RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, human

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD1L-208	ENST00000488864	CENPU	Q71F23	418 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	SCD5	Q86SK9	330 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	BANP	Q8N9N5	519 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	MCUR1	Q96AQ8	359 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	WDR83	Q9BRX9	315 aa	Known RBP	13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	TMEM121	Q9BTD3	319 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	TRIM55	Q9BYV6	548 aa		13.62	□□□□□ -0.23
CHD1L-208	ENST00000488864	RNF8	O76064	485 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	TJP3	O95049	919 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	GLUD1	P00367	558 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	IL1R2	P27930	398 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	MIP	P30301	263 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	CPA2	P48052	419 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	SULT1E1	P49888	294 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	NEK3	P51956	506 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	NME3	Q13232	169 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	TAF12	Q16514	161 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	ANKRD22	Q5VYY1	191 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	ADGRD2	Q7Z7M1	963 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	GPR65	Q8IYL9	337 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	TCEAL8	Q8IYN2	117 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	TAB3	Q8N5C8	712 aa	Predicted RBP	13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	KREMEN2	Q8NCW0	462 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	TIFA	Q96CG3	184 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	SPATA17	Q96L03	361 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	SAMD11	Q96NU1	681 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	TRIM4	Q9C037	500 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	FBXO44	Q9H4M3	255 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	SSU72	Q9NP77	194 aa	Known RBP	13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	ARHGEF4	Q9NR80	690 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	ASNSD1	Q9NWL6	643 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	STX18	Q9P2W9	335 aa	Known RBP	13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	DAB1	O75553	588 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	IFNB1	P01574	187 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	KRT1	P04264	644 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	UBTFL6	P0CB48	400 aa	Predicted RBP	13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	SCNN1A	P37088	669 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	CDK16	Q00536	496 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	ZBTB16	Q05516	673 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	RASA2	Q15283	850 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	BTBD8	Q5XKL5	378 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	LILRA6	Q6PI73	481 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	NIPA2	Q8N8Q9	360 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	FBXO27	Q8NI29	283 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	SLC2A13	Q96QE2	648 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	PAFAH2	Q99487	392 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	TSSK1B	Q9BXA7	367 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	PCMTD2	Q9NV79	361 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	ARMCX1	Q9P291	453 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	SCML2	Q9UQR0	700 aa		13.61	□□□□□ -0.23
CHD1L-208	ENST00000488864	ZNF638	Q14966	1978 aa	Known RBP	13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864		M0QYT0	321 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	DNAJC6	O75061	913 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	RFPL2	O75678	378 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	TBX18	O95935	607 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	C8A	P07357	584 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	ESRRA	P11474	423 aa	Predicted RBP	13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	EPCAM	P16422	314 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	NOS2	P35228	1153 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	CLCN4	P51793	760 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	HDAC4	P56524	1084 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	ARL4C	P56559	192 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	PLD1	Q13393	1074 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	OTUD1	Q5VV17	481 aa	Predicted RBP	13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	ADGRD1	Q6QNK2	874 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	FAM131B	Q86XD5	332 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	RCOR2	Q8IZ40	523 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	CFAP61	Q8NHU2	1237 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	SLC22A17	Q8WUG5	538 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	DCAKD	Q8WVC6	231 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	TRAPPC9	Q96Q05	1148 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	PEBP4	Q96S96	227 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	DHRS4	Q9BTZ2	278 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	SFMBT1	Q9UHJ3	866 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	FBXW11	Q9UKB1	542 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	USP18	Q9UMW8	372 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	PATJ	Q8NI35	1801 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	MAGEA13P	A6NCF6	341 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	SGK1	O00141	431 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	MDM4	O15151	490 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	MAP3K7	O43318	606 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	DLD	P09622	509 aa	Known RBP	13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	HMGA1	P17096	107 aa	Known RBP	13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	RGS19	P49795	217 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	OASL	Q15646	514 aa	Known RBP	13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	SLC25A52	Q3SY17	297 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	ZNF697	Q5TEC3	545 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	DRICH1	Q6PGQ1	229 aa	Predicted RBP	13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	C3orf62	Q6ZUJ4	267 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	MON1A	Q86VX9	555 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	PDCD7	Q8N8D1	485 aa	Known RBP	13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	IRGQ	Q8WZA9	623 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	STMN2	Q93045	179 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	ZNF512	Q96ME7	567 aa	Predicted RBP	13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	TUBB6	Q9BUF5	446 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	MAGEB5	Q9BZ81	275 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	VPS11	Q9H270	941 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	TMPRSS4	Q9NRS4	437 aa		13.6	□□□□□ -0.23
CHD1L-208	ENST00000488864	IL37	Q9NZH6	218 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms