RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 PPARGC1AQ9UBK2 798 aaKnown RBP24.32■■□□□ 1.48
RNF38-208ENST00000488058 SERGEFQ9UGK8 458 aa24.32■■□□□ 1.48
RNF38-208ENST00000488058 ATP9BO43861 1147 aa24.31■■□□□ 1.48
RNF38-208ENST00000488058 C7P10643 843 aa24.31■■□□□ 1.48
RNF38-208ENST00000488058 DESP17661 470 aa24.31■■□□□ 1.48
RNF38-208ENST00000488058 PRKCIP41743 596 aa24.31■■□□□ 1.48
RNF38-208ENST00000488058 ZNF143P52747 638 aaPredicted RBP24.31■■□□□ 1.48
RNF38-208ENST00000488058 TDRD12Q587J7 1177 aaKnown RBP24.31■■□□□ 1.48
RNF38-208ENST00000488058 LINGO4Q6UY18 593 aa24.31■■□□□ 1.48
RNF38-208ENST00000488058 SLFN11Q7Z7L1 901 aa24.31■■□□□ 1.48
RNF38-208ENST00000488058 HDDC3Q8N4P3 179 aa24.31■■□□□ 1.48
RNF38-208ENST00000488058 DCAF4L2Q8NA75 395 aa24.31■■□□□ 1.48
RNF38-208ENST00000488058 CPLX3Q8WVH0 158 aa24.31■■□□□ 1.48
RNF38-208ENST00000488058 OSBPL2Q9H1P3 480 aa24.31■■□□□ 1.48
RNF38-208ENST00000488058 PCED1AQ9H1Q7 454 aa24.31■■□□□ 1.48
RNF38-208ENST00000488058 A0A1B0GTW7 788 aa24.3■■□□□ 1.48
RNF38-208ENST00000488058 FAM72CH0Y354 149 aa24.3■■□□□ 1.48
RNF38-208ENST00000488058 CBX4O00257 560 aa24.3■■□□□ 1.48
RNF38-208ENST00000488058 TM4SF5O14894 197 aa24.3■■□□□ 1.48
RNF38-208ENST00000488058 ADH1BP00325 375 aa24.3■■□□□ 1.48
RNF38-208ENST00000488058 MT-CO1P00395 513 aa24.3■■□□□ 1.48
RNF38-208ENST00000488058 SYPP08247 313 aa24.3■■□□□ 1.48
RNF38-208ENST00000488058 PLEKP08567 350 aaPredicted RBP24.3■■□□□ 1.48
RNF38-208ENST00000488058 SRCP12931 536 aa24.3■■□□□ 1.48
RNF38-208ENST00000488058 GLDCP23378 1020 aa24.3■■□□□ 1.48
RNF38-208ENST00000488058 FIGNQ5HY92 759 aa24.3■■□□□ 1.48
RNF38-208ENST00000488058 PPP1R15BQ5SWA1 713 aa24.3■■□□□ 1.48
RNF38-208ENST00000488058 ARTNQ5T4W7 220 aa24.3■■□□□ 1.48
RNF38-208ENST00000488058 FAM72AQ5TYM5 149 aa24.3■■□□□ 1.48
RNF38-208ENST00000488058 FAM72DQ6L9T8 149 aa24.3■■□□□ 1.48
RNF38-208ENST00000488058 DSG4Q86SJ6 1040 aa24.3■■□□□ 1.48
RNF38-208ENST00000488058 FAM72BQ86X60 149 aa24.3■■□□□ 1.48
RNF38-208ENST00000488058 OR2I1PQ8NGU4 316 aa24.3■■□□□ 1.48
RNF38-208ENST00000488058 TBC1D31Q96DN5 1066 aa24.3■■□□□ 1.48
RNF38-208ENST00000488058 VCPIP1Q96JH7 1222 aa24.3■■□□□ 1.48
RNF38-208ENST00000488058 CNPY3Q9BT09 278 aa24.3■■□□□ 1.48
RNF38-208ENST00000488058 NEUROG2Q9H2A3 272 aa24.3■■□□□ 1.48
RNF38-208ENST00000488058 ATP13A1Q9HD20 1204 aa24.3■■□□□ 1.48
RNF38-208ENST00000488058 PCDH15Q96QU1 1955 aa24.3■■□□□ 1.48
RNF38-208ENST00000488058 ILVBLA1L0T0 632 aa24.29■■□□□ 1.48
RNF38-208ENST00000488058 K7ERQ8 282 aa24.29■■□□□ 1.48
RNF38-208ENST00000488058 DDX3XO00571 662 aaKnown RBP eCLIP24.29■■□□□ 1.48
RNF38-208ENST00000488058 ARHGAP33O14559 1287 aa24.29■■□□□ 1.48
RNF38-208ENST00000488058 BCAT2O15382 392 aaPredicted RBP24.29■■□□□ 1.48
RNF38-208ENST00000488058 LRIG2O94898 1065 aa24.29■■□□□ 1.48
RNF38-208ENST00000488058 C5AR1P21730 350 aa24.29■■□□□ 1.48
RNF38-208ENST00000488058 VASPP50552 380 aaPredicted RBP24.29■■□□□ 1.48
RNF38-208ENST00000488058 GNA12Q03113 381 aa24.29■■□□□ 1.48
RNF38-208ENST00000488058 EFHC2Q5JST6 749 aa24.29■■□□□ 1.48
RNF38-208ENST00000488058 MANEALQ5VSG8 457 aa24.29■■□□□ 1.48
RNF38-208ENST00000488058 AADATQ8N5Z0 425 aa24.29■■□□□ 1.48
RNF38-208ENST00000488058 NTAN1Q96AB6 310 aa24.29■■□□□ 1.48
RNF38-208ENST00000488058 BIRC7Q96CA5 298 aa24.29■■□□□ 1.48
RNF38-208ENST00000488058 PARVAQ9NVD7 372 aa24.29■■□□□ 1.48
RNF38-208ENST00000488058 ZNF212Q9UDV6 495 aa24.29■■□□□ 1.48
RNF38-208ENST00000488058 DNAI1Q9UI46 699 aa24.29■■□□□ 1.48
RNF38-208ENST00000488058 HS3ST2Q9Y278 367 aa24.29■■□□□ 1.48
RNF38-208ENST00000488058 ZBTB32Q9Y2Y4 487 aaPredicted RBP24.29■■□□□ 1.48
RNF38-208ENST00000488058 PLK4O00444 970 aa24.28■■□□□ 1.48
RNF38-208ENST00000488058 FTLP02792 175 aaPredicted RBP24.28■■□□□ 1.48
RNF38-208ENST00000488058 RHOQP17081 205 aa24.28■■□□□ 1.48
RNF38-208ENST00000488058 PBX1P40424 430 aa24.28■■□□□ 1.48
RNF38-208ENST00000488058 OGDHQ02218 1023 aa24.28■■□□□ 1.48
RNF38-208ENST00000488058 NRG1Q02297 640 aaPredicted RBP24.28■■□□□ 1.48
RNF38-208ENST00000488058 POM121L1PQ3SYA9 428 aa24.28■■□□□ 1.48
RNF38-208ENST00000488058 ZNF783Q6ZMS7 281 aa24.28■■□□□ 1.48
RNF38-208ENST00000488058 TMC6Q7Z403 805 aa24.28■■□□□ 1.48
RNF38-208ENST00000488058 PYROXD2Q8N2H3 581 aa24.28■■□□□ 1.48
RNF38-208ENST00000488058 MINDY1Q8N5J2 469 aa24.28■■□□□ 1.48
RNF38-208ENST00000488058 ZNF653Q96CK0 615 aa24.28■■□□□ 1.48
RNF38-208ENST00000488058 FZD4Q9ULV1 537 aa24.28■■□□□ 1.48
RNF38-208ENST00000488058 C1QTNF3-AMACRE9PGA6 284 aa24.27■■□□□ 1.48
RNF38-208ENST00000488058 GOT1P17174 413 aa24.27■■□□□ 1.48
RNF38-208ENST00000488058 PSMA2P25787 234 aa24.27■■□□□ 1.48
RNF38-208ENST00000488058 METAP1P53582 386 aa24.27■■□□□ 1.48
RNF38-208ENST00000488058 GALCP54803 685 aa24.27■■□□□ 1.48
RNF38-208ENST00000488058 MAMLD1Q13495 774 aa24.27■■□□□ 1.48
RNF38-208ENST00000488058 FAM46CQ5VWP2 391 aa24.27■■□□□ 1.48
RNF38-208ENST00000488058 KIAA0895LQ68EN5 471 aa24.27■■□□□ 1.48
RNF38-208ENST00000488058 RETSATQ6NUM9 610 aa24.27■■□□□ 1.48
RNF38-208ENST00000488058 NCEH1Q6PIU2 408 aa24.27■■□□□ 1.48
RNF38-208ENST00000488058 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP24.27■■□□□ 1.48
RNF38-208ENST00000488058 OR14C36Q8NHC7 312 aa24.27■■□□□ 1.48
RNF38-208ENST00000488058 CCDC114Q96M63 670 aa24.27■■□□□ 1.48
RNF38-208ENST00000488058 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.27■■□□□ 1.48
RNF38-208ENST00000488058 NDFIP2Q9NV92 336 aa24.27■■□□□ 1.48
RNF38-208ENST00000488058 MYO1AQ9UBC5 1043 aa24.27■■□□□ 1.48
RNF38-208ENST00000488058 CNOT8Q9UFF9 292 aaKnown RBP24.27■■□□□ 1.48
RNF38-208ENST00000488058 FARP1Q9Y4F1 1045 aaPredicted RBP24.27■■□□□ 1.48
RNF38-208ENST00000488058 A0A1W2PQJ5 194 aa24.26■■□□□ 1.47
RNF38-208ENST00000488058 LRRC72A6NJI9 287 aa24.26■■□□□ 1.47
RNF38-208ENST00000488058 SMAD6O43541 496 aaKnown RBP24.26■■□□□ 1.47
RNF38-208ENST00000488058 CREB3O43889 395 aa24.26■■□□□ 1.47
RNF38-208ENST00000488058 OPHN1O60890 802 aa24.26■■□□□ 1.47
RNF38-208ENST00000488058 RTN2O75298 545 aa24.26■■□□□ 1.47
RNF38-208ENST00000488058 GZMAP12544 262 aa24.26■■□□□ 1.47
RNF38-208ENST00000488058 ACVRL1P37023 503 aa24.26■■□□□ 1.47
RNF38-208ENST00000488058 MAPKAPK2P49137 400 aa24.26■■□□□ 1.47
RNF38-208ENST00000488058 NOVA1P51513 510 aaKnown RBP24.26■■□□□ 1.47
RNF38-208ENST00000488058 SCAPQ12770 1279 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms