RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 TRIM43Q96BQ3 446 aaPredicted RBP10.02□□□□□ -0.81
NOD1-208ENST00000489614 FBXL8Q96CD0 374 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 CPXM1Q96SM3 734 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 ZBED2Q9BTP6 218 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 ANLNQ9NQW6 1124 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 SAR1AQ9NR31 198 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 MARCH5Q9NX47 278 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 TJP2Q9UDY2 1190 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 SNX9Q9Y5X1 595 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 LAMA2P24043 3122 aaKnown RBP10.02□□□□□ -0.81
NOD1-208ENST00000489614 A8MXQ7 604 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 TTC34A8MYJ7 566 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 HHLA1C9JL84 531 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 TMX2-CTNND1H3BSU7 103 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 LINC00271P0C7V0 271 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 HSPA1AP0DMV8 641 aaKnown RBP10.02□□□□□ -0.81
NOD1-208ENST00000489614 HSPA1BP0DMV9 641 aaKnown RBP10.02□□□□□ -0.81
NOD1-208ENST00000489614 RARGP13631 454 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 TYMPP19971 482 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 ATP5DP30049 168 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 YWHAGP61981 247 aaKnown RBP eCLIP10.02□□□□□ -0.81
NOD1-208ENST00000489614 OGDHQ02218 1023 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 TLE2Q04725 743 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 TMED2Q15363 201 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 TIGD2Q4W5G0 525 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 TRNP1Q6NT89 227 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 LLGL2Q6P1M3 1020 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 LPCAT2Q7L5N7 544 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 CPNE8Q86YQ8 564 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 ALDH16A1Q8IZ83 802 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 ADGRF2Q8IZF7 708 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 SYCE1Q8N0S2 351 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 C4orf33Q8N1A6 199 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 DTX3Q8N9I9 347 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 DBF4BQ8NFT6 615 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 ZNF564Q8TBZ8 553 aaPredicted RBP10.02□□□□□ -0.81
NOD1-208ENST00000489614 OSCP1Q8WVF1 389 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 MTBPQ96DY7 904 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 PWWP2AQ96N64 755 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 CSNK1G1Q9HCP0 422 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 CRTAC1Q9NQ79 661 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 GIN1Q9NXP7 522 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 SCHIP1Q9P0W5 487 aaPredicted RBP10.02□□□□□ -0.81
NOD1-208ENST00000489614 ADAMTS6Q9UKP5 1117 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 NAALADL1Q9UQQ1 740 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 NOD1Q9Y239 953 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 LOC105371267A0A1B0GV96 52 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 ARHGAP42A6NI28 874 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 EDF1O60869 148 aaKnown RBP10.01□□□□□ -0.81
NOD1-208ENST00000489614 KCNJ1P48048 391 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 CSE1LP55060 971 aaKnown RBP10.01□□□□□ -0.81
NOD1-208ENST00000489614 C21orf59P57076 290 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 RAB41Q5JT25 222 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 DCLRE1AQ6PJP8 1040 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 XKR5Q6UX68 686 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 CCDC81Q6ZN84 652 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 CYP4V2Q6ZWL3 525 aaPredicted RBP10.01□□□□□ -0.81
NOD1-208ENST00000489614 BHLHA9Q7RTU4 235 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 ZNF280BQ86YH2 543 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 SCML4Q8N228 414 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 TTC30BQ8N4P2 665 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 SPERTQ8NA61 448 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 TMEM35BQ8NCS4 154 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 ICA1LQ8NDH6 482 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 CAPSLQ8WWF8 208 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 PTCD3Q96EY7 689 aaKnown RBP10.01□□□□□ -0.81
NOD1-208ENST00000489614 C2orf49Q9BVC5 232 aaPredicted RBP10.01□□□□□ -0.81
NOD1-208ENST00000489614 CLK4Q9HAZ1 481 aaKnown RBP10.01□□□□□ -0.81
NOD1-208ENST00000489614 TBC1D13Q9NVG8 400 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 RSL24D1Q9UHA3 163 aaKnown RBP10.01□□□□□ -0.81
NOD1-208ENST00000489614 GRID1Q9ULK0 1009 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 PCDHB8Q9UN66 801 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 CEPT1Q9Y6K0 416 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 FAM47DPA6NHR8 397 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 ZSCAN5BA6NJL1 495 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 DPYSL4O14531 572 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 PFDN6O15212 129 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 ITGB1P05556 798 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 CALB1P05937 261 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 ENO1P06733 434 aaKnown RBP10.01□□□□□ -0.81
NOD1-208ENST00000489614 THRAP10827 490 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 ENPP1P22413 925 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 PPARGP37231 505 aaPredicted RBP10.01□□□□□ -0.81
NOD1-208ENST00000489614 TUBA1BP68363 451 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 TAZQ16635 292 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 SGO2Q562F6 1265 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 NOMO2Q5JPE7 1267 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 FYB2Q5VWT5 728 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 NANOGP8Q6NSW7 305 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 CNKSR3Q6P9H4 555 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 TUBA1AQ71U36 451 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 TMC7Q7Z402 723 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 NPAS4Q8IUM7 802 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 ERI1Q8IV48 349 aaKnown RBP10.01□□□□□ -0.81
NOD1-208ENST00000489614 ESX1Q8N693 406 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 ARFGAP1Q8N6T3 406 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 C12orf29Q8N999 325 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 KCTD13Q8WZ19 329 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 SENP8Q96LD8 212 aa10.01□□□□□ -0.81
NOD1-208ENST00000489614 SERPINB12Q96P63 405 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms