RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, human

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG9A-222	ENST00000488833	SH2D3C	Q8N5H7	860 aa		18.79	■□□□□ 0.6
ATG9A-222	ENST00000488833	C18orf8	Q96DM3	657 aa		18.79	■□□□□ 0.6
ATG9A-222	ENST00000488833	TBCB	Q99426	244 aa		18.79	■□□□□ 0.6
ATG9A-222	ENST00000488833	ELF4	Q99607	663 aa	Predicted RBP	18.79	■□□□□ 0.6
ATG9A-222	ENST00000488833	ANLN	Q9NQW6	1124 aa		18.79	■□□□□ 0.6
ATG9A-222	ENST00000488833	GDF3	Q9NR23	364 aa		18.79	■□□□□ 0.6
ATG9A-222	ENST00000488833	SAMSN1	Q9NSI8	373 aa	Known RBP	18.79	■□□□□ 0.6
ATG9A-222	ENST00000488833	FTSJ1	Q9UET6	329 aa		18.79	■□□□□ 0.6
ATG9A-222	ENST00000488833	SARDH	Q9UL12	918 aa		18.79	■□□□□ 0.6
ATG9A-222	ENST00000488833	TBC1D30	Q9Y2I9	924 aa		18.79	■□□□□ 0.6
ATG9A-222	ENST00000488833	PAXBP1	Q9Y5B6	917 aa		18.79	■□□□□ 0.6
ATG9A-222	ENST00000488833	DMXL2	Q8TDJ6	3036 aa		18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833		A0A1W2PR77	199 aa		18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833	GOLGA8S	H3BPF8	625 aa		18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833		I6L893	689 aa	Predicted RBP	18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833	ALOX15B	O15296	676 aa		18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833	SLC7A4	O43246	635 aa		18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833	SNAP91	O60641	907 aa		18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833	LSM8	O95777	96 aa	Known RBP	18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833	F9	P00740	461 aa		18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833	UCHL3	P15374	230 aa		18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833	SCNN1A	P37088	669 aa		18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833	GABRB2	P47870	512 aa		18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833	KRT83	P78385	493 aa		18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833	CNTN1	Q12860	1018 aa		18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833	SLC45A4	Q5BKX6	768 aa		18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833	NAPEPLD	Q6IQ20	393 aa		18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833	LRRC31	Q6UY01	552 aa		18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833	NOP9	Q86U38	636 aa	Known RBP	18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833	GATAD2A	Q86YP4	633 aa		18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833	MSANTD4	Q8NCY6	345 aa		18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833	PIP4K2C	Q8TBX8	421 aa		18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833	NT5C3B	Q969T7	300 aa		18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833	PGAP3	Q96FM1	320 aa	Predicted RBP	18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833	C2orf49	Q9BVC5	232 aa	Predicted RBP	18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833	NAA15	Q9BXJ9	866 aa	Known RBP	18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833	TAB2	Q9NYJ8	693 aa		18.78	■□□□□ 0.6
ATG9A-222	ENST00000488833	CACNA1G	O43497	2377 aa		18.77	■□□□□ 0.6
ATG9A-222	ENST00000488833		F8VZ95	297 aa		18.77	■□□□□ 0.6
ATG9A-222	ENST00000488833	MCF2L	O15068	1137 aa		18.77	■□□□□ 0.6
ATG9A-222	ENST00000488833	LAT	O43561	262 aa		18.77	■□□□□ 0.6
ATG9A-222	ENST00000488833	PLRG1	O43660	514 aa	Known RBP	18.77	■□□□□ 0.6
ATG9A-222	ENST00000488833	DKK1	O94907	266 aa		18.77	■□□□□ 0.6
ATG9A-222	ENST00000488833	SRC	P12931	536 aa		18.77	■□□□□ 0.6
ATG9A-222	ENST00000488833	MAT2A	P31153	395 aa	Known RBP	18.77	■□□□□ 0.6
ATG9A-222	ENST00000488833	FLT3	P36888	993 aa		18.77	■□□□□ 0.6
ATG9A-222	ENST00000488833	SLC25A52	Q3SY17	297 aa		18.77	■□□□□ 0.6
ATG9A-222	ENST00000488833	C2CD6	Q53TS8	623 aa		18.77	■□□□□ 0.6
ATG9A-222	ENST00000488833	TCP11X2	Q5H9J9	407 aa		18.77	■□□□□ 0.6
ATG9A-222	ENST00000488833	AGBL4	Q5VU57	503 aa		18.77	■□□□□ 0.6
ATG9A-222	ENST00000488833	TMPRSS7	Q7RTY8	843 aa		18.77	■□□□□ 0.6
ATG9A-222	ENST00000488833	PRPF39	Q86UA1	669 aa	Known RBP	18.77	■□□□□ 0.6
ATG9A-222	ENST00000488833	PROSER1	Q86XN7	944 aa		18.77	■□□□□ 0.6
ATG9A-222	ENST00000488833	FAM131C	Q96AQ9	280 aa		18.77	■□□□□ 0.6
ATG9A-222	ENST00000488833	PSMB7	Q99436	277 aa		18.77	■□□□□ 0.6
ATG9A-222	ENST00000488833	KDM4C	Q9H3R0	1056 aa		18.77	■□□□□ 0.6
ATG9A-222	ENST00000488833	TMPRSS4	Q9NRS4	437 aa		18.77	■□□□□ 0.6
ATG9A-222	ENST00000488833	VPS51	Q9UID3	782 aa		18.77	■□□□□ 0.6
ATG9A-222	ENST00000488833	PPM1H	Q9ULR3	514 aa		18.77	■□□□□ 0.6
ATG9A-222	ENST00000488833	HS3ST2	Q9Y278	367 aa		18.77	■□□□□ 0.6
ATG9A-222	ENST00000488833	DOCK4	Q8N1I0	1966 aa		18.76	■□□□□ 0.59
ATG9A-222	ENST00000488833	TAF4	O00268	1085 aa		18.76	■□□□□ 0.59
ATG9A-222	ENST00000488833	YKT6	O15498	198 aa		18.76	■□□□□ 0.59
ATG9A-222	ENST00000488833	MT-CO1	P00395	513 aa		18.76	■□□□□ 0.59
ATG9A-222	ENST00000488833	CAPNS1	P04632	268 aa		18.76	■□□□□ 0.59
ATG9A-222	ENST00000488833	ITGAV	P06756	1048 aa		18.76	■□□□□ 0.59
ATG9A-222	ENST00000488833	MME	P08473	750 aa		18.76	■□□□□ 0.59
ATG9A-222	ENST00000488833	EEF1G	P26641	437 aa	Known RBP	18.76	■□□□□ 0.59
ATG9A-222	ENST00000488833	NXPH1	P58417	271 aa		18.76	■□□□□ 0.59
ATG9A-222	ENST00000488833	NAA35	Q5VZE5	725 aa		18.76	■□□□□ 0.59
ATG9A-222	ENST00000488833	TFAP2D	Q7Z6R9	452 aa		18.76	■□□□□ 0.59
ATG9A-222	ENST00000488833	SETD3	Q86TU7	594 aa	Predicted RBP	18.76	■□□□□ 0.59
ATG9A-222	ENST00000488833	ZNF683	Q8IZ20	524 aa		18.76	■□□□□ 0.59
ATG9A-222	ENST00000488833	ATP11C	Q8NB49	1132 aa		18.76	■□□□□ 0.59
ATG9A-222	ENST00000488833	EPS8L1	Q8TE68	723 aa		18.76	■□□□□ 0.59
ATG9A-222	ENST00000488833	CCDC114	Q96M63	670 aa		18.76	■□□□□ 0.59
ATG9A-222	ENST00000488833	STK33	Q9BYT3	514 aa		18.76	■□□□□ 0.59
ATG9A-222	ENST00000488833	CCDC86	Q9H6F5	360 aa	Known RBP	18.76	■□□□□ 0.59
ATG9A-222	ENST00000488833	MPP6	Q9NZW5	540 aa		18.76	■□□□□ 0.59
ATG9A-222	ENST00000488833	FARP1	Q9Y4F1	1045 aa	Predicted RBP	18.76	■□□□□ 0.59
ATG9A-222	ENST00000488833	DOCK9	Q9BZ29	2069 aa		18.76	■□□□□ 0.59
ATG9A-222	ENST00000488833	FREM2	Q5SZK8	3169 aa		18.75	■□□□□ 0.59
ATG9A-222	ENST00000488833	COL5A1	P20908	1838 aa	Predicted RBP	18.75	■□□□□ 0.59
ATG9A-222	ENST00000488833		E9PAM4	449 aa		18.75	■□□□□ 0.59
ATG9A-222	ENST00000488833	TLR4	O00206	839 aa		18.75	■□□□□ 0.59
ATG9A-222	ENST00000488833	RRM1	P23921	792 aa		18.75	■□□□□ 0.59
ATG9A-222	ENST00000488833	EPHA8	P29322	1005 aa	Predicted RBP	18.75	■□□□□ 0.59
ATG9A-222	ENST00000488833	ARRB1	P49407	418 aa	Predicted RBP	18.75	■□□□□ 0.59
ATG9A-222	ENST00000488833	NOMO3	P69849	1222 aa		18.75	■□□□□ 0.59
ATG9A-222	ENST00000488833	SHB	Q15464	509 aa		18.75	■□□□□ 0.59
ATG9A-222	ENST00000488833	C6orf118	Q5T5N4	469 aa		18.75	■□□□□ 0.59
ATG9A-222	ENST00000488833	TRNP1	Q6NT89	227 aa		18.75	■□□□□ 0.59
ATG9A-222	ENST00000488833	TRIM69	Q86WT6	500 aa		18.75	■□□□□ 0.59
ATG9A-222	ENST00000488833	MARCH9	Q86YJ5	346 aa		18.75	■□□□□ 0.59
ATG9A-222	ENST00000488833	GALNT15	Q8N3T1	639 aa		18.75	■□□□□ 0.59
ATG9A-222	ENST00000488833	DCAF4L2	Q8NA75	395 aa		18.75	■□□□□ 0.59
ATG9A-222	ENST00000488833	CPA5	Q8WXQ8	436 aa		18.75	■□□□□ 0.59
ATG9A-222	ENST00000488833	CFAP57	Q96MR6	1250 aa		18.75	■□□□□ 0.59
ATG9A-222	ENST00000488833	TMEM51	Q9NW97	253 aa		18.75	■□□□□ 0.59
ATG9A-222	ENST00000488833		A0A0D9SEW6	157 aa		18.74	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 116 ms