RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 GDF3Q9NR23 364 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 DKK4Q9UBT3 224 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 STAP1Q9ULZ2 295 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 DMTF1Q9Y222 760 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 PCDHGA1Q9Y5H4 931 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 CACNA1GO43497 2377 aa10.66□□□□□ -0.7
TTC28-207ENST00000490475 COL5A1P20908 1838 aaPredicted RBP10.65□□□□□ -0.7
TTC28-207ENST00000490475 PTPRBP23467 1997 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 A0A1B0GTQ1 180 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 FAM47DPA6NHR8 397 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 LRRC53A6NM62 1247 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 DKK1O94907 266 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 IL1BP01584 269 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 IGHV4-34P06331 123 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 MZF1P28698 734 aaPredicted RBP10.65□□□□□ -0.7
TTC28-207ENST00000490475 CDH5P33151 784 aaPredicted RBP10.65□□□□□ -0.7
TTC28-207ENST00000490475 SCNN1AP37088 669 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 PBX1P40424 430 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 KRT83P78385 493 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 SLC6A3Q01959 620 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 SCAPQ12770 1279 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 FSCBQ5H9T9 825 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 NAA35Q5VZE5 725 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 FAM183BPQ6ZVS7 135 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 PHLDB2Q86SQ0 1253 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 PRPF39Q86UA1 669 aaKnown RBP10.65□□□□□ -0.7
TTC28-207ENST00000490475 ERICH1Q86X53 443 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 ZNF677Q86XU0 584 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 DEFB106AQ8N104 65 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 ZNF397Q8NF99 534 aaPredicted RBP10.65□□□□□ -0.7
TTC28-207ENST00000490475 OR14C36Q8NHC7 312 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 SLC30A5Q8TAD4 765 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 CPLX3Q8WVH0 158 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 PTPRN2Q92932 1015 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 PRMT1Q99873 361 aaKnown RBP10.65□□□□□ -0.7
TTC28-207ENST00000490475 AGPAT1Q99943 283 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 XPO4Q9C0E2 1151 aaKnown RBP10.65□□□□□ -0.7
TTC28-207ENST00000490475 ERVMER34-1Q9H9K5 563 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 AASDHPPTQ9NRN7 309 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 FTSJ1Q9UET6 329 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 TMEM131Q92545 1883 aa10.65□□□□□ -0.7
TTC28-207ENST00000490475 NYNRINQ9P2P1 1898 aaKnown RBP10.65□□□□□ -0.7
TTC28-207ENST00000490475 ZZEF1O43149 2961 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 TBC1D3DA0A087WVF3 549 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 TBC1D3IA0A087WXS9 549 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 TBC1D3EA0A087X179 549 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 TBC1D3KA0A087X1G2 549 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 TBC1D3FA6NER0 549 aaPredicted RBP10.64□□□□□ -0.71
TTC28-207ENST00000490475 TTC34A8MYJ7 566 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 TBC1D3LB9A6J9 549 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 H0Y8X5 98 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 LATO43561 262 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 ATP9BO43861 1147 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 RNGTTO60942 597 aaKnown RBP10.64□□□□□ -0.71
TTC28-207ENST00000490475 DAB1O75553 588 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 LSM8O95777 96 aaKnown RBP10.64□□□□□ -0.71
TTC28-207ENST00000490475 CYP1A1P04798 512 aaPredicted RBP10.64□□□□□ -0.71
TTC28-207ENST00000490475 ITGAVP06756 1048 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 TBC1D3HP0C7X1 549 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 PDGFRAP16234 1089 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 FERP16591 822 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 HNF1BP35680 557 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 GABRB2P47870 512 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 PSMD8P48556 350 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 CLCN6P51797 869 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 ADPRHP54922 357 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 CDH4P55283 916 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 RNASE9P60153 205 aaKnown RBP10.64□□□□□ -0.71
TTC28-207ENST00000490475 NOMO3P69849 1222 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 PITX1P78337 314 aaPredicted RBP10.64□□□□□ -0.71
TTC28-207ENST00000490475 TBC1D3GQ6DHY5 549 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 TBC1D3CQ6IPX1 549 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 NAPEPLDQ6IQ20 393 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 FBXL22Q6P050 247 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 NEK5Q6P3R8 708 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 OLFML1Q6UWY5 402 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 LRRC31Q6UY01 552 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 SETD3Q86TU7 594 aaPredicted RBP10.64□□□□□ -0.71
TTC28-207ENST00000490475 SLCO6A1Q86UG4 719 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 TMPRSS12Q86WS5 348 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 TBC1D3Q8IZP1 549 aaPredicted RBP10.64□□□□□ -0.71
TTC28-207ENST00000490475 APCDD1Q8J025 514 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 STK40Q8N2I9 435 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 PNPLA1Q8N8W4 532 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 MFSD2AQ8NA29 543 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 FAM174AQ8TBP5 190 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 C18orf8Q96DM3 657 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 PGAP3Q96FM1 320 aaPredicted RBP10.64□□□□□ -0.71
TTC28-207ENST00000490475 SERAC1Q96JX3 654 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 RPL10LQ96L21 214 aaKnown RBP10.64□□□□□ -0.71
TTC28-207ENST00000490475 FAM129BQ96TA1 746 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 C2orf49Q9BVC5 232 aaPredicted RBP10.64□□□□□ -0.71
TTC28-207ENST00000490475 TTYH3Q9C0H2 523 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 WDCPQ9H6R7 721 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 RRAGDQ9NQL2 400 aaPredicted RBP10.64□□□□□ -0.71
TTC28-207ENST00000490475 SLCO3A1Q9UIG8 710 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 VPS28Q9UK41 221 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 TP53BP1Q12888 1972 aaPredicted RBP10.64□□□□□ -0.71
TTC28-207ENST00000490475 DMXL2Q8TDJ6 3036 aa10.64□□□□□ -0.71
TTC28-207ENST00000490475 ZFYVE26Q68DK2 2539 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms