RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 ACSL4O60488 711 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 RASSF9O75901 435 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 STC2O76061 302 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 AP2A1O95782 977 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 F11P03951 625 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 NDST2P52849 883 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 UNC5AQ6ZN44 842 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 SPRED2Q7Z698 418 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 DENND1CQ8IV53 801 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 CFAP52Q8N1V2 620 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 RIBC1Q8N443 379 aaPredicted RBP20.65■□□□□ 0.9
NECAB3-213ENST00000488489 OXNAD1Q96HP4 312 aaPredicted RBP20.65■□□□□ 0.9
NECAB3-213ENST00000488489 SLC22A12Q96S37 553 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 CYP2S1Q96SQ9 504 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 DHRS4Q9BTZ2 278 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 UBP1Q9NZI7 540 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 MAFFQ9ULX9 164 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 PEX11BO96011 259 aa20.64■□□□□ 0.89
NECAB3-213ENST00000488489 HARS2P49590 506 aaKnown RBP20.64■□□□□ 0.89
NECAB3-213ENST00000488489 SESN2P58004 480 aaPredicted RBP20.64■□□□□ 0.89
NECAB3-213ENST00000488489 CREMQ03060 361 aa20.64■□□□□ 0.89
NECAB3-213ENST00000488489 KBTBD12Q3ZCT8 623 aa20.64■□□□□ 0.89
NECAB3-213ENST00000488489 LACTB2Q53H82 288 aaPredicted RBP20.64■□□□□ 0.89
NECAB3-213ENST00000488489 ITPRIPL1Q6GPH6 555 aa20.64■□□□□ 0.89
NECAB3-213ENST00000488489 LGI2Q8N0V4 545 aa20.64■□□□□ 0.89
NECAB3-213ENST00000488489 ARNTL2Q8WYA1 636 aa20.64■□□□□ 0.89
NECAB3-213ENST00000488489 CHMP6Q96FZ7 201 aa20.64■□□□□ 0.89
NECAB3-213ENST00000488489 PAFAH2Q99487 392 aa20.64■□□□□ 0.89
NECAB3-213ENST00000488489 FETUBQ9UGM5 382 aa20.64■□□□□ 0.89
NECAB3-213ENST00000488489 SLC24A2Q9UI40 661 aa20.64■□□□□ 0.89
NECAB3-213ENST00000488489 TTLL3Q9Y4R7 772 aa20.64■□□□□ 0.89
NECAB3-213ENST00000488489 RASA4BC9J798 803 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 RASA4O43374 803 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 CACNG3O60359 315 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 SUN1O94901 812 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 DNAJB1P25685 340 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 BMPR1AP36894 532 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 ACBD5Q5T8D3 534 aaPredicted RBP20.63■□□□□ 0.89
NECAB3-213ENST00000488489 CPLX4Q7Z7G2 160 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 OR52K1Q8NGK4 314 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 KLHL5Q96PQ7 755 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 TCF25Q9BQ70 676 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 SELENOSQ9BQE4 189 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 KLF16Q9BXK1 252 aaPredicted RBP20.63■□□□□ 0.89
NECAB3-213ENST00000488489 SSX2IPQ9Y2D8 614 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 PDE4DIPQ5VU43 2346 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 HIDE1A8MVS5 230 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 J3KR12 359 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 SPAG6O75602 509 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 MGAT1P26572 445 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 PPP3CCP48454 512 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 KLHL38Q2WGJ6 581 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 C5orf22Q49AR2 442 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 TAOK1Q7L7X3 1001 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 LRRC49Q8IUZ0 686 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 SPATA22Q8NHS9 363 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 CYTH2Q99418 400 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 SLC40A1Q9NP59 571 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 KLC4Q9NSK0 619 aa20.63■□□□□ 0.89
NECAB3-213ENST00000488489 UXTQ9UBK9 157 aaPredicted RBP20.63■□□□□ 0.89
NECAB3-213ENST00000488489 DOCK6Q96HP0 2047 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 SDR42E2A6NKP2 422 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 F5H5T6 163 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 IRF1P10914 325 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 ATP5DP30049 168 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 CORO1AP31146 461 aaKnown RBP20.62■□□□□ 0.89
NECAB3-213ENST00000488489 SLC11A2P49281 568 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 MTA1Q13330 715 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 RASA2Q15283 850 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 ADGRD1Q6QNK2 874 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 SRRM1Q8IYB3 904 aaKnown RBP20.62■□□□□ 0.89
NECAB3-213ENST00000488489 PLD4Q96BZ4 506 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 ZFRQ96KR1 1074 aaKnown RBP20.62■□□□□ 0.89
NECAB3-213ENST00000488489 SMPD4Q9NXE4 827 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 PSMC3IPQ9P2W1 217 aaPredicted RBP20.62■□□□□ 0.89
NECAB3-213ENST00000488489 OBSL1O75147 1896 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 TRDMT1O14717 391 aaKnown RBP20.62■□□□□ 0.89
NECAB3-213ENST00000488489 HLA-DQB2P05538 268 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 OR1E1P30953 314 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 CTNNB1P35222 781 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 NUMBP49757 651 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 ZXDBP98169 803 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 SPRED3Q2MJR0 410 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 TXNDC8Q6A555 127 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 TIGD7Q6NT04 549 aaPredicted RBP20.62■□□□□ 0.89
NECAB3-213ENST00000488489 TRMT10BQ6PF06 316 aaKnown RBP20.62■□□□□ 0.89
NECAB3-213ENST00000488489 GAREM2Q75VX8 874 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 TRABD2AQ86V40 505 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 PHOSPHO2Q8TCD6 241 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 DCAKDQ8WVC6 231 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 STAMBPL1Q96FJ0 436 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 PPCSQ9HAB8 311 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 RBM22Q9NW64 420 aaKnown RBP eCLIP20.62■□□□□ 0.898e-6■■□□□ 12.7
NECAB3-213ENST00000488489 SYBUQ9NX95 663 aa20.62■□□□□ 0.89
NECAB3-213ENST00000488489 CXorf49A8MYA2 514 aaPredicted RBP20.61■□□□□ 0.89
NECAB3-213ENST00000488489 NRG2O14511 850 aaPredicted RBP20.61■□□□□ 0.89
NECAB3-213ENST00000488489 MT-CYBP00156 380 aaPredicted RBP20.61■□□□□ 0.89
NECAB3-213ENST00000488489 CHN1P15882 459 aa20.61■□□□□ 0.89
NECAB3-213ENST00000488489 RPS24P62847 133 aaKnown RBP20.61■□□□□ 0.89
NECAB3-213ENST00000488489 ITIH5Q86UX2 942 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms