RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 LINGO4Q6UY18 593 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 CDKL3Q8IVW4 592 aaPredicted RBP12.59□□□□□ -0.39
TRAIP-209ENST00000488860 UBALD2Q8IYN6 164 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 PHTF2Q8N3S3 785 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 CYB5D2Q8WUJ1 264 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 SORCS1Q8WY21 1168 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 FAM3CQ92520 227 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 HDAC11Q96DB2 347 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 LMLNQ96KR4 655 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 CCDC114Q96M63 670 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 OLFM3Q96PB7 478 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 QKIQ96PU8 341 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRAIP-209ENST00000488860 LGMNQ99538 433 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 C2orf49Q9BVC5 232 aaPredicted RBP12.59□□□□□ -0.39
TRAIP-209ENST00000488860 C10orf88Q9H8K7 445 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 SEPT10Q9P0V9 454 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 IPO11Q9UI26 975 aaKnown RBP12.59□□□□□ -0.39
TRAIP-209ENST00000488860 VPS51Q9UID3 782 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 CDC23Q9UJX2 597 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 TTC7AQ9ULT0 858 aaPredicted RBP12.59□□□□□ -0.39
TRAIP-209ENST00000488860 SLC27A6Q9Y2P4 619 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 OR51B4Q9Y5P0 310 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 MRFAP1Q9Y605 127 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 ACTL7AQ9Y615 435 aa12.59□□□□□ -0.39
TRAIP-209ENST00000488860 PRRT4C9JH25 899 aa12.58□□□□□ -0.4
TRAIP-209ENST00000488860 J3KR12 359 aa12.58□□□□□ -0.4
TRAIP-209ENST00000488860 PDE2AO00408 941 aaPredicted RBP12.58□□□□□ -0.4
TRAIP-209ENST00000488860 NCAM2O15394 837 aa12.58□□□□□ -0.4
TRAIP-209ENST00000488860 KDELR3O43731 214 aa12.58□□□□□ -0.4
TRAIP-209ENST00000488860 LIASO43766 372 aa12.58□□□□□ -0.4
TRAIP-209ENST00000488860 NEBLO76041 1014 aa12.58□□□□□ -0.4
TRAIP-209ENST00000488860 EGFP01133 1207 aa12.58□□□□□ -0.4
TRAIP-209ENST00000488860 RBP3P10745 1247 aa12.58□□□□□ -0.4
TRAIP-209ENST00000488860 GLULP15104 373 aa12.58□□□□□ -0.4
TRAIP-209ENST00000488860 VAV1P15498 845 aa12.58□□□□□ -0.4
TRAIP-209ENST00000488860 CD72P21854 359 aa12.58□□□□□ -0.4
TRAIP-209ENST00000488860 GRIA2P42262 883 aa12.58□□□□□ -0.4
TRAIP-209ENST00000488860 STK19P49842 368 aaPredicted RBP12.58□□□□□ -0.4
TRAIP-209ENST00000488860 ARF5P84085 180 aa12.58□□□□□ -0.4
TRAIP-209ENST00000488860 C2orf54Q08AI8 447 aa12.58□□□□□ -0.4
TRAIP-209ENST00000488860 GRSF1Q12849 480 aaKnown RBP eCLIP12.58□□□□□ -0.4
TRAIP-209ENST00000488860 TMEM215Q68D42 235 aa12.58□□□□□ -0.4
TRAIP-209ENST00000488860 TIGD7Q6NT04 549 aaPredicted RBP12.58□□□□□ -0.4
TRAIP-209ENST00000488860 DARS2Q6PI48 645 aaKnown RBP12.58□□□□□ -0.4
TRAIP-209ENST00000488860 NUDT18Q6ZVK8 323 aa12.58□□□□□ -0.4
TRAIP-209ENST00000488860 ADIPOR2Q86V24 386 aa12.58□□□□□ -0.4
TRAIP-209ENST00000488860 SUGP1Q8IWZ8 645 aaKnown RBP12.58□□□□□ -0.4
TRAIP-209ENST00000488860 CCDC13Q8IYE1 715 aa12.58□□□□□ -0.4
TRAIP-209ENST00000488860 SIX5Q8N196 739 aa12.58□□□□□ -0.4
TRAIP-209ENST00000488860 USP33Q8TEY7 942 aa12.58□□□□□ -0.4
TRAIP-209ENST00000488860 NSMCE1Q8WV22 266 aa12.58□□□□□ -0.4
TRAIP-209ENST00000488860 TFB1MQ8WVM0 346 aaKnown RBP12.58□□□□□ -0.4
TRAIP-209ENST00000488860 ALG14Q96F25 216 aa12.58□□□□□ -0.4
TRAIP-209ENST00000488860 RPL10LQ96L21 214 aaKnown RBP12.58□□□□□ -0.4
TRAIP-209ENST00000488860 ACE2Q9BYF1 805 aaPredicted RBP12.58□□□□□ -0.4
TRAIP-209ENST00000488860 FBRSL1Q9HCM7 1045 aaKnown RBP12.58□□□□□ -0.4
TRAIP-209ENST00000488860 RNF14Q9UBS8 474 aa12.58□□□□□ -0.4
TRAIP-209ENST00000488860 UBA2Q9UBT2 640 aaPredicted RBP12.58□□□□□ -0.4
TRAIP-209ENST00000488860 DNPEPQ9ULA0 475 aa12.58□□□□□ -0.4
TRAIP-209ENST00000488860 KRBA1A5PL33 1030 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 HACD1B0YJ81 288 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 MAN2B1O00754 1011 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 MAFKO60675 156 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 PRAMEF11O60813 436 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 PHF2O75151 1096 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 ATP5BP06576 529 aaKnown RBP12.57□□□□□ -0.4
TRAIP-209ENST00000488860 PLK1P53350 603 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 ECT2LQ008S8 904 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 PRKCQQ04759 706 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 SULT2A1Q06520 285 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 IL10RBQ08334 325 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 PPIDQ08752 370 aaKnown RBP12.57□□□□□ -0.4
TRAIP-209ENST00000488860 XRCC4Q13426 336 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 EIF4HQ15056 248 aaKnown RBP12.57□□□□□ -0.4
TRAIP-209ENST00000488860 PRKD1Q15139 912 aaPredicted RBP12.57□□□□□ -0.4
TRAIP-209ENST00000488860 WHAMMP3Q1A5X7 153 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 FNDC3BQ53EP0 1204 aaKnown RBP12.57□□□□□ -0.4
TRAIP-209ENST00000488860 SLC45A4Q5BKX6 768 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 HEATR6Q6AI08 1181 aaKnown RBP12.57□□□□□ -0.4
TRAIP-209ENST00000488860 FSTL4Q6MZW2 842 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 RETSATQ6NUM9 610 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 ZNF852Q6ZMS4 543 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 KIAA0907Q7Z7F0 614 aaPredicted RBP12.57□□□□□ -0.4
TRAIP-209ENST00000488860 PRELID2Q8N945 189 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 ATP11CQ8NB49 1132 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 UCMAQ8WVF2 138 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 MAGOHBQ96A72 148 aaKnown RBP12.57□□□□□ -0.4
TRAIP-209ENST00000488860 CEP41Q9BYV8 373 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 FRMD8P1Q9BZ68 369 aaPredicted RBP12.57□□□□□ -0.4
TRAIP-209ENST00000488860 PDFQ9HBH1 243 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 ZDHHC4Q9NPG8 344 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 WNT16Q9UBV4 365 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 ERVW-1Q9UQF0 538 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 TTLL3Q9Y4R7 772 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 CKAP5Q14008 2032 aa12.57□□□□□ -0.4
TRAIP-209ENST00000488860 ZSCAN5CA6NGD5 496 aaPredicted RBP12.56□□□□□ -0.4
TRAIP-209ENST00000488860 SGK1O00141 431 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 KCNK1O00180 336 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 STK25O00506 426 aa12.56□□□□□ -0.4
TRAIP-209ENST00000488860 KCNN4O15554 427 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms