□ -0.25
SNX12-205ENST00000490561 FUT11Q495W5 492 aa13.51□□□□□ -0.25
SNX12-205ENST00000490561 MARC1Q5VT66 337 aa13.51□□□□□ -0.25
SNX12-205ENST00000490561 MBLAC2Q68D91 279 aa13.51□□□□□ -0.25
SNX12-205ENST00000490561 ITPRIPL1Q6GPH6 555 aa13.51□□□□□ -0.25
SNX12-205ENST00000490561 TTC27Q6P3X3 843 aa13.51□□□□□ -0.25
SNX12-205ENST00000490561 TP53INP2Q8IXH6 220 aa13.51□□□□□ -0.25
SNX12-205ENST00000490561 TERB1Q8NA31 727 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms