RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 TMEM110Q86TL2 294 aa12.63□□□□□ -0.39
TTC3-221ENST00000488522 PRPF39Q86UA1 669 aaKnown RBP12.63□□□□□ -0.39
TTC3-221ENST00000488522 CHSY1Q86X52 802 aa12.63□□□□□ -0.39
TTC3-221ENST00000488522 FAM114A1Q8IWE2 563 aa12.63□□□□□ -0.39
TTC3-221ENST00000488522 LGI2Q8N0V4 545 aa12.63□□□□□ -0.39
TTC3-221ENST00000488522 CCAR2Q8N163 923 aaKnown RBP12.63□□□□□ -0.39
TTC3-221ENST00000488522 PPM1KQ8N3J5 372 aa12.63□□□□□ -0.39
TTC3-221ENST00000488522 TMEM145Q8NBT3 493 aa12.63□□□□□ -0.39
TTC3-221ENST00000488522 RPL10LQ96L21 214 aaKnown RBP12.63□□□□□ -0.39
TTC3-221ENST00000488522 FCRL3Q96P31 734 aaPredicted RBP12.63□□□□□ -0.39
TTC3-221ENST00000488522 MIS12Q9H081 205 aa12.63□□□□□ -0.39
TTC3-221ENST00000488522 THAP9Q9H5L6 903 aa12.63□□□□□ -0.39
TTC3-221ENST00000488522 POPDC2Q9HBU9 364 aa12.63□□□□□ -0.39
TTC3-221ENST00000488522 PREBQ9HCU5 417 aa12.63□□□□□ -0.39
TTC3-221ENST00000488522 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.63□□□□□ -0.39
TTC3-221ENST00000488522 TJP2Q9UDY2 1190 aa12.63□□□□□ -0.39
TTC3-221ENST00000488522 PPM1HQ9ULR3 514 aa12.63□□□□□ -0.39
TTC3-221ENST00000488522 CLCA2Q9UQC9 943 aa12.63□□□□□ -0.39
TTC3-221ENST00000488522 OR51B4Q9Y5P0 310 aa12.63□□□□□ -0.39
TTC3-221ENST00000488522 AK5Q9Y6K8 562 aa12.63□□□□□ -0.39
TTC3-221ENST00000488522 TBC1D3DA0A087WVF3 549 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 TBC1D3IA0A087WXS9 549 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 TBC1D3EA0A087X179 549 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 TBC1D3KA0A087X1G2 549 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 TBC1D3FA6NER0 549 aaPredicted RBP12.62□□□□□ -0.39
TTC3-221ENST00000488522 KCNU1A8MYU2 1149 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 TBC1D3LB9A6J9 549 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 F5H5T6 163 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 PRAMEF26H0Y7S4 382 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 BRINP1O60477 761 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 DXOO77932 396 aaKnown RBP12.62□□□□□ -0.39
TTC3-221ENST00000488522 TRUB2O95900 331 aaKnown RBP12.62□□□□□ -0.39
TTC3-221ENST00000488522 MOCS2O96007 188 aaPredicted RBP12.62□□□□□ -0.39
TTC3-221ENST00000488522 TBC1D3HP0C7X1 549 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 VAV1P15498 845 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 ACTN2P35609 894 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 METAP1P53582 386 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 E2F1Q01094 437 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 TLE3Q04726 772 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 MTA1Q13330 715 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 FAM46CQ5VWP2 391 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 TBC1D3GQ6DHY5 549 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 SMYD5Q6GMV2 418 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 TBC1D3CQ6IPX1 549 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.62□□□□□ -0.39
TTC3-221ENST00000488522 CREBRFQ8IUR6 639 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 TBC1D3Q8IZP1 549 aaPredicted RBP12.62□□□□□ -0.39
TTC3-221ENST00000488522 AOPEPQ8N6M6 819 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 ATP6V0D2Q8N8Y2 350 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 OR8D1Q8WZ84 308 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 FAM149B1Q96BN6 582 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 KREMEN1Q96MU8 473 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 ANP32EQ9BTT0 268 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 TSPY26PQ9H489 355 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 SARDHQ9UL12 918 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 CEP83Q9Y592 693 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 RAI2Q9Y5P3 530 aa12.62□□□□□ -0.39
TTC3-221ENST00000488522 SMTNL1A8MU46 457 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 BECN2A8MW95 431 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 TRIM38O00635 465 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 MCF2LO15068 1137 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 RTN2O75298 545 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 PRB1P04280 392 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 GLI1P08151 1106 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 GIMD1P0DJR0 217 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 PDGFRAP16234 1089 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 GLDCP23378 1020 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 MARSP56192 900 aaKnown RBP12.61□□□□□ -0.39
TTC3-221ENST00000488522 TAS2R38P59533 333 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 YWHAZP63104 245 aaKnown RBP12.61□□□□□ -0.39
TTC3-221ENST00000488522 CETN1Q12798 172 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 C5orf22Q49AR2 442 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 SETMARQ53H47 684 aaPredicted RBP12.61□□□□□ -0.39
TTC3-221ENST00000488522 ZC3H12AQ5D1E8 599 aaKnown RBP12.61□□□□□ -0.39
TTC3-221ENST00000488522 RABGAP1LQ5R372 815 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 CDCP2Q5VXM1 449 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 NEK5Q6P3R8 708 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 PCSK4Q6UW60 755 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 GPR155Q7Z3F1 870 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 ARHGEF19Q8IW93 802 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 OR4C6Q8NH72 309 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 HIC2Q96JB3 615 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 SLC2A13Q96QE2 648 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 PPP1R9BQ96SB3 815 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 ASNSD1Q9NWL6 643 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 HS3ST2Q9Y278 367 aa12.61□□□□□ -0.39
TTC3-221ENST00000488522 COL27A1Q8IZC6 1860 aaPredicted RBP12.61□□□□□ -0.39
TTC3-221ENST00000488522 MYO18BQ8IUG5 2567 aa12.6□□□□□ -0.39
TTC3-221ENST00000488522 E5RJQ4 531 aa12.6□□□□□ -0.39
TTC3-221ENST00000488522 C1QTNF3-AMACRE9PGA6 284 aa12.6□□□□□ -0.39
TTC3-221ENST00000488522 CAPN9O14815 690 aa12.6□□□□□ -0.39
TTC3-221ENST00000488522 SIGLEC6O43699 453 aa12.6□□□□□ -0.39
TTC3-221ENST00000488522 CALCAP01258 141 aa12.6□□□□□ -0.39
TTC3-221ENST00000488522 SLC2A3P11169 496 aa12.6□□□□□ -0.39
TTC3-221ENST00000488522 PLA2G2AP14555 144 aa12.6□□□□□ -0.39
TTC3-221ENST00000488522 PITX1P78337 314 aaPredicted RBP12.6□□□□□ -0.39
TTC3-221ENST00000488522 CNTN1Q12860 1018 aa12.6□□□□□ -0.39
TTC3-221ENST00000488522 STAT4Q14765 748 aa12.6□□□□□ -0.39
TTC3-221ENST00000488522 HSP90AA4PQ58FG1 418 aa12.6□□□□□ -0.39
TTC3-221ENST00000488522 PIP5KL1Q5T9C9 394 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms